BLASTX nr result

ID: Coptis24_contig00014626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014626
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527695.1| glutaredoxin-1, grx1, putative [Ricinus comm...   183   4e-44
ref|XP_002325236.1| glutaredoxin C4 [Populus trichocarpa] gi|118...   178   1e-42
gb|AAL90750.1| glutaredoxin [Populus tremula x Populus tremuloides]   177   3e-42
sp|Q0DAE4.2|GRXC8_ORYSJ RecName: Full=Glutaredoxin-C8; AltName: ...   176   4e-42
emb|CBI17872.3| unnamed protein product [Vitis vinifera]              176   4e-42

>ref|XP_002527695.1| glutaredoxin-1, grx1, putative [Ricinus communis]
           gi|223532926|gb|EEF34694.1| glutaredoxin-1, grx1,
           putative [Ricinus communis]
          Length = 140

 Score =  183 bits (464), Expect = 4e-44
 Identities = 88/122 (72%), Positives = 108/122 (88%), Gaps = 2/122 (1%)
 Frame = -1

Query: 665 ALVFLFTTSLY--TSARASHSSFVKKTVSSHHIVIFSKSYCPYCRRAKAVFKELNQSPHI 492
           A + +  TSL   ++A  S S+FVKKT+SSH IVIFSKSYCPYC+RAKAVFK+LNQ PH+
Sbjct: 19  ATITVIATSLSWASAATGSDSAFVKKTISSHKIVIFSKSYCPYCKRAKAVFKQLNQIPHV 78

Query: 491 IELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGVAKKD 312
           +ELDERDDG ++QDALS++VGRRTVPQVF++GKHIGGSDDTVEA+ESG+LA+LLG+A KD
Sbjct: 79  VELDERDDGQNIQDALSKIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELADLLGIAGKD 138

Query: 311 DL 306
           DL
Sbjct: 139 DL 140


>ref|XP_002325236.1| glutaredoxin C4 [Populus trichocarpa] gi|118483557|gb|ABK93676.1|
           unknown [Populus trichocarpa]
           gi|118488597|gb|ABK96111.1| unknown [Populus
           trichocarpa] gi|222866670|gb|EEF03801.1| glutaredoxin C4
           [Populus trichocarpa]
          Length = 136

 Score =  178 bits (452), Expect = 1e-42
 Identities = 85/128 (66%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
 Frame = -1

Query: 683 SRMANLALVFLFTTSLYTSARASHSSFVKKTVSSHHIVIFSKSYCPYCRRAKAVFKELNQ 504
           S +A    + +   SL  +A +  ++FVKKT+SSH IVIFSKSYCPYC++AK VFKELNQ
Sbjct: 9   SILATAVTLTVLAASLTWAAGSPEATFVKKTISSHQIVIFSKSYCPYCKKAKGVFKELNQ 68

Query: 503 SPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGV 324
           +PH++ELD+R+DG D+QDA+SE+VGRRTVPQVF++GKHIGGSDDTVEA+ESG+LA+LLGV
Sbjct: 69  TPHVVELDQREDGHDIQDAMSEIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELAKLLGV 128

Query: 323 A--KKDDL 306
           A  +KDDL
Sbjct: 129 ASEQKDDL 136


>gb|AAL90750.1| glutaredoxin [Populus tremula x Populus tremuloides]
          Length = 139

 Score =  177 bits (448), Expect = 3e-42
 Identities = 84/127 (66%), Positives = 108/127 (85%), Gaps = 2/127 (1%)
 Frame = -1

Query: 683 SRMANLALVFLFTTSLYTSARASHSSFVKKTVSSHHIVIFSKSYCPYCRRAKAVFKELNQ 504
           S +A    + +   SL  +A +  ++FVKKT+SSH IVIFSKSYCPYC++AK VFKELNQ
Sbjct: 9   SILATAVTLTVLAASLTWAAGSPEATFVKKTISSHQIVIFSKSYCPYCKKAKGVFKELNQ 68

Query: 503 SPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGV 324
           +PH++ELD+R+DG D+QDA+SE+VGRRTVPQVF++GKHIGGSDDTVEA+ESG+LA+LLGV
Sbjct: 69  TPHVVELDQREDGHDIQDAMSEIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELAKLLGV 128

Query: 323 A--KKDD 309
           A  +KDD
Sbjct: 129 ASEQKDD 135


>sp|Q0DAE4.2|GRXC8_ORYSJ RecName: Full=Glutaredoxin-C8; AltName: Full=Glutaredoxin-C4
           homolog gi|51536174|dbj|BAD38347.1| putative
           glutaredoxin [Oryza sativa Japonica Group]
           gi|52077363|dbj|BAD46403.1| putative glutaredoxin [Oryza
           sativa Japonica Group] gi|125556349|gb|EAZ01955.1|
           hypothetical protein OsI_23986 [Oryza sativa Indica
           Group] gi|125598104|gb|EAZ37884.1| hypothetical protein
           OsJ_22233 [Oryza sativa Japonica Group]
          Length = 136

 Score =  176 bits (447), Expect = 4e-42
 Identities = 86/133 (64%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
 Frame = -1

Query: 698 MMSRRSRMANLALVFLFTTSLYTSARASHSSFVKKTVSSHHIVIFSKSYCPYCRRAKAVF 519
           ++ RR  MA  AL+ L       S  AS SSFVK TV +H +VIFSKSYCPYCRRAKAVF
Sbjct: 4   LLGRRFGMAAAALIALAALGSAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVF 63

Query: 518 KELN--QSPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGK 345
           KEL   + P+++ELD+R+DGW++QDALS++VGRRTVPQVFV+GKH+GGSDDTVEA+ESGK
Sbjct: 64  KELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGK 123

Query: 344 LAELLGVAKKDDL 306
           LA+LL +  K+DL
Sbjct: 124 LAKLLNIDVKEDL 136


>emb|CBI17872.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  176 bits (447), Expect = 4e-42
 Identities = 86/124 (69%), Positives = 106/124 (85%), Gaps = 8/124 (6%)
 Frame = -1

Query: 659 VFLFTTSLY--TSARASHSS------FVKKTVSSHHIVIFSKSYCPYCRRAKAVFKELNQ 504
           +F+ T SL   +SA A HSS      FVKKT+SSH I IFSKSYCPYC+RAKAVFKELNQ
Sbjct: 9   LFVLTASLCLPSSAAADHSSSDAAADFVKKTISSHKIAIFSKSYCPYCKRAKAVFKELNQ 68

Query: 503 SPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGV 324
            P+++ELD+R+DGW++QDALS +VGRRTVPQVF+NGKHIGGSDDTVEA++SG LA+LLG+
Sbjct: 69  VPYVVELDQREDGWNIQDALSGMVGRRTVPQVFINGKHIGGSDDTVEAYQSGDLAKLLGI 128

Query: 323 AKKD 312
           A++D
Sbjct: 129 AEED 132


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