BLASTX nr result
ID: Coptis24_contig00014588
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014588 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like... 55 6e-06 emb|CBI16549.3| unnamed protein product [Vitis vinifera] 54 1e-05 >ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|222834987|gb|EEE73436.1| predicted protein [Populus trichocarpa] Length = 1014 Score = 58.2 bits (139), Expect = 7e-07 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = -1 Query: 309 DFPDLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLK 133 D P L N+++L IL++S+NNF G+IPP L N I +LRNL+ L Sbjct: 402 DLPLLGNLTQLIILDLSSNNFSGQIPPSLSNLTQLIYLVLSSNNFSGQIPQSLRNLTQLT 461 Query: 132 ILDLSENNFSGRIP 91 LDLS NNF+G+IP Sbjct: 462 FLDLSSNNFNGQIP 475 >ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230-like [Vitis vinifera] Length = 290 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -1 Query: 300 DLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLKILD 124 ++RN+SKL++L++S NNF G IPP L ++ + + NLS L+ L Sbjct: 176 EIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSLHYNSLSGKVPKEIGNLSKLQRLS 235 Query: 123 LSENNFSGRIPP 88 LS NNFSG IPP Sbjct: 236 LSGNNFSGSIPP 247 >emb|CBI16549.3| unnamed protein product [Vitis vinifera] Length = 441 Score = 54.3 bits (129), Expect = 1e-05 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -1 Query: 300 DLRNVSKLKILNVSNNNFLGRIPPXXXXXXXXXXXXLRQTNIKDSI-SNLRNLSMLKILD 124 ++RN+SKL++L++S NNF G IPP L ++ + + NLS L+ L Sbjct: 327 EIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSLDYNSLSGKVPKEIGNLSKLQRLS 386 Query: 123 LSENNFSGRIPP 88 LS NNFSG IPP Sbjct: 387 LSGNNFSGSIPP 398