BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014669
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   119   1e-24
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   107   6e-21
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   107   6e-21
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...   103   8e-20
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...   102   1e-19

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  119 bits (298), Expect = 1e-24
 Identities = 80/222 (36%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
 Frame = +1

Query: 1   YGFGYNAIAKDYQVVRVLSYCAGYRCS---EVEVFSLRSMSWRRVQDAPYNII--PLCGK 165
           +GFGY+++  DY++VR+  +  G + S   EV+V+SLR  SWRR+ D PY +      G 
Sbjct: 149 FGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGV 208

Query: 166 LVNGALHWTGKHYTKSLYSPNSPMLVLAYDMSRESFREVPMPNYKKINFYLE--TLHGYL 339
             NGALHW      +S    N   +V+A D+  E +REV  P YK  NFY++   L G L
Sbjct: 209 FANGALHWVVGENPES----NVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCL 264

Query: 340 C--VNFYSHHSFVETWVMKNYGMKESWTKLFRIKKDSTSPVKATYDWVPLCFINKGSEVL 513
           C   NF      V+ W+MK YG+KESWTKLF + +     +       PL +   G EVL
Sbjct: 265 CFLANFLGER--VDVWMMKEYGVKESWTKLFSVAQYEV--IGFLRSLKPLAYSKSGDEVL 320

Query: 514 LTNDGSFYLYDTINNCVQEIMIP--PQEFNGITTYMESNVPV 633
           + +D     +  +     +  IP  P  F    T++ES + V
Sbjct: 321 IEHDNLDLCWYDLKRKQVKNRIPGIPYSFEA-DTFVESLISV 361


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  107 bits (266), Expect = 6e-21
 Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 6/192 (3%)
 Frame = +1

Query: 1   YGFGYNAIAKDYQVVRVLSYCAGYRCS-EVEVFSLRSMSWRRVQDAPYNIIPL--CGKLV 171
           +G GY+ + +DY+VV V    + Y    +V+V+S+ + SWR++QD P+  +P    GK V
Sbjct: 193 FGLGYDHVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFV 252

Query: 172 NGALHWTGKHYTKSLYSPNSPMLVLAYDMSRESFREVPMPNYKKINFY---LETLHGYLC 342
           +G L+W   H       P+S  ++++ D+ +E++REV  P+Y+K +     L  L G LC
Sbjct: 253 SGTLNWAANHSI----GPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLC 308

Query: 343 VNFYSHHSFVETWVMKNYGMKESWTKLFRIKKDSTSPVKATYDWVPLCFINKGSEVLLTN 522
           +N+    +    W+MK+YG++ESW KL  I      P    + +    +I++  +VLL  
Sbjct: 309 MNYDYKKTHFVVWMMKDYGVRESWVKLVSI---PYVPNPEDFSYSGPYYISENGKVLLMF 365

Query: 523 DGSFYLYDTINN 558
           +    LYD  NN
Sbjct: 366 EFDLILYDPRNN 377


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  107 bits (266), Expect = 6e-21
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
 Frame = +1

Query: 1   YGFGYNAIAKDYQVVRVLSYCA----GYRCSEVEVFSLRSMSWRRVQDAPYNII------ 150
           YGFG++ I +DY+VVR + +      G+   EV+V+SL+S SW+R+ D PY++       
Sbjct: 146 YGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPD 205

Query: 151 --PLC----GKLVNGALHWTGKHYTKSLYSPNSPMLVLAYDMSRESFREVPMPNYKKINF 312
             P C    G   N A+HW      K     N   L++A+D+  E F+ +P P+Y     
Sbjct: 206 YHPRCRRGYGVFANSAVHWKATVVGKG--KENGSDLIVAFDLGAEEFKIIPQPDYSSNEH 263

Query: 313 YLET--LHGYLCVNFYSHHSFVETWVMKNYGMKESWTKLFRIKKDSTSPVKATYDWV--- 477
            +    L G LCV    +   VE WVMK YG+KESWT L  +     + ++    W+   
Sbjct: 264 EMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWTHLCTV----IAQLQVKAFWLHAR 319

Query: 478 PLCFINKGSEVLLTNDGSFYLY 543
           PL +   G ++LL  D  F+++
Sbjct: 320 PLAYSKGGDKILLELDNRFFVW 341


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score =  103 bits (256), Expect = 8e-20
 Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
 Frame = +1

Query: 1    YGFGYNAIAKDYQVV----RVLSYCAGYRCSE--VEVFSLRSMSWRRVQDA--PYNIIPL 156
            YGFGY+A A DY+V+    RV+   AGY   E  V+VFSLR+ SWR +QD+   Y   PL
Sbjct: 762  YGFGYDASADDYKVLKGHTRVVVKEAGYEHHESIVKVFSLRTNSWRTIQDSSPSYLPYPL 821

Query: 157  CGKLVNGALHWTGKHYTKSLYSPNSPMLVLAYDMSRESFREVPMP--NYKKINFYLETLH 330
             G  V+GALHW+ +H  +  YS     L+ ++D++ E F+EVP P    ++  F L  L 
Sbjct: 822  PGIFVHGALHWSARHGIEPDYS-----LIASFDLAAEKFKEVPEPKGEDRQSFFTLGVLR 876

Query: 331  GYLC-VNFYSHHSFVETWVMKNYGMKESWTKLFRIKKDSTSPVKATYDWVPLCFINKGSE 507
            G L  V  Y   +    ++M  Y + +SWTK FR    S + +    + +PLC+   G  
Sbjct: 877  GCLSYVKTYVEGNISAIYMMNKYNVMDSWTKEFRFASPSATALSP--ELLPLCYTKDGVI 934

Query: 508  VLLTNDGSFYLYDTINNCVQEIMIPPQEFN-GITTYMESNV-PVCC*RPSCWKQ 663
             ++ +     L    +  +  + I     N  +  Y+E+ V P C    +  KQ
Sbjct: 935  AMMNSSKELLLCSPKSQMLNVMEITAGHHNFQMIAYLETLVSPYCSNNNNAQKQ 988


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score =  102 bits (254), Expect = 1e-19
 Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
 Frame = +1

Query: 1   YGFGYNAIAKDYQVV---RVLSYCAGY--RCSEVEVFSLRSMSWRRVQDAPYNIIP---L 156
           YGFGY+ ++ +Y+VV   RV  Y +    +  EV+V++L   SW+ +   PY++ P   L
Sbjct: 194 YGFGYDPVSDNYKVVTVLRVFDYSSHILVKSDEVKVYTLGINSWKSISVFPYSVFPVQQL 253

Query: 157 CGKLVNGALHWTGKHYTKSLYSPNSPMLVLAYDMSRESFREVPMPNYKKI---NFYLETL 327
            GK V+G ++W     +K      S   +L+ D+  ES++EV +PNY K+   NF+L  L
Sbjct: 254 SGKCVSGTINWLASKDSKQ-----SKYFILSLDLMNESYQEVSLPNYGKVDACNFHLSVL 308

Query: 328 HGYLCVNFYSHHSFVETWVMKNYGMKESWTKLFRIKKDSTSPVKATYDWVPLCFINKGSE 507
               C+  +S       WVMK YG KESWTKLF I   +  P    Y  +   ++ +  +
Sbjct: 309 RD--CLIMFSGDV---VWVMKEYGNKESWTKLFTISY-NRDPHTIPYSCMKAIYVFEDGQ 362

Query: 508 VLLTND---GSFYLYDTINN 558
           VLL      G +  Y+  NN
Sbjct: 363 VLLNIGGCRGKYIFYNCRNN 382