BLASTX nr result

ID: Coptis24_contig00014580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014580
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like ...   124   6e-27
emb|CBI17867.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab...   120   9e-26
ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|33265...   117   1e-24

>ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like [Vitis vinifera]
          Length = 137

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/99 (59%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   APKWVLSNLDALKFDNKGNFQKK-KFDDKENSWKDLVENPNKWWDNRFDKLNQRAPDFKH 177
           AP+WV S L+ L+FDN+ +  K  K +  + SWK+LVENP+KWWDNR  K  ++APDFKH
Sbjct: 39  APEWVSSKLEGLEFDNQTHKTKYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFKH 98

Query: 178 KETGEGLWLSGSPDWVMPKLPPVKS-KDVAGSKRETLLS 291
           K+TGE LWLS SP WV+ KLPP+K+ K+V  +KRETLLS
Sbjct: 99  KDTGEALWLSSSPAWVLSKLPPIKAGKNVTFTKRETLLS 137


>emb|CBI17867.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/99 (59%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   APKWVLSNLDALKFDNKGNFQKK-KFDDKENSWKDLVENPNKWWDNRFDKLNQRAPDFKH 177
           AP+WV S L+ L+FDN+ +  K  K +  + SWK+LVENP+KWWDNR  K  ++APDFKH
Sbjct: 113 APEWVSSKLEGLEFDNQTHKTKYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFKH 172

Query: 178 KETGEGLWLSGSPDWVMPKLPPVKS-KDVAGSKRETLLS 291
           K+TGE LWLS SP WV+ KLPP+K+ K+V  +KRETLLS
Sbjct: 173 KDTGEALWLSSSPAWVLSKLPPIKAGKNVTFTKRETLLS 211



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
 Frame = +1

Query: 46  NKGNFQKKKFDDKENS-WKDLVENPNKWWDNRFDKLN----QRAPDFKHKETGEGLWLSG 210
           + GN   KK  D   S W+DL+ NP +W DNR DKLN     + PDFK K+ G  LWL  
Sbjct: 53  HSGNSSLKKGGDSGLSLWRDLIMNPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDS 112

Query: 211 SPDWVMPKL 237
           +P+WV  KL
Sbjct: 113 APEWVSSKL 121


>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
           lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
           ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   APKWVLSNLDALKFD---NKGNFQKKKFDDKENSWKDLVENPNKWWDNRFDKLNQRAPDF 171
           AP WVL  L+ LKFD    KG   K+     E SWKDLV+NP+KWWDNR DK N +APDF
Sbjct: 275 APNWVLPKLEGLKFDVLVPKGRVVKQL--KGEESWKDLVQNPDKWWDNRIDKRNAKAPDF 332

Query: 172 KHKETGEGLWLSGSPDWVMPKLPPVKSK 255
           KHKETGE LWL+ SP WV+PKLPPVK K
Sbjct: 333 KHKETGEALWLNESPTWVLPKLPPVKKK 360



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +1

Query: 76  DDKENSWKDLVENPNKWWDNRFDKLN----QRAPDFKHKETGEGLWLSGSPDWVMPKLPP 243
           D+  +SW  L+ENP +WWD+R +K+N     R PDFK K++   LWL+ +P+WV+PKL  
Sbjct: 226 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKAPNWVLPKLEG 285

Query: 244 VK 249
           +K
Sbjct: 286 LK 287


>ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|222872520|gb|EEF09651.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   APKWVLSNLDALKFDNKGNFQKKKFDDKENS-WKDLVENPNKWWDNRFDKLNQRAPDFKH 177
           AP W+ S L+ +KFD K     +    KE   WKDLVENP+KWWDNR DK N ++PDFKH
Sbjct: 251 APSWIFSGLEKVKFDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKH 310

Query: 178 KETGEGLWLSGSPDWVMPKLPPVK-SKDVAGSK 273
           KETGEGLWL  SP WV+PKLPP K +++VAG++
Sbjct: 311 KETGEGLWLDTSPAWVLPKLPPTKGAENVAGTE 343



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 18/85 (21%)
 Frame = +1

Query: 49  KGNFQKKKF-----------DDKE---NSWKDLVENPNKWWDNRFDK----LNQRAPDFK 174
           +G+FQ KK            DD E   NSW DL+ENPN+WWD R  K    +  + PDFK
Sbjct: 179 EGSFQVKKSILEQQLEVPLDDDGESGSNSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFK 238

Query: 175 HKETGEGLWLSGSPDWVMPKLPPVK 249
           HK   + +WL+G+P W+   L  VK
Sbjct: 239 HKNNNQSVWLTGAPSWIFSGLEKVK 263


>ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1|
           protein OSB2 [Arabidopsis thaliana]
          Length = 371

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/88 (62%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   APKWVLSNLDALKFD---NKGNFQKKKFDDKENSWKDLVENPNKWWDNRFDKLNQRAPDF 171
           AP WVL  L+ L+FD    K    K+     E SWKDLV+NP+KWWDNR DK N +APDF
Sbjct: 280 APNWVLPKLEGLEFDVLVPKARVVKQL--KGEESWKDLVQNPDKWWDNRIDKRNAKAPDF 337

Query: 172 KHKETGEGLWLSGSPDWVMPKLPPVKSK 255
           KHKETGE LWL+ SP WV+PKLPPVK K
Sbjct: 338 KHKETGEALWLNESPTWVLPKLPPVKKK 365



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = +1

Query: 76  DDKENSWKDLVENPNKWWDNRFDKLN----QRAPDFKHKETGEGLWLSGSPDWVMPKL 237
           D+  +SW  L+ENP +WWD+R +K+N     R PDFK K++   LWL+ +P+WV+PKL
Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKL 288