BLASTX nr result

ID: Coptis24_contig00014651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014651
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   128   8e-28
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218...   128   8e-28
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   127   2e-27
ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus ...   119   5e-25

>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  128 bits (322), Expect = 8e-28
 Identities = 71/133 (53%), Positives = 80/133 (60%)
 Frame = +2

Query: 2    ITKVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSD 181
            ITKVVLP AKSG+E NRIGFVHF++RSSAM +LKNTEKYE+DG VLECSLAKPQ D+ S 
Sbjct: 639  ITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKS- 697

Query: 182  AGSTLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXX 361
             GS  QKSGLLPNYPP +                      QPL                 
Sbjct: 698  GGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPML 757

Query: 362  XXDGRVAYVMQQP 400
              DGR+ YV+QQP
Sbjct: 758  LPDGRIGYVLQQP 770


>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
          Length = 784

 Score =  128 bits (322), Expect = 8e-28
 Identities = 71/133 (53%), Positives = 80/133 (60%)
 Frame = +2

Query: 2   ITKVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSD 181
           ITKVVLP AKSG+E NRIGFVHF++RSSAM +LKNTEKYE+DG VLECSLAKPQ D+ S 
Sbjct: 595 ITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKS- 653

Query: 182 AGSTLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXX 361
            GS  QKSGLLPNYPP +                      QPL                 
Sbjct: 654 GGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPML 713

Query: 362 XXDGRVAYVMQQP 400
             DGR+ YV+QQP
Sbjct: 714 LPDGRIGYVLQQP 726


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  127 bits (319), Expect = 2e-27
 Identities = 70/133 (52%), Positives = 79/133 (59%)
 Frame = +2

Query: 2   ITKVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSD 181
           ITKVVLP AKSG+E +RIGFVHFA+RSSAM +LKNTEKYEIDG VLECSLAKPQ D+ S 
Sbjct: 255 ITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSV 314

Query: 182 AGSTLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXX 361
            GS  QKSGLL +YPP +                      QPL                 
Sbjct: 315 GGSNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPML 374

Query: 362 XXDGRVAYVMQQP 400
             DGR+ YV+QQP
Sbjct: 375 LPDGRIGYVLQQP 387


>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
           vinifera]
          Length = 503

 Score =  127 bits (319), Expect = 2e-27
 Identities = 70/133 (52%), Positives = 79/133 (59%)
 Frame = +2

Query: 2   ITKVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSD 181
           ITKVVLP AKSG+E +RIGFVHFA+RSSAM +LKNTEKYEIDG VLECSLAKPQ D+ S 
Sbjct: 324 ITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSV 383

Query: 182 AGSTLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXX 361
            GS  QKSGLL +YPP +                      QPL                 
Sbjct: 384 GGSNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPML 443

Query: 362 XXDGRVAYVMQQP 400
             DGR+ YV+QQP
Sbjct: 444 LPDGRIGYVLQQP 456


>ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus communis]
           gi|223536903|gb|EEF38541.1| nucleolar phosphoprotein,
           putative [Ricinus communis]
          Length = 489

 Score =  119 bits (298), Expect = 5e-25
 Identities = 79/202 (39%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   ITKVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSD 181
           ITKVVLP AK G+E NRIGFVHFA+RSSAM +LKNTE+YE+DG V+ECSLAKPQ D+ S 
Sbjct: 312 ITKVVLPPAKPGQEKNRIGFVHFAERSSAMKALKNTERYELDGQVVECSLAKPQADQKSV 371

Query: 182 AGSTLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXX 361
             S LQ  GLLP+YPP                      + QPL                 
Sbjct: 372 GVSNLQNPGLLPSYPP--GGGYGLIGGAFGALGAGYGAVAQPLIYGRGPTPAGMAMMPML 429

Query: 362 XXDGRVAYVMQQPXXXXXXXXXXXXXXXXXXXXXXXVQLHTPP-XXXXXXXXXXXXXXXX 538
             DGR+ YV+QQP                       VQ HTPP                 
Sbjct: 430 LPDGRIGYVLQQP----------------------GVQPHTPPSHHRNNSRNSSGVASRS 467

Query: 539 XXXXXXXXXXXDNVRGRKYRPY 604
                      D   GR+YRPY
Sbjct: 468 GGGSGRGRQGNDGSNGRRYRPY 489


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