BLASTX nr result

ID: Coptis24_contig00014602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014602
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ52382.1| plastid transcriptionally active 7 [Wolffia austr...    67   2e-09
ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244...    61   1e-07
ref|NP_001143846.1| uncharacterized protein LOC100276635 [Zea ma...    60   1e-07
ref|XP_002321986.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002458375.1| hypothetical protein SORBIDRAFT_03g032400 [S...    58   7e-07

>gb|AEZ52382.1| plastid transcriptionally active 7 [Wolffia australiana]
          Length = 163

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -1

Query: 148 LSITAQEKYPSSSNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2
           LS  A+E   +S  N++RVWRRRKLTKKDEK+ YKMD IPFLEE+VRKI
Sbjct: 33  LSARAEE---TSGGNEKRVWRRRKLTKKDEKVRYKMDRIPFLEEQVRKI 78


>ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244197 [Vitis vinifera]
           gi|297738342|emb|CBI27543.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 100 RRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2
           RRVWRRRKLTKKD+ L YKMD IPFLEEKVRKI
Sbjct: 46  RRVWRRRKLTKKDDMLRYKMDRIPFLEEKVRKI 78


>ref|NP_001143846.1| uncharacterized protein LOC100276635 [Zea mays]
           gi|195628258|gb|ACG35959.1| hypothetical protein [Zea
           mays]
          Length = 185

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
 Frame = -1

Query: 148 LSITAQEKYPSSSNNQ-----------RRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2
           +SI AQ+K  S S +            RRVWRRRKLTK+D+ L YK+D IPFLEEKVRK+
Sbjct: 40  ISIRAQKKSNSDSGSSSGGGDVRTSSGRRVWRRRKLTKEDDMLRYKLDRIPFLEEKVRKV 99


>ref|XP_002321986.1| predicted protein [Populus trichocarpa] gi|222868982|gb|EEF06113.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/53 (52%), Positives = 36/53 (67%)
 Frame = -1

Query: 160 CCFNLSITAQEKYPSSSNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2
           C F        K   +S+  RRVWRRRKLTK+D+ L YK++ +PFLEE+VRKI
Sbjct: 21  CSFPEKSQVVSKLQKNSSRGRRVWRRRKLTKEDDLLRYKLERVPFLEEQVRKI 73


>ref|XP_002458375.1| hypothetical protein SORBIDRAFT_03g032400 [Sorghum bicolor]
           gi|241930350|gb|EES03495.1| hypothetical protein
           SORBIDRAFT_03g032400 [Sorghum bicolor]
          Length = 186

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1

Query: 112 SNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2
           +++ RRVWRRRKLTK+D+ L YK+D IPFLEEKVRK+
Sbjct: 64  ASSGRRVWRRRKLTKEDDMLRYKLDRIPFLEEKVRKV 100


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