BLASTX nr result

ID: Coptis24_contig00014588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014588
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like...    55   6e-06
emb|CBI16549.3| unnamed protein product [Vitis vinifera]               54   1e-05

>ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|222834987|gb|EEE73436.1|
           predicted protein [Populus trichocarpa]
          Length = 1014

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -1

Query: 309 DFPDLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLK 133
           D P L N+++L IL++S+NNF G+IPP            L   N    I  +LRNL+ L 
Sbjct: 402 DLPLLGNLTQLIILDLSSNNFSGQIPPSLSNLTQLIYLVLSSNNFSGQIPQSLRNLTQLT 461

Query: 132 ILDLSENNFSGRIP 91
            LDLS NNF+G+IP
Sbjct: 462 FLDLSSNNFNGQIP 475


>ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g17230-like [Vitis
           vinifera]
          Length = 290

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -1

Query: 300 DLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLKILD 124
           ++RN+SKL++L++S NNF G IPP            L   ++   +   + NLS L+ L 
Sbjct: 176 EIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSLHYNSLSGKVPKEIGNLSKLQRLS 235

Query: 123 LSENNFSGRIPP 88
           LS NNFSG IPP
Sbjct: 236 LSGNNFSGSIPP 247


>emb|CBI16549.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -1

Query: 300 DLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLKILD 124
           ++RN+SKL++L++S NNF G IPP            L   ++   +   + NLS L+ L 
Sbjct: 327 EIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSLDYNSLSGKVPKEIGNLSKLQRLS 386

Query: 123 LSENNFSGRIPP 88
           LS NNFSG IPP
Sbjct: 387 LSGNNFSGSIPP 398


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