BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014594
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...   352   1e-94
ref|XP_002326313.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
dbj|BAF02935.1| RAD51 homolog [Populus nigra]                         352   1e-94
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...   351   2e-94
ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly...   350   5e-94

>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score =  352 bits (904), Expect = 1e-94
 Identities = 180/202 (89%), Positives = 193/202 (95%), Gaps = 1/202 (0%)
 Frame = -3

Query: 963 HLILL*TKLPLDQGGGHGKAMYIDAEGTFRPQRLLQIADRFGMNGPDVLDNVAYARAYNT 784
           H + +  +LPLDQGGG GKAMYIDAEGTFRPQRLLQIADRFG+NG DVL+NVAYARAYNT
Sbjct: 139 HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNT 198

Query: 783 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 604
           DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD
Sbjct: 199 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 258

Query: 603 EFGVAVVITNQVVAKVDGN-MFGGPQITPIGGNIMAHASTTRLSVRKGKGDERICKVISS 427
           EFGVAVVITNQVVA+VDG+ +F GPQI PIGGNIMAHASTTRL++RKG+G+ERICKVISS
Sbjct: 259 EFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISS 318

Query: 426 PCLAEAEARFQISAEGVTDVKE 361
           PCLAEAEARFQISAEGVTDVK+
Sbjct: 319 PCLAEAEARFQISAEGVTDVKD 340



 Score =  111 bits (278), Expect(2) = 2e-43
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = -1

Query: 1175 ELDKILEGGIETGSITELYGEFRGGKTQLCHTLCVTCQLPLDQGGGHGKAMYID 1014
            ELDKILEGGIETGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGGG GKAMYID
Sbjct: 109  ELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 162



 Score = 92.0 bits (227), Expect(2) = 2e-43
 Identities = 46/52 (88%), Positives = 50/52 (96%)
 Frame = -3

Query: 1416 TVESVAYSPRKELLQIKGISENKVDKIIEAASKLVPLGFTSASEIHAQRLEL 1261
            TVESVAYSPRKELLQIKGISE KVDKIIEAASK+VPLGFTSA ++HAQRLE+
Sbjct: 49   TVESVAYSPRKELLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEI 100


>ref|XP_002326313.1| predicted protein [Populus trichocarpa] gi|222833506|gb|EEE71983.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  352 bits (904), Expect = 1e-94
 Identities = 180/202 (89%), Positives = 193/202 (95%), Gaps = 1/202 (0%)
 Frame = -3

Query: 963 HLILL*TKLPLDQGGGHGKAMYIDAEGTFRPQRLLQIADRFGMNGPDVLDNVAYARAYNT 784
           H + +  +LPLDQGGG GKAMYIDAEGTFRPQRLLQIADRFG+NG DVL+NVAYARAYNT
Sbjct: 147 HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNT 206

Query: 783 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 604
           DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD
Sbjct: 207 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 266

Query: 603 EFGVAVVITNQVVAKVDGN-MFGGPQITPIGGNIMAHASTTRLSVRKGKGDERICKVISS 427
           EFGVAVVITNQVVA+VDG+ +F GPQI PIGGNIMAHASTTRL++RKG+G+ERICKVISS
Sbjct: 267 EFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISS 326

Query: 426 PCLAEAEARFQISAEGVTDVKE 361
           PCLAEAEARFQISAEGVTDVK+
Sbjct: 327 PCLAEAEARFQISAEGVTDVKD 348



 Score = 95.5 bits (236), Expect(2) = 2e-29
 Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 15/69 (21%)
 Frame = -1

Query: 1175 ELDKILEGGIE---------------TGSITELYGEFRGGKTQLCHTLCVTCQLPLDQGG 1041
            ELDKILEG  +               TGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGG
Sbjct: 102  ELDKILEGKYQRFLSTLNNDPITLDSTGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGG 161

Query: 1040 GHGKAMYID 1014
            G GKAMYID
Sbjct: 162  GEGKAMYID 170



 Score = 61.6 bits (148), Expect(2) = 2e-29
 Identities = 35/52 (67%), Positives = 39/52 (75%)
 Frame = -3

Query: 1416 TVESVAYSPRKELLQIKGISENKVDKIIEAASKLVPLGFTSASEIHAQRLEL 1261
            TVESVA+SPRKELLQIKGISE KVDKIIEA           AS++HAQR E+
Sbjct: 51   TVESVAFSPRKELLQIKGISEAKVDKIIEAG---------IASQLHAQRQEI 93


>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
          Length = 342

 Score =  352 bits (904), Expect = 1e-94
 Identities = 180/202 (89%), Positives = 193/202 (95%), Gaps = 1/202 (0%)
 Frame = -3

Query: 963 HLILL*TKLPLDQGGGHGKAMYIDAEGTFRPQRLLQIADRFGMNGPDVLDNVAYARAYNT 784
           H + +  +LPLDQGGG GKAMYIDAEGTFRPQRLLQIADRFG+NG DVL+NVAYARAYNT
Sbjct: 141 HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNT 200

Query: 783 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 604
           DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD
Sbjct: 201 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 260

Query: 603 EFGVAVVITNQVVAKVDGN-MFGGPQITPIGGNIMAHASTTRLSVRKGKGDERICKVISS 427
           EFGVAVVITNQVVA+VDG+ +F GPQI PIGGNIMAHASTTRL++RKG+G+ERICKVISS
Sbjct: 261 EFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISS 320

Query: 426 PCLAEAEARFQISAEGVTDVKE 361
           PCLAEAEARFQISAEGVTDVK+
Sbjct: 321 PCLAEAEARFQISAEGVTDVKD 342



 Score =  111 bits (277), Expect(2) = 9e-43
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = -1

Query: 1175 ELDKILEGGIETGSITELYGEFRGGKTQLCHTLCVTCQLPLDQGGGHGKAMYID 1014
            ELDKILEGG+ETGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGGG GKAMYID
Sbjct: 111  ELDKILEGGVETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164



 Score = 90.5 bits (223), Expect(2) = 9e-43
 Identities = 46/52 (88%), Positives = 50/52 (96%)
 Frame = -3

Query: 1416 TVESVAYSPRKELLQIKGISENKVDKIIEAASKLVPLGFTSASEIHAQRLEL 1261
            TVESVA+SPRKELLQIKGISE KVDKIIEAASKLVPLGFTSAS++HAQR E+
Sbjct: 51   TVESVAFSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRQEI 102


>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  351 bits (901), Expect = 2e-94
 Identities = 179/202 (88%), Positives = 193/202 (95%), Gaps = 1/202 (0%)
 Frame = -3

Query: 963 HLILL*TKLPLDQGGGHGKAMYIDAEGTFRPQRLLQIADRFGMNGPDVLDNVAYARAYNT 784
           H + +  +LPLDQGGG GKAMYIDAEGTFRPQRLLQIADRFG+NG DVL+NVAYARAYNT
Sbjct: 136 HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNT 195

Query: 783 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 604
           DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD
Sbjct: 196 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 255

Query: 603 EFGVAVVITNQVVAKVDGN-MFGGPQITPIGGNIMAHASTTRLSVRKGKGDERICKVISS 427
           EFGVAVVITNQVVA+VDG+ +F GPQI PIGGNIMAHASTTRL++RKG+G+ERICKVISS
Sbjct: 256 EFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISS 315

Query: 426 PCLAEAEARFQISAEGVTDVKE 361
           PCLAEA+ARFQISAEGVTDVK+
Sbjct: 316 PCLAEADARFQISAEGVTDVKD 337



 Score =  110 bits (276), Expect(2) = 2e-43
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = -1

Query: 1175 ELDKILEGGIETGSITELYGEFRGGKTQLCHTLCVTCQLPLDQGGGHGKAMYID 1014
            ELDKILEGG+ETGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGGG GKAMYID
Sbjct: 106  ELDKILEGGLETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 159



 Score = 92.8 bits (229), Expect(2) = 2e-43
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -3

Query: 1416 TVESVAYSPRKELLQIKGISENKVDKIIEAASKLVPLGFTSASEIHAQRLEL 1261
            TVESVAYSPRK+LLQIKGISE KVDKI+EAASKLVPLGFTSAS++HAQRLE+
Sbjct: 46   TVESVAYSPRKDLLQIKGISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEI 97


>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
           gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
           repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
           LeRAD51 [Solanum lycopersicum]
          Length = 342

 Score =  350 bits (898), Expect = 5e-94
 Identities = 177/202 (87%), Positives = 192/202 (95%), Gaps = 1/202 (0%)
 Frame = -3

Query: 963 HLILL*TKLPLDQGGGHGKAMYIDAEGTFRPQRLLQIADRFGMNGPDVLDNVAYARAYNT 784
           H + +  +LPLDQGGG GKAMYIDAEGTFRPQRLLQIADR+G+NGPDVL+NVAYARAYNT
Sbjct: 141 HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGPDVLENVAYARAYNT 200

Query: 783 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 604
           DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD
Sbjct: 201 DHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLAD 260

Query: 603 EFGVAVVITNQVVAKVDGN-MFGGPQITPIGGNIMAHASTTRLSVRKGKGDERICKVISS 427
           EFGVAVVITNQVVA+VDG+ +F GPQI PIGGNIMAHASTTRL++RKG+ +ERICKV+SS
Sbjct: 261 EFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHASTTRLALRKGRAEERICKVVSS 320

Query: 426 PCLAEAEARFQISAEGVTDVKE 361
           PCLAEAEARFQIS EGVTDVK+
Sbjct: 321 PCLAEAEARFQISVEGVTDVKD 342



 Score =  110 bits (275), Expect(2) = 7e-43
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = -1

Query: 1175 ELDKILEGGIETGSITELYGEFRGGKTQLCHTLCVTCQLPLDQGGGHGKAMYID 1014
            ELDKILEGGIETGSITE+YGEFR GKTQLCHTLCVTCQLPLDQGGG GKAMYID
Sbjct: 111  ELDKILEGGIETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164



 Score = 91.7 bits (226), Expect(2) = 7e-43
 Identities = 46/52 (88%), Positives = 50/52 (96%)
 Frame = -3

Query: 1416 TVESVAYSPRKELLQIKGISENKVDKIIEAASKLVPLGFTSASEIHAQRLEL 1261
            TVESV Y+PRKELLQIKGISE KVDKIIEAASKLVPLGFTSAS++HAQRLE+
Sbjct: 51   TVESVVYAPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEI 102