BLASTX nr result
ID: Coptis24_contig00014615
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014615 (635 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera] 80 4e-13 ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450... 79 7e-13 emb|CBI23583.3| unnamed protein product [Vitis vinifera] 73 4e-11 ref|XP_002314639.1| predicted protein [Populus trichocarpa] gi|2... 60 4e-07 ref|XP_002337171.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera] Length = 104 Score = 79.7 bits (195), Expect = 4e-13 Identities = 45/112 (40%), Positives = 64/112 (57%) Frame = -3 Query: 537 MAGSQEKRPNSGDDEQKKRSSRLQKRAPASIQVQPASGFSSEWKVXXXXXXXXXXXXXXX 358 MA + + RP++G + ++ SRLQ+RAP+S+Q+ PA+ +WKV Sbjct: 1 MADTSQTRPSAGVN--RRPPSRLQRRAPSSLQISPAA----DWKVAIPLLSPLATSPSSP 54 Query: 357 XPKDHTLDIKLSSAMQESRQDGQIDKPSFKLWQHPAAPFHYEPTPFKQSFVP 202 D T ++K +E RQ + +KP FK WQHPAAPF YEP F +SFVP Sbjct: 55 KLIDRTAEVK---PKEEPRQTKEGEKPVFKKWQHPAAPFCYEPASFVRSFVP 103 >ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Vitis vinifera] Length = 104 Score = 79.0 bits (193), Expect = 7e-13 Identities = 45/112 (40%), Positives = 64/112 (57%) Frame = -3 Query: 537 MAGSQEKRPNSGDDEQKKRSSRLQKRAPASIQVQPASGFSSEWKVXXXXXXXXXXXXXXX 358 MA + + RP++G + ++ SRLQ+RAP+S+Q+ PA+ +WKV Sbjct: 1 MADTSQTRPSAGVN--RRPPSRLQRRAPSSLQISPAA----DWKVAIPLLSPLATSPSSP 54 Query: 357 XPKDHTLDIKLSSAMQESRQDGQIDKPSFKLWQHPAAPFHYEPTPFKQSFVP 202 D T ++K +E RQ + +KP FK WQHPAAPF YEP F +SFVP Sbjct: 55 KLIDRTAEVK---PKEEPRQMKEGEKPVFKKWQHPAAPFCYEPASFVRSFVP 103 >emb|CBI23583.3| unnamed protein product [Vitis vinifera] Length = 1287 Score = 73.2 bits (178), Expect = 4e-11 Identities = 40/96 (41%), Positives = 54/96 (56%) Frame = -3 Query: 489 KKRSSRLQKRAPASIQVQPASGFSSEWKVXXXXXXXXXXXXXXXXPKDHTLDIKLSSAMQ 310 ++ SRLQ+RAP+S+Q+ PA+ +WKV D T ++K + Sbjct: 1198 RRPPSRLQRRAPSSLQISPAA----DWKVAIPLLSPLATSPSSPKLIDRTAEVK---PKE 1250 Query: 309 ESRQDGQIDKPSFKLWQHPAAPFHYEPTPFKQSFVP 202 E RQ + +KP FK WQHPAAPF YEP F +SFVP Sbjct: 1251 EPRQMKEGEKPVFKKWQHPAAPFCYEPASFVRSFVP 1286 >ref|XP_002314639.1| predicted protein [Populus trichocarpa] gi|222863679|gb|EEF00810.1| predicted protein [Populus trichocarpa] Length = 107 Score = 59.7 bits (143), Expect = 4e-07 Identities = 40/104 (38%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Frame = -3 Query: 510 NSGDDEQKKRSSRLQKRAPASIQVQPASGFSSEWKVXXXXXXXXXXXXXXXXPKDHTLDI 331 NS + + SRLQ+R PAS+Q+ PAS SS WKV +D+ Sbjct: 7 NSNSAAARSQPSRLQRRRPASLQISPASSSSSCWKV-------AIPLLSPLITSPTAMDM 59 Query: 330 KLSSAMQ--ESRQDGQIDKP-SFKLWQHPAAPFHYEPTPFKQSF 208 K Q Q + +KP F WQHPAAP YEP FK SF Sbjct: 60 KSREDPQPPPRSQGTEGEKPVVFTKWQHPAAPLCYEPAKFKPSF 103 >ref|XP_002337171.1| predicted protein [Populus trichocarpa] gi|222838402|gb|EEE76767.1| predicted protein [Populus trichocarpa] Length = 94 Score = 57.4 bits (137), Expect = 2e-06 Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 3/97 (3%) Frame = -3 Query: 489 KKRSSRLQKRAPASIQVQPASGFSSEWKVXXXXXXXXXXXXXXXXPKDHTLDIKLSSAMQ 310 + + SRLQ+R PAS+Q+ PAS SS WKV +D+K Q Sbjct: 1 RSQPSRLQRRRPASLQISPASSSSSCWKV-------AIPLLSPLITSPTAMDMKSREDPQ 53 Query: 309 --ESRQDGQIDKP-SFKLWQHPAAPFHYEPTPFKQSF 208 Q + +KP F WQHPAAP YEP FK SF Sbjct: 54 PPPRSQGTEGEKPVVFTKWQHPAAPLCYEPAKFKPSF 90