BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014578
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-...   322   7e-86
emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]   321   2e-85
ref|XP_004139770.1| PREDICTED: sufE-like protein, chloroplastic-...   314   3e-83
ref|XP_002299058.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
ref|XP_002330596.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82

>ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-like [Vitis vinifera]
          Length = 378

 Score =  322 bits (826), Expect = 7e-86
 Identities = 185/305 (60%), Positives = 215/305 (70%), Gaps = 34/305 (11%)
 Frame = -2

Query: 997 DLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLKPLDPKFKTKENKVQGCVSQVWVRAYL 818
           DLPPKLQEIV LFQ+V++ KAKYQQL+FYG+NL PLD ++KT ENKVQGCVSQVWVRAYL
Sbjct: 75  DLPPKLQEIVKLFQAVEEPKAKYQQLLFYGKNLTPLDAQYKTTENKVQGCVSQVWVRAYL 134

Query: 817 DADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKITTVSKDFIMSLGLQQSLTASRNNG 638
           D+D+NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++ LGLQQSLT SRNNG
Sbjct: 135 DSDKNVVFEADSDSVLTKGLAALLVQGLSGRPVEEVVRVSPDFVVLLGLQQSLTPSRNNG 194

Query: 637 FVNMLGLMKRKAQQL-------SESGGAM-----VGNEAERAVNS--------------- 539
           F+NML LM++KA +L       SE  G       V    E  +NS               
Sbjct: 195 FLNMLKLMQKKALELYIEAKRSSELTGVEDPKVGVAGTGETGLNSNVEKPVRTSNLSSKI 254

Query: 538 GGTSEIVDDLTTETSETRESKFIG-------LGSRGERIKDLLVREFSPIELEVEDISHQ 380
           GG  + V  L++E S  R+S   G       LGSRG RIK++L R  SPIEL VEDIS+Q
Sbjct: 255 GGIEDSVVRLSSEVS-GRDSNLGGGATSETALGSRGGRIKEILERALSPIELLVEDISYQ 313

Query: 379 XXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQTGLHALSIVAKTPS 200
                       ETHFN+K+VS+ FEGKSLVKRHR+VYDLLQ ELQ GLHALSIVAKTPS
Sbjct: 314 HAGHAGVRGSDGETHFNLKVVSEEFEGKSLVKRHRVVYDLLQEELQNGLHALSIVAKTPS 373

Query: 199 EVSGR 185
           EVSGR
Sbjct: 374 EVSGR 378


>emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]
          Length = 378

 Score =  321 bits (823), Expect = 2e-85
 Identities = 183/305 (60%), Positives = 216/305 (70%), Gaps = 34/305 (11%)
 Frame = -2

Query: 997 DLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLKPLDPKFKTKENKVQGCVSQVWVRAYL 818
           DLPPKLQEIV LFQ+V++ KAKYQQL+FYG+NL PLD ++KT ENKVQGCVSQVWVRAYL
Sbjct: 75  DLPPKLQEIVKLFQAVEEPKAKYQQLLFYGKNLTPLDAQYKTTENKVQGCVSQVWVRAYL 134

Query: 817 DADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKITTVSKDFIMSLGLQQSLTASRNNG 638
           D+D++V FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++ LGLQQSLT SRNNG
Sbjct: 135 DSDKSVVFEADSDSVLTKGLAALLVQGLSGRPVEEVVRVSPDFVVLLGLQQSLTPSRNNG 194

Query: 637 FVNMLGLMKRKAQQL---SESGGAMVGNE---------AERAVNS--------------- 539
           F+NML LM++KA +L   +E    + G E          E  +NS               
Sbjct: 195 FLNMLKLMQKKALELYIEAERSSELTGVEDPKVGVAGTGETGLNSNVEKPVRXLNLSSKI 254

Query: 538 GGTSEIVDDLTTETSETRESKFIG-------LGSRGERIKDLLVREFSPIELEVEDISHQ 380
           GG  + V  L++E S  R+S   G       LGSRG RIK++L R  SPIEL VEDIS+Q
Sbjct: 255 GGIEDSVVRLSSEVS-GRDSNLGGGATSETALGSRGGRIKEILERALSPIELLVEDISYQ 313

Query: 379 XXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQTGLHALSIVAKTPS 200
                       ETHFN+K+VS+ FEGKSLVKRHR+VYDLLQ ELQ GLHALSIVAKTPS
Sbjct: 314 HAGHAGVRGSDGETHFNLKVVSEEFEGKSLVKRHRVVYDLLQEELQNGLHALSIVAKTPS 373

Query: 199 EVSGR 185
           EVSGR
Sbjct: 374 EVSGR 378


>ref|XP_004139770.1| PREDICTED: sufE-like protein, chloroplastic-like [Cucumis sativus]
           gi|449482614|ref|XP_004156349.1| PREDICTED: sufE-like
           protein, chloroplastic-like [Cucumis sativus]
          Length = 342

 Score =  314 bits (804), Expect = 3e-83
 Identities = 169/276 (61%), Positives = 204/276 (73%), Gaps = 9/276 (3%)
 Frame = -2

Query: 994 LPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLKPLDPKFKTKENKVQGCVSQVWVRAYLD 815
           LPPKLQ+IV LFQSV D++AKY+QLMFYG+NLKPL P+FK   NKV+GCVSQVWVRAYLD
Sbjct: 69  LPPKLQDIVKLFQSVQDSRAKYEQLMFYGKNLKPLHPQFKNNSNKVEGCVSQVWVRAYLD 128

Query: 814 ADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKITTVSKDFIMSLGLQQSLTASRNNGF 635
           +D+NV +EADSDS LTKGLAALLVQGLS +PV +I  VS DF++ LGLQQSLT SRNNGF
Sbjct: 129 SDKNVVYEADSDSVLTKGLAALLVQGLSNRPVDEILRVSPDFVVLLGLQQSLTPSRNNGF 188

Query: 634 VNMLGLMKRKAQQL---SESG------GAMVGNEAERAVNSGGTSEIVDDLTTETSETRE 482
           +NML LM++KA  L   SE G       +   + AE+      T + V D       ++ 
Sbjct: 189 LNMLKLMQKKALALLVESEKGNGSAVSSSQTDDSAEKVKPESNTEKSVVDSKLGDKGSQS 248

Query: 481 SKFIGLGSRGERIKDLLVREFSPIELEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFE 302
           S    LGSRG+RIK++L RE +P+EL VEDIS+Q            ETHFN+K+VSK FE
Sbjct: 249 SDV--LGSRGKRIKEILERELNPVELYVEDISYQHAGHAGVRGNDGETHFNLKVVSKEFE 306

Query: 301 GKSLVKRHRLVYDLLQNELQTGLHALSIVAKTPSEV 194
           GKSLVKRHRLVY+LLQ+ELQ+GLHALSI AKTP E+
Sbjct: 307 GKSLVKRHRLVYNLLQDELQSGLHALSISAKTPDEI 342


>ref|XP_002299058.1| predicted protein [Populus trichocarpa] gi|222846316|gb|EEE83863.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  314 bits (804), Expect = 3e-83
 Identities = 174/303 (57%), Positives = 212/303 (69%), Gaps = 33/303 (10%)
 Frame = -2

Query: 997 DLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLKPLDPKFKTKENKVQGCVSQVWVRAYL 818
           +LPPKLQEI+ LFQSV + KAKY+QL+FYG+NLKPLD +FKT+ENKV+GCVSQVWVRAYL
Sbjct: 8   ELPPKLQEIIKLFQSVQEPKAKYEQLLFYGKNLKPLDSEFKTRENKVEGCVSQVWVRAYL 67

Query: 817 DADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKITTVSKDFIMSLGLQQSLTASRNNG 638
           D ++NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++SLGLQQSLT SRNNG
Sbjct: 68  DFEKNVVFEADSDSVLTKGLAALLVQGLSGRPVEEVLRVSPDFVVSLGLQQSLTPSRNNG 127

Query: 637 FVNMLGLMKRKAQQL---SESGGAMV-------------------GNEAERAVNSGGTSE 524
           F+NML LM++K  +L   +E G   V                   G+  +  V S G + 
Sbjct: 128 FLNMLKLMQKKTLELYMEAEKGSGAVESSKLRDGSGENEGKIENLGSNGDVGVESSGDNS 187

Query: 523 IV-----------DDLTTETSETRESKFIGLGSRGERIKDLLVREFSPIELEVEDISHQX 377
           +            + L  E SE + S    LGSRG R+++ L RE SP+ELEVEDIS+Q 
Sbjct: 188 VKGLSFDAKIDGGEGLGPEGSE-KGSNSKALGSRGIRVREKLERELSPVELEVEDISYQH 246

Query: 376 XXXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQTGLHALSIVAKTPSE 197
                      ETHFNVK+VSK F+GKSLVKRHRL+Y+LLQ+ELQ+GLHALSIVAKT  E
Sbjct: 247 AGHAGVRGSNGETHFNVKVVSKEFDGKSLVKRHRLIYNLLQDELQSGLHALSIVAKTLDE 306

Query: 196 VSG 188
           V G
Sbjct: 307 VDG 309


>ref|XP_002330596.1| predicted protein [Populus trichocarpa] gi|222872154|gb|EEF09285.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  311 bits (796), Expect = 2e-82
 Identities = 171/303 (56%), Positives = 209/303 (68%), Gaps = 32/303 (10%)
 Frame = -2

Query: 997 DLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLKPLDPKFKTKENKVQGCVSQVWVRAYL 818
           +LPPKLQE++ LFQSV + KAKY+QL+FYG+NLKPLD +FKT+ENKV+GCVSQVWVRAYL
Sbjct: 69  ELPPKLQEMIKLFQSVQEPKAKYEQLLFYGKNLKPLDSEFKTRENKVEGCVSQVWVRAYL 128

Query: 817 DADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKITTVSKDFIMSLGLQQSLTASRNNG 638
           D ++NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF + LGLQQSLT SRNNG
Sbjct: 129 DLEKNVVFEADSDSVLTKGLAALLVQGLSGRPVKEVLRVSPDFAVLLGLQQSLTPSRNNG 188

Query: 637 FVNMLGLMKRKAQQL---SESGGAMVGNEAERAVNSGGTSEIVD-----DLTTETS---- 494
           F+NML LM++KA +L   +E G  +V +      N     ++ D     D+  ETS    
Sbjct: 189 FLNMLKLMQKKALELYLEAEKGSGVVESSKLGGGNGDNEGKVEDLGSNGDVGVETSGDNF 248

Query: 493 --------------------ETRESKFIGLGSRGERIKDLLVREFSPIELEVEDISHQXX 374
                                 + S   GLGSRG RI++ L +E SP+ELEV+DIS+Q  
Sbjct: 249 VKGLSFDGKTDGGETSGLEGSEKGSNSEGLGSRGLRIREKLEKELSPVELEVDDISYQHA 308

Query: 373 XXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQTGLHALSIVAKTPSEV 194
                     ETHFNVK+VSK F GKSLVKRHRL+Y+LLQ EL++GLHALSIVAKTP EV
Sbjct: 309 GHAGVRGSDGETHFNVKVVSKEFGGKSLVKRHRLIYNLLQEELESGLHALSIVAKTPDEV 368

Query: 193 SGR 185
             R
Sbjct: 369 GER 371