BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014633
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   531   e-148
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   490   e-136
ref|XP_003603234.1| Pentatricopeptide repeat-containing protein ...   480   e-133
ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containi...   452   e-125
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   452   e-125

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  531 bits (1368), Expect = e-148
 Identities = 258/406 (63%), Positives = 322/406 (79%)
 Frame = +1

Query: 31   DQVRAYAVKVSLLNDVRDVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIV 210
            DQV+AYA K+SL +D  DVF WNK +SE + AG+N  A+ECF+ M   N++ D VT ++V
Sbjct: 851  DQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910

Query: 211  LSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDL 390
            L++  GT+DL++G+Q+    VKSG D D+SVANSL+NMY+KMGC  +AR +F++M+ LDL
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 391  ISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHV 570
            ISWNS+ISSC Q  L +ES+NLF+DLL EGL+PD FTLASVLRACSS+  G  + RQ+HV
Sbjct: 971  ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHV 1030

Query: 571  HAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSK 750
            HA+K G I D FV+T LIDVY KSG+MEEAE +++ ++  DL   NAMM GYI   D  K
Sbjct: 1031 HALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKK 1090

Query: 751  ALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILD 930
            AL LFSLIHK G+KSDQ TLATA  ACG  V+L+QGKQI AH IK GFDSDL V+SGILD
Sbjct: 1091 ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 1150

Query: 931  MYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYT 1110
            MY+KCGDM  A ++F+ I  PDDV WT+MISGCV+NG+ED AL +YH+MR S ++PDEYT
Sbjct: 1151 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 1210

Query: 1111 FATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAKC 1248
            FATLIKA S +TA EQG+Q+HANVIKL+C+SDPFVGTSL+DMYAKC
Sbjct: 1211 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 1256



 Score =  199 bits (505), Expect = 2e-48
 Identities = 112/361 (31%), Positives = 197/361 (54%), Gaps = 3/361 (0%)
 Frame = +1

Query: 64   LLNDVR--DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTND 237
            + ND++  D+  WN  +S    +     ++  F+++    ++ D  T   VL +     D
Sbjct: 961  VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020

Query: 238  -LKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVIS 414
             L + +QI    +K+G   D  VA +LI++Y+K G +  A  +F   ++LDL  WN+++ 
Sbjct: 1021 GLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMF 1080

Query: 415  SCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCI 594
              + G  GK++L LF  +   G + DQ TLA+  +AC  +      G+Q+H HA+K G  
Sbjct: 1081 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVL-LDQGKQIHAHAIKAGFD 1139

Query: 595  GDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLI 774
             D+ V++ ++D+Y K G M  A +V+      D  +  +M++G ++N +  +AL ++  +
Sbjct: 1140 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 1199

Query: 775  HKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDM 954
             +     D++T AT I A      LEQG+Q+ A+VIKL   SD  V + ++DMY KCG++
Sbjct: 1200 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 1259

Query: 955  KGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKAC 1134
            + A  LF  +   +  +W AM+ G  ++G+ + A+ L+  M+  GI PD  +F  ++ AC
Sbjct: 1260 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 1319

Query: 1135 S 1137
            S
Sbjct: 1320 S 1320



 Score =  176 bits (445), Expect = 1e-41
 Identities = 117/397 (29%), Positives = 196/397 (49%), Gaps = 8/397 (2%)
 Frame = +1

Query: 79   RDVFKWNKTMSEYI-----NAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLK 243
            RD+  WN  +  Y      N G  +  L  F  +  S     ++T   VL   + +  L 
Sbjct: 685  RDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLW 744

Query: 244  VGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCV 423
              + +    +K G ++D+ V+ +L+N+Y+K G +  AR +F  M E D++ WN ++   V
Sbjct: 745  AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 804

Query: 424  QGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSV--PHGFYLGRQVHVHAVKLGCIG 597
            Q GL KE+  LF +    GLRPD+F++  +L   S V    G +L  QV  +A KL    
Sbjct: 805  QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLS--- 861

Query: 598  DVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIH 777
               +S    DV+  + ++ E                  + AG     D+  A+  F  ++
Sbjct: 862  ---LSDDNPDVFCWNKKLSE-----------------CLWAG-----DNWGAIECFVNMN 896

Query: 778  KDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMK 957
                  D  TL   + A   +  LE GKQ+    +K G DSD+ V++ +++MY K G   
Sbjct: 897  GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY 956

Query: 958  GASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACS 1137
             A  +F+ +   D + W +MIS C ++  E+ ++ L+  + H G+ PD +T A++++ACS
Sbjct: 957  FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016

Query: 1138 SL-TAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
            SL       +QIH + +K   ++D FV T+LID+Y+K
Sbjct: 1017 SLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSK 1053



 Score =  154 bits (388), Expect = 6e-35
 Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 9/355 (2%)
 Frame = +1

Query: 208  VLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELD 387
            +L +A+ T++L +G+    R+V SG   D  ++N+L+ MY+K G L+ AR +F    E D
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 388  LISWNSVISSCV-----QGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYL 552
            L++WN+++ +         G  +E L+LF  L        + TLA VL+ C +     + 
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLN-SGCLWA 745

Query: 553  GRQVHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYIN 732
               VH +A+K+G   DVFVS AL+++Y K GRM +A L++      D+   N M+ GY+ 
Sbjct: 746  AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805

Query: 733  NQDSSKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGK----QIQAHVIKLGFDS 900
                 +A  LFS  H+ G + D+F++   +N   S V  ++GK    Q+QA+  KL    
Sbjct: 806  LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGV-SEVNWDEGKWLADQVQAYAAKLSLSD 864

Query: 901  DLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMR 1080
            D                             PD   W   +S C+  GD   A+  +  M 
Sbjct: 865  D----------------------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMN 896

Query: 1081 HSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
               I  D  T   ++ A +     E GKQ+H   +K    SD  V  SL++MY+K
Sbjct: 897  GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 951



 Score =  122 bits (306), Expect = 2e-25
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 9/242 (3%)
 Frame = +1

Query: 508  SVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREG 687
            S+LR   S  H   LG+  H   V  G  GD F+S  L+ +Y K G +  A  V+     
Sbjct: 626  SLLRTAIST-HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE 684

Query: 688  FDLGSCNAMMAGYINNQDSS-----KALSLFSLIHKDGKKSDQFTLATAINACGSSVVLE 852
             DL + NA++  Y  + DS+     + L LF L+      + + TLA  +  C +S  L 
Sbjct: 685  RDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLW 744

Query: 853  QGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCV 1032
              + +  + IK+G + D+ VS  ++++Y KCG M+ A LLFD + E D V+W  M+ G V
Sbjct: 745  AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 804

Query: 1033 ENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSSLTAFEQGK----QIHANVIKLECL 1200
            + G E  A  L+ +   SG+ PDE++   ++   S +  +++GK    Q+ A   KL   
Sbjct: 805  QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAYAAKLSLS 863

Query: 1201 SD 1206
             D
Sbjct: 864  DD 865



 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
 Frame = +1

Query: 856  GKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCV- 1032
            GK   A ++  G   D  +S+ +L MY KCG +  A  +FD   E D V W A++     
Sbjct: 640  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699

Query: 1033 ----ENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECL 1200
                 +G+    L L+  +R S       T A ++K C +       + +H   IK+   
Sbjct: 700  SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759

Query: 1201 SDPFVGTSLIDMYAKC 1248
             D FV  +L+++Y+KC
Sbjct: 760  WDVFVSGALVNIYSKC 775


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  490 bits (1261), Expect = e-136
 Identities = 251/408 (61%), Positives = 306/408 (75%), Gaps = 1/408 (0%)
 Frame = +1

Query: 28   IDQVRAYAVKVSLLNDVRDVFKWNKTMSEYINAGENRAALECFLEM-TRSNVECDKVTFV 204
            I+Q++AYA K+   +D  DV  WNK +SEY+ AG   AA++CF+ M T S+V+ D VT V
Sbjct: 933  IEQIQAYATKLFFCDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLV 992

Query: 205  IVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEEL 384
            +VL++A GT DL +G+ I    +KSGFD  +SVANSLINMY+KMG ++ A  +F+ M EL
Sbjct: 993  VVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNEL 1052

Query: 385  DLISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQV 564
            DLISWNS+IS   Q GL KES+NL + LL +GL+PD FTLASVL+ACSS+  G +L +Q+
Sbjct: 1053 DLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQI 1112

Query: 565  HVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDS 744
            HV+  K   I + FVSTALIDVY +SG M EAE +++ +  FDL + NAMM GYI   D 
Sbjct: 1113 HVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDH 1172

Query: 745  SKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGI 924
             K L LF+ +H+ G+  D++TLATA  ACGS V LEQGKQI A  IK G +SDL +SSGI
Sbjct: 1173 DKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGI 1232

Query: 925  LDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDE 1104
            LDMY+KCG+M+   LLFD I  PDDV WT MISGCVENGDED AL +Y QMR SGILPDE
Sbjct: 1233 LDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPDE 1292

Query: 1105 YTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAKC 1248
            YTFATLIKA S LTA EQG+QIHANVIKLEC SDPFVGTSLIDMYAKC
Sbjct: 1293 YTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKC 1340



 Score =  191 bits (484), Expect = 4e-46
 Identities = 113/353 (32%), Positives = 188/353 (53%), Gaps = 1/353 (0%)
 Frame = +1

Query: 82   DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMG-TNDLKVGQQI 258
            D+  WN  +S Y   G  + ++   + + R  ++ D  T   VL +    T  L + +QI
Sbjct: 1053 DLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQI 1112

Query: 259  QCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLG 438
               V K+    +  V+ +LI++Y++ G +  A  IF    + DL +WN+++   +  G  
Sbjct: 1113 HVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDH 1172

Query: 439  KESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTA 618
             + L LF  +  +G   D++TLA+  +AC S+      G+Q+H  A+K G   D+F+S+ 
Sbjct: 1173 DKGLKLFAFMHEKGESCDEYTLATAAKACGSLVR-LEQGKQIHALAIKFGLNSDLFLSSG 1231

Query: 619  LIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSD 798
            ++D+Y K G ME+  L++      D  +   M++G + N D  +ALS++  +   G   D
Sbjct: 1232 ILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPD 1291

Query: 799  QFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFD 978
            ++T AT I A      LEQG+QI A+VIKL   SD  V + ++DMY KCG ++ A  LF 
Sbjct: 1292 EYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFR 1351

Query: 979  GICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACS 1137
             +   + VVW AM+    ++G  + AL L+  M+   I PD+ TF  ++ ACS
Sbjct: 1352 RMDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDKVTFIGVLSACS 1404



 Score =  166 bits (421), Expect = 9e-39
 Identities = 120/399 (30%), Positives = 195/399 (48%), Gaps = 10/399 (2%)
 Frame = +1

Query: 79   RDVFKWNKTMSEYINAGENR-----AALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLK 243
            RD+  WN  +S Y  + E+           F  +    V   K+T   +L   + +  + 
Sbjct: 768  RDLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLSGYVC 827

Query: 244  VGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCV 423
              Q +    VK G + D+ V+ +L+N+Y+K G +  AR +F  M+E D++ WN ++ + V
Sbjct: 828  ASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYV 887

Query: 424  QGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGR----QVHVHAVKLGC 591
            + GL KE+L+ F      GLRPD  ++  V+   S V  G+  GR    Q+  +A KL  
Sbjct: 888  EMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEV--GYDTGRRYIEQIQAYATKLFF 945

Query: 592  IGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSL 771
              D   +T ++ ++ K           K+ E    G+  A +  +IN   SS        
Sbjct: 946  CDD---NTDVV-MWNK-----------KLSEYLQAGAFWAAVDCFINMLTSSHV------ 984

Query: 772  IHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGD 951
                  K D  TL   + A   +  L  GK I    +K GFDS + V++ +++MY K G 
Sbjct: 985  ------KYDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGF 1038

Query: 952  MKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKA 1131
            +  A  +F G+ E D + W +MIS   +NG +  ++ L   +   G+ PD +T A+++KA
Sbjct: 1039 VSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKA 1098

Query: 1132 CSSLT-AFEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
            CSSLT      KQIH  V K   +++ FV T+LID+Y++
Sbjct: 1099 CSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVYSR 1137



 Score =  137 bits (344), Expect = 7e-30
 Identities = 72/253 (28%), Positives = 130/253 (51%)
 Frame = +1

Query: 82   DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQIQ 261
            D+  WN  M  YI  G++   L+ F  M      CD+ T      +      L+ G+QI 
Sbjct: 1155 DLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIH 1214

Query: 262  CRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLGK 441
               +K G + D+ +++ +++MY K G +     +F  +   D ++W  +IS CV+ G   
Sbjct: 1215 ALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDED 1274

Query: 442  ESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTAL 621
             +L+++  +   G+ PD++T A++++A S +      GRQ+H + +KL C  D FV T+L
Sbjct: 1275 RALSVYRQMRLSGILPDEYTFATLIKASSCLT-ALEQGRQIHANVIKLECASDPFVGTSL 1333

Query: 622  IDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSDQ 801
            ID+Y K G +E+A  +++  +  ++   NAM+     +    +AL LF ++     K D+
Sbjct: 1334 IDMYAKCGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDK 1393

Query: 802  FTLATAINACGSS 840
             T    ++AC  S
Sbjct: 1394 VTFIGVLSACSHS 1406



 Score =  127 bits (319), Expect = 6e-27
 Identities = 102/361 (28%), Positives = 168/361 (46%), Gaps = 15/361 (4%)
 Frame = +1

Query: 208  VLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELD 387
            +L +A+ T++L +G+ I   ++ SG   D  +AN+LI MY+K G ++ AR +F    + D
Sbjct: 710  LLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDRD 769

Query: 388  LISWNSVISSCVQGGLGK-----ESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYL 552
            L++WN+V+S+  +    +     E  ++F  L    +   + TLA +L+ C  +  G+  
Sbjct: 770  LVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLC--LLSGYVC 827

Query: 553  GRQ-VHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYI 729
              Q VH +AVK+G   DVFVS AL+++Y K G + EA  ++ I +  D+   N M+  Y+
Sbjct: 828  ASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYV 887

Query: 730  NNQDSSKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGK----QIQAHVIKLGFD 897
                  +ALS FS  H+ G + D  ++   ++   S V  + G+    QIQA+  KL F 
Sbjct: 888  EMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGI-SEVGYDTGRRYIEQIQAYATKLFFC 946

Query: 898  SDLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALW----- 1062
             D                              D V+W   +S  ++ G    A W     
Sbjct: 947  DD----------------------------NTDVVMWNKKLSEYLQAG----AFWAAVDC 974

Query: 1063 LYHQMRHSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYA 1242
              + +  S +  D  T   ++ A +       GK IH   +K    S   V  SLI+MY+
Sbjct: 975  FINMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYS 1034

Query: 1243 K 1245
            K
Sbjct: 1035 K 1035



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 50/155 (32%), Positives = 81/155 (52%)
 Frame = +1

Query: 76   VRDVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQ 255
            V D   W   +S  +  G+   AL  + +M  S +  D+ TF  ++ ++     L+ G+Q
Sbjct: 1254 VPDDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPDEYTFATLIKASSCLTALEQGRQ 1313

Query: 256  IQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGL 435
            I   V+K     D  V  SLI+MYAK G +  A  +F  M+  +++ WN+++ S  Q G 
Sbjct: 1314 IHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGH 1373

Query: 436  GKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPH 540
            G+E+L+LF  +    ++PD+ T   VL ACS   H
Sbjct: 1374 GEEALHLFKVMQSHSIKPDKVTFIGVLSACSHSGH 1408


>ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492282|gb|AES73485.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  480 bits (1235), Expect = e-133
 Identities = 238/409 (58%), Positives = 305/409 (74%)
 Frame = +1

Query: 22   KSIDQVRAYAVKVSLLNDVRDVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTF 201
            + ++QVRAYA K+ + +D  DV  WNKT+S Y+ AGE   A++CF +M +S V CD +T+
Sbjct: 241  RELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTY 300

Query: 202  VIVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEE 381
            +++LS     N L++G+QI   VV+ G+D  +SVANS INMY K G +NYAR +F +M+E
Sbjct: 301  IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360

Query: 382  LDLISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQ 561
            +DLISWN+VIS C + GL + SL LF+DLL  GL PDQFT+ SVLRACSS+   + +GRQ
Sbjct: 361  VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQ 420

Query: 562  VHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQD 741
            VH  A+K G + D FVSTALIDVY K G+MEEAEL++  ++GFDL S NAMM G+  + +
Sbjct: 421  VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 742  SSKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSG 921
              +AL LFSL+H+ G+K+DQ T A A  A G  V L+QGKQI A VIK+ F  DL V SG
Sbjct: 481  YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540

Query: 922  ILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPD 1101
            ILDMY+KCG+MK A  +F+ I  PDDV WT +ISGCVENG+E+ AL+ YHQMR +G+ PD
Sbjct: 541  ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 1102 EYTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAKC 1248
            EYTFATL+KACS LTA EQGKQIHAN++KL C  DPFV TSL+DMYAKC
Sbjct: 601  EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKC 649



 Score =  186 bits (472), Expect = 1e-44
 Identities = 106/353 (30%), Positives = 185/353 (52%), Gaps = 1/353 (0%)
 Frame = +1

Query: 82   DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLK-VGQQI 258
            D+  WN  +S    +G    +L  F+++ RS +  D+ T   VL +     +   VG+Q+
Sbjct: 362  DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 259  QCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLG 438
                +K+G   D  V+ +LI++Y+K G +  A  +F   +  DL SWN+++         
Sbjct: 422  HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 439  KESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTA 618
            +E+L LF  +   G + DQ T A+  +A   +      G+Q+H   +K+    D+FV + 
Sbjct: 482  REALRLFSLMHERGEKADQITFANAAKAAGCLVR-LQQGKQIHAVVIKMRFHYDLFVISG 540

Query: 619  LIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSD 798
            ++D+Y K G M+ A  V+      D  +   +++G + N +  +AL  +  +   G + D
Sbjct: 541  ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 799  QFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFD 978
            ++T AT + AC     LEQGKQI A+++KL    D  V + ++DMY KCG+++ A  LF 
Sbjct: 601  EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 979  GICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACS 1137
             +      +W AMI G  ++G+ + AL  +++M+  G+ PD  TF  ++ ACS
Sbjct: 661  RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713



 Score =  160 bits (406), Expect = 5e-37
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 7/396 (1%)
 Frame = +1

Query: 79   RDVFKWNKTMSEYINAGE------NRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDL 240
            RD+  +N  ++ Y + GE         A   F  + +S +   + T   +    +     
Sbjct: 79   RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138

Query: 241  KVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSC 420
               + +Q   VK G  +D+ VA +L+N+YAK   +  AR +F  M   D++ WN ++ + 
Sbjct: 139  SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198

Query: 421  VQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGD 600
            V+ G G E L LF      GLRPD  ++ ++L              QV  +A KL     
Sbjct: 199  VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL----- 253

Query: 601  VFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHK 780
                                   +   +  D+   N  ++ Y+   +  +A+  F  + K
Sbjct: 254  -----------------------FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIK 290

Query: 781  DGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKG 960
                 D  T    ++   S   LE GKQI   V++ G+D  + V++  ++MYVK G +  
Sbjct: 291  SRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNY 350

Query: 961  ASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSS 1140
            A  +F  + E D + W  +ISGC  +G E+ +L L+  +  SG+LPD++T  ++++ACSS
Sbjct: 351  ARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS 410

Query: 1141 L-TAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
            L  ++  G+Q+H   +K   + D FV T+LID+Y+K
Sbjct: 411  LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK 446



 Score =  149 bits (376), Expect = 1e-33
 Identities = 86/325 (26%), Positives = 169/325 (52%), Gaps = 2/325 (0%)
 Frame = +1

Query: 82   DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQIQ 261
            D+  WN  M  +  +   R AL  F  M     + D++TF     +A     L+ G+QI 
Sbjct: 464  DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523

Query: 262  CRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLGK 441
              V+K  F +D+ V + +++MY K G +  AR +F+++   D ++W +VIS CV+ G  +
Sbjct: 524  AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583

Query: 442  ESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTAL 621
            ++L  +  +   G++PD++T A++++ACS +      G+Q+H + +KL C  D FV T+L
Sbjct: 584  QALFTYHQMRLAGVQPDEYTFATLVKACSLLT-ALEQGKQIHANIMKLNCAFDPFVMTSL 642

Query: 622  IDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSDQ 801
            +D+Y K G +E+A  +++      +   NAM+ G   + ++ +AL+ F+ +   G   D+
Sbjct: 643  VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702

Query: 802  FTLATAINACG-SSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFD 978
             T    ++AC  S +  +  K   +     G + ++   S ++D   + G ++ A  +  
Sbjct: 703  VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762

Query: 979  GI-CEPDDVVWTAMISGCVENGDED 1050
             +  E    ++  +++ C   GD++
Sbjct: 763  SMPFEASATMYRTLLNACRVQGDKE 787



 Score =  120 bits (301), Expect = 7e-25
 Identities = 95/356 (26%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
 Frame = +1

Query: 208  VLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIF--SEMEE 381
            +L  A+  +DL +G++    +V SG + D  V N+LI MYAK G L  AR +F  +   +
Sbjct: 19   ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78

Query: 382  LDLISWNSVISSCVQGG------LGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHG 543
             DL+++N+++++    G         E+ ++F  L    +   + TL+ + + C  + +G
Sbjct: 79   RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC--LLYG 136

Query: 544  FYLGRQ-VHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMA 720
                 + +  +AVK+G   DVFV+ AL+++Y K  R+ EA +++      D+   N MM 
Sbjct: 137  SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196

Query: 721  GYINNQDSSKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQG-KQIQAHVIKLGFD 897
             Y+      + L LFS  H+ G + D  ++ T +   G   V E+  +Q++A+  KL   
Sbjct: 197  AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL--- 253

Query: 898  SDLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQM 1077
                           C D            + D  VW   +S  ++ G+   A+  +  M
Sbjct: 254  -------------FVCDD------------DSDVTVWNKTLSSYLQAGEGWEAVDCFRDM 288

Query: 1078 RHSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
              S +  D  T+  ++   +SL   E GKQIH  V++        V  S I+MY K
Sbjct: 289  IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK 344


>ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  452 bits (1164), Expect = e-125
 Identities = 226/408 (55%), Positives = 296/408 (72%), Gaps = 1/408 (0%)
 Frame = +1

Query: 28   IDQVRAYAVKVSLLNDV-RDVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFV 204
            + Q +AYA K+ + +D   DV  WNK +S ++  GE   A++CF++M  S V CD +TFV
Sbjct: 880  LKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFV 939

Query: 205  IVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEEL 384
            ++L+   G N L++G+QI   V++SG D  +SV N LINMY K G ++ AR++F +M E+
Sbjct: 940  VMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV 999

Query: 385  DLISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQV 564
            DLISWN++IS C   GL + S+ +F+ LL + L PDQFT+ASVLRACSS+  G+YL  Q+
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQI 1059

Query: 565  HVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDS 744
            H  A+K G + D FVSTALIDVY K G+MEEAE ++  ++GFDL S NA+M GYI + D 
Sbjct: 1060 HACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDF 1119

Query: 745  SKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGI 924
             KAL L+ L+ + G++SDQ TL  A  A G  V L+QGKQI A V+K GF+ DL V+SG+
Sbjct: 1120 PKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGV 1179

Query: 925  LDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDE 1104
            LDMY+KCG+M+ A  +F  I  PDDV WT MISGCVENG E+HAL+ YHQMR S + PDE
Sbjct: 1180 LDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239

Query: 1105 YTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAKC 1248
            YTFATL+KACS LTA EQG+QIHAN++KL C  DPFV TSL+DMYAKC
Sbjct: 1240 YTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKC 1287



 Score =  180 bits (456), Expect = 8e-43
 Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 1/358 (0%)
 Frame = +1

Query: 67   LNDVRDVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTND-LK 243
            +N+V D+  WN  +S    +G    ++  F+ + R ++  D+ T   VL +         
Sbjct: 996  MNEV-DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054

Query: 244  VGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCV 423
            +  QI    +K+G   D  V+ +LI++Y+K G +  A  +F   +  DL SWN+++   +
Sbjct: 1055 LATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYI 1114

Query: 424  QGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDV 603
              G   ++L L++ +   G R DQ TL +  +A   +  G   G+Q+H   VK G   D+
Sbjct: 1115 VSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLV-GLKQGKQIHAVVVKRGFNLDL 1173

Query: 604  FVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKD 783
            FV++ ++D+Y K G ME A  V+      D  +   M++G + N     AL  +  +   
Sbjct: 1174 FVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLS 1233

Query: 784  GKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGA 963
              + D++T AT + AC     LEQG+QI A+++KL    D  V + ++DMY KCG+++ A
Sbjct: 1234 KVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1293

Query: 964  SLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACS 1137
              LF          W AMI G  ++G+   AL  +  M+  G++PD  TF  ++ ACS
Sbjct: 1294 RGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACS 1351



 Score =  164 bits (414), Expect = 6e-38
 Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 2/318 (0%)
 Frame = +1

Query: 82   DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQIQ 261
            D+  WN  M  YI +G+   AL  ++ M  S    D++T V    +A G   LK G+QI 
Sbjct: 1102 DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIH 1161

Query: 262  CRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLGK 441
              VVK GF+ D+ V + +++MY K G +  AR +FSE+   D ++W ++IS CV+ G  +
Sbjct: 1162 AVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEE 1221

Query: 442  ESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVSTAL 621
             +L  +  +    ++PD++T A++++ACS +      GRQ+H + VKL C  D FV T+L
Sbjct: 1222 HALFTYHQMRLSKVQPDEYTFATLVKACSLLT-ALEQGRQIHANIVKLNCAFDPFVMTSL 1280

Query: 622  IDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSDQ 801
            +D+Y K G +E+A  ++K      + S NAM+ G   + ++ +AL  F  +   G   D+
Sbjct: 1281 VDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDR 1340

Query: 802  FTLATAINACG-SSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFD 978
             T    ++AC  S +V E  +   +     G + ++   S ++D   + G ++ A  +  
Sbjct: 1341 VTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVIS 1400

Query: 979  GI-CEPDDVVWTAMISGC 1029
             +  E    ++  +++ C
Sbjct: 1401 SMPFEASASMYRTLLNAC 1418



 Score =  155 bits (391), Expect = 3e-35
 Identities = 107/391 (27%), Positives = 181/391 (46%), Gaps = 2/391 (0%)
 Frame = +1

Query: 79   RDVFKWNKTMSEYI-NAGENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQ 255
            RD+  WN  +S    +A ++      F  + RS V   + T   V    + +      + 
Sbjct: 722  RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781

Query: 256  IQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGL 435
            +    VK G  +D+ VA +L+N+YAK G +  AR +F  M   D++ WN ++ + V   L
Sbjct: 782  LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841

Query: 436  GKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDVFVST 615
              E++ LF +    G RPD  TL ++ R      +   L +Q   +A KL    D     
Sbjct: 842  EYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILEL-KQFKAYATKLFMYDD----- 895

Query: 616  ALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKS 795
                                  +G D+   N  ++ ++   ++ +A+  F  +       
Sbjct: 896  ----------------------DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933

Query: 796  DQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLF 975
            D  T    +        LE GKQI   V++ G D  + V + +++MYVK G +  A  +F
Sbjct: 934  DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993

Query: 976  DGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSSLT-AF 1152
              + E D + W  MISGC  +G E+ ++ ++  +    +LPD++T A++++ACSSL   +
Sbjct: 994  GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGY 1053

Query: 1153 EQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
                QIHA  +K   + D FV T+LID+Y+K
Sbjct: 1054 YLATQIHACAMKAGVVLDSFVSTALIDVYSK 1084



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
 Frame = +1

Query: 550  LGRQVHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGF--DLGSCNAMMAG 723
            LG++ H   +  G   D FV+  LI +Y K G +  A  ++        DL + NA+++ 
Sbjct: 674  LGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733

Query: 724  YINNQDSSK-ALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDS 900
               + D S     LF L+ +    + + TLA     C  S      + +  + +K+G   
Sbjct: 734  LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793

Query: 901  DLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMR 1080
            D+ V+  ++++Y K G ++ A +LFDG+   D V+W  M+   V+   E  A+ L+ +  
Sbjct: 794  DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853

Query: 1081 HSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECLSD 1206
             +G  PD+ T  TL +         + KQ  A   KL    D
Sbjct: 854  RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDD 895



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
 Frame = +1

Query: 847  LEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFDGICEP--DDVVWTAMI 1020
            L  GK+  A ++  G   D  V++ ++ MY KCG +  A  LFD   +   D V W A++
Sbjct: 672  LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731

Query: 1021 SGCVENGDEDH-ALWLYHQMRHSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLEC 1197
            S    + D+ H    L+  +R S +    +T A + K C    +    + +H   +K+  
Sbjct: 732  SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791

Query: 1198 LSDPFVGTSLIDMYAK 1245
              D FV  +L+++YAK
Sbjct: 792  QWDVFVAGALVNIYAK 807


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  452 bits (1163), Expect = e-125
 Identities = 236/417 (56%), Positives = 299/417 (71%), Gaps = 2/417 (0%)
 Frame = +1

Query: 4    VSEELSKSIDQVRAYAVKVSLLNDVRDVFKWNKTMSEYINAGENRAALECFLEMTRSNVE 183
            VS    +  +QV+AYA+K+   +   ++F WNK ++E+++AG+  AA++CF  + RS + 
Sbjct: 832  VSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891

Query: 184  CDKVTFVIVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAI 363
             D VT VI+LS+A+G +DL +G+QI   V+KS F   + V+NSL+NMY+K G +  A   
Sbjct: 892  HDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951

Query: 364  FSEMEELDLISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHG 543
            F    ELDLISWN++ISS  Q  L  E++  F DLL +GL+PDQFTLASVLRACS+   G
Sbjct: 952  FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011

Query: 544  FY--LGRQVHVHAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMM 717
             Y  LG QVHV+A+K G I D FVSTALID+Y K G+M+EAE +   +  FDL S NA+M
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIM 1071

Query: 718  AGYINNQDSSKALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFD 897
             GYI +  S KAL  FSL+H+ G   D+ TLATAI A G  + L+QGKQIQA+ IKLGF+
Sbjct: 1072 FGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131

Query: 898  SDLCVSSGILDMYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQM 1077
            +DL VSSG+LDMY+KCGDM  A  LF  I  PD+V WT MISG +ENGDEDHAL +YH M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 1078 RHSGILPDEYTFATLIKACSSLTAFEQGKQIHANVIKLECLSDPFVGTSLIDMYAKC 1248
            R SG+ PDEYTFATLIKA S LTA EQGKQIHANV+KL+   D FVGTSL+DMY KC
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248



 Score =  193 bits (491), Expect = 7e-47
 Identities = 118/376 (31%), Positives = 198/376 (52%), Gaps = 5/376 (1%)
 Frame = +1

Query: 46   YAVKVSLLNDVR-DVFKWNKTMSEYINAGENRAALECFLEMTRSNVECDKVTFVIVLSSA 222
            YA + + +N    D+  WN  +S Y        A+  F ++ R  ++ D+ T   VL  A
Sbjct: 946  YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR-A 1004

Query: 223  MGTND----LKVGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDL 390
              T D      +G Q+    +K G   D  V+ +LI++Y+K G ++ A  +     + DL
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064

Query: 391  ISWNSVISSCVQGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHV 570
             SWN+++   ++    +++L  F  +   G+  D+ TLA+ ++A   + +    G+Q+  
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN-LKQGKQIQA 1123

Query: 571  HAVKLGCIGDVFVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSK 750
            +A+KLG   D++VS+ ++D+Y K G M  A  ++      D  +   M++GYI N D   
Sbjct: 1124 YAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDH 1183

Query: 751  ALSLFSLIHKDGKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILD 930
            ALS++ L+   G + D++T AT I A      LEQGKQI A+V+KL +  D  V + ++D
Sbjct: 1184 ALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVD 1243

Query: 931  MYVKCGDMKGASLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYT 1110
            MY KCG ++ A  +F  +     V W AM+ G  ++G  D AL L+  M+ +GI PD+ T
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVT 1303

Query: 1111 FATLIKACSSLTAFEQ 1158
            F  ++ ACS    F +
Sbjct: 1304 FIGVLSACSHSGLFSE 1319



 Score =  143 bits (361), Expect = 8e-32
 Identities = 100/397 (25%), Positives = 176/397 (44%), Gaps = 8/397 (2%)
 Frame = +1

Query: 79   RDVFKWNKTMSEYINAGENR-----AALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLK 243
            RD+  WN  ++ Y    ++           F  +        ++T   +L   + +  ++
Sbjct: 675  RDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ 734

Query: 244  VGQQIQCRVVKSGFDFDISVANSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCV 423
            V + +    VK GF+ D+ V+ +L+N+Y K G +  AR +F +M E D + WN ++ + V
Sbjct: 735  VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYV 794

Query: 424  QGGLGKESLNLFLDLLCEGLRPDQFTLASVLRACSSVPHGFYLGRQVHVHAVKLGCIGDV 603
            +     E+L  F      G  PD   L  V+   +S        R+ H   VK       
Sbjct: 795  ENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSN---NRKRHAEQVK------- 844

Query: 604  FVSTALIDVYGKSGRMEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKD 783
                              A  ++   +G ++ + N  +  +++      A+  F  + + 
Sbjct: 845  ----------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS 888

Query: 784  GKKSDQFTLATAINACGSSVVLEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGA 963
                D  TL   ++A   +  L+ G+QI A VIK  F   + VS+ +++MY K G +  A
Sbjct: 889  TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948

Query: 964  SLLFDGICEPDDVVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSSL 1143
               F    E D + W  MIS   +N  E  A+  +  +   G+ PD++T A++++ACS+ 
Sbjct: 949  EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG 1008

Query: 1144 TA---FEQGKQIHANVIKLECLSDPFVGTSLIDMYAK 1245
                 F  G Q+H   IK   ++D FV T+LID+Y+K
Sbjct: 1009 DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSK 1045



 Score =  123 bits (308), Expect = 1e-25
 Identities = 108/382 (28%), Positives = 173/382 (45%), Gaps = 11/382 (2%)
 Frame = +1

Query: 133  NRAALEC-FLEMTR-SNVECDKVTFVIVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVA 306
            +R +  C FL   R S++      +  +L SA+   DLK+G++   R+V SG   D  + 
Sbjct: 590  SRTSFACPFLLFCRFSSLSSSSSQWFSLLRSAIAMADLKLGKRAHARIVTSGDLPDRYLT 649

Query: 307  NSLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLGK-----ESLNLFLDLL 471
            N+LI MY+K G L  AR +F +  + DL++WNS++++  Q          E   LF  L 
Sbjct: 650  NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLR 709

Query: 472  CEGLRPDQFTLASVLRACSSVPHGF-YLGRQVHVHAVKLGCIGDVFVSTALIDVYGKSGR 648
              G    + TLA +L+ C  +  GF  +   VH +AVK+G   D+FVS AL+++Y K G 
Sbjct: 710  EFGFSITRLTLAPLLKLC--LLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767

Query: 649  MEEAELVYKIREGFDLGSCNAMMAGYINNQDSSKALSLFSLIHKDGKKSDQFTLATAINA 828
            + +A L++      D    N M+  Y+ N    +AL  FS  H+ G   D   L   I  
Sbjct: 768  VGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGG 827

Query: 829  CGSSVV---LEQGKQIQAHVIKLGFDSDLCVSSGILDMYVKCGDMKGASLLFDGICEPDD 999
              S V        +Q++A+ +K+ F  D                 +G+++          
Sbjct: 828  VNSDVSNNRKRHAEQVKAYAMKM-FPFD-----------------QGSNIF--------- 860

Query: 1000 VVWTAMISGCVENGDEDHALWLYHQMRHSGILPDEYTFATLIKACSSLTAFEQGKQIHAN 1179
              W   ++  +  G    A+  +  +  S I  D  T   ++ A       + G+QIHA 
Sbjct: 861  -AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHAL 919

Query: 1180 VIKLECLSDPFVGTSLIDMYAK 1245
            VIK        V  SL++MY+K
Sbjct: 920  VIKSSFAPVVPVSNSLMNMYSK 941



 Score =  102 bits (255), Expect = 2e-19
 Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 30/242 (12%)
 Frame = +1

Query: 34   QVRAYAVKVSLLNDV----------------------------RDVFKWNKTMSEYINAG 129
            Q++AYA+K+   ND+                             D   W   +S YI  G
Sbjct: 1120 QIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENG 1179

Query: 130  ENRAALECFLEMTRSNVECDKVTFVIVLSSAMGTNDLKVGQQIQCRVVKSGFDFDISVAN 309
            +   AL  +  M  S V+ D+ TF  ++ ++     L+ G+QI   VVK  +  D  V  
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239

Query: 310  SLINMYAKMGCLNYARAIFSEMEELDLISWNSVISSCVQGGLGKESLNLFLDLLCEGLRP 489
            SL++MY K G +  A  +F +M+   ++ WN+++    Q G   E+LNLF  +   G++P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299

Query: 490  DQFTLASVLRACSSVPHGFYLGRQVHVHAV--KLGCIGDVFVSTALIDVYGKSGRMEEAE 663
            D+ T   VL ACS    G +     +  A+    G   ++   + L+D  G++GR++EAE
Sbjct: 1300 DKVTFIGVLSACSH--SGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357

Query: 664  LV 669
             V
Sbjct: 1358 NV 1359