BLASTX nr result
ID: Coptis24_contig00014602
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014602 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEZ52382.1| plastid transcriptionally active 7 [Wolffia austr... 67 2e-09 ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244... 61 1e-07 ref|NP_001143846.1| uncharacterized protein LOC100276635 [Zea ma... 60 1e-07 ref|XP_002321986.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 ref|XP_002458375.1| hypothetical protein SORBIDRAFT_03g032400 [S... 58 7e-07 >gb|AEZ52382.1| plastid transcriptionally active 7 [Wolffia australiana] Length = 163 Score = 66.6 bits (161), Expect = 2e-09 Identities = 34/49 (69%), Positives = 40/49 (81%) Frame = -1 Query: 148 LSITAQEKYPSSSNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2 LS A+E +S N++RVWRRRKLTKKDEK+ YKMD IPFLEE+VRKI Sbjct: 33 LSARAEE---TSGGNEKRVWRRRKLTKKDEKVRYKMDRIPFLEEQVRKI 78 >ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244197 [Vitis vinifera] gi|297738342|emb|CBI27543.3| unnamed protein product [Vitis vinifera] Length = 165 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/33 (87%), Positives = 30/33 (90%) Frame = -1 Query: 100 RRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2 RRVWRRRKLTKKD+ L YKMD IPFLEEKVRKI Sbjct: 46 RRVWRRRKLTKKDDMLRYKMDRIPFLEEKVRKI 78 >ref|NP_001143846.1| uncharacterized protein LOC100276635 [Zea mays] gi|195628258|gb|ACG35959.1| hypothetical protein [Zea mays] Length = 185 Score = 60.5 bits (145), Expect = 1e-07 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 11/60 (18%) Frame = -1 Query: 148 LSITAQEKYPSSSNNQ-----------RRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2 +SI AQ+K S S + RRVWRRRKLTK+D+ L YK+D IPFLEEKVRK+ Sbjct: 40 ISIRAQKKSNSDSGSSSGGGDVRTSSGRRVWRRRKLTKEDDMLRYKLDRIPFLEEKVRKV 99 >ref|XP_002321986.1| predicted protein [Populus trichocarpa] gi|222868982|gb|EEF06113.1| predicted protein [Populus trichocarpa] Length = 160 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/53 (52%), Positives = 36/53 (67%) Frame = -1 Query: 160 CCFNLSITAQEKYPSSSNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2 C F K +S+ RRVWRRRKLTK+D+ L YK++ +PFLEE+VRKI Sbjct: 21 CSFPEKSQVVSKLQKNSSRGRRVWRRRKLTKEDDLLRYKLERVPFLEEQVRKI 73 >ref|XP_002458375.1| hypothetical protein SORBIDRAFT_03g032400 [Sorghum bicolor] gi|241930350|gb|EES03495.1| hypothetical protein SORBIDRAFT_03g032400 [Sorghum bicolor] Length = 186 Score = 58.2 bits (139), Expect = 7e-07 Identities = 26/37 (70%), Positives = 33/37 (89%) Frame = -1 Query: 112 SNNQRRVWRRRKLTKKDEKLGYKMD*IPFLEEKVRKI 2 +++ RRVWRRRKLTK+D+ L YK+D IPFLEEKVRK+ Sbjct: 64 ASSGRRVWRRRKLTKEDDMLRYKLDRIPFLEEKVRKV 100