BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014576
         (1618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]        459   e-166
gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x...   459   e-166
gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]      451   e-166
gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]          455   e-165
ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1...   448   e-165

>gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]
          Length = 349

 Score =  459 bits (1182), Expect(2) = e-166
 Identities = 222/257 (86%), Positives = 237/257 (92%)
 Frame = -3

Query: 1415 AASNGPVSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSV 1236
            A  NG  +DLR+ FL VYSVLKSELL D +FE+TD SR+WVERMLDYNVPGGKLNRGLSV
Sbjct: 2    ANHNGQTTDLREAFLGVYSVLKSELLNDPAFEWTDASREWVERMLDYNVPGGKLNRGLSV 61

Query: 1235 IDSYKLLNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKV 1056
            IDSYKLL EGK LTE EVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRV KV
Sbjct: 62   IDSYKLLKEGKDLTEEEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKV 121

Query: 1055 GMIAVNDGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKD 876
            GMIAVNDGIILRNHIPRILK HFR K YY++L++LFNEVEFQTASGQMIDLITT++GEKD
Sbjct: 122  GMIAVNDGIILRNHIPRILKKHFRNKPYYVDLVDLFNEVEFQTASGQMIDLITTIEGEKD 181

Query: 875  LSKYTLPVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDY 696
            LSKY+LP+HRRIVQYKTAYYSFYLPVACALLMAGENLDNH  VKDVLI+MG YFQVQDDY
Sbjct: 182  LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVNVKDVLIDMGIYFQVQDDY 241

Query: 695  LDCFGDPEVIGKIGTDI 645
            LDCFG+PE IGKIGTDI
Sbjct: 242  LDCFGEPEKIGKIGTDI 258



 Score =  155 bits (392), Expect(2) = e-166
 Identities = 74/97 (76%), Positives = 85/97 (87%)
 Frame = -1

Query: 571 KIGTDIEDFKCSWLVVQALERANIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAE 392
           KIGTDIEDFKCSWLVVQALE  N +Q K+L+E+YGK DP  VAK+K LY ++NLQ +F +
Sbjct: 253 KIGTDIEDFKCSWLVVQALEHCNEEQKKILFEHYGKPDPADVAKIKALYNEINLQSIFTD 312

Query: 391 YEAKSYEKLISSIEAHPSKAVQAVLKSFLGKIYKRQK 281
           YE+KSYEKL SSIE+HPSKAVQAVLKSFLGKIYKRQK
Sbjct: 313 YESKSYEKLNSSIESHPSKAVQAVLKSFLGKIYKRQK 349


>gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita]
          Length = 349

 Score =  459 bits (1181), Expect(2) = e-166
 Identities = 219/254 (86%), Positives = 237/254 (93%)
 Frame = -3

Query: 1406 NGPVSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDS 1227
            NG  SDLRKTFL VYS LKSELL D +FE+TD SRQWVERMLDYNVPGGKLNRGLSVIDS
Sbjct: 5    NGAASDLRKTFLGVYSTLKSELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDS 64

Query: 1226 YKLLNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMI 1047
            Y+LL EGK LT++EVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWF+V KVGMI
Sbjct: 65   YQLLKEGKDLTDDEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFKVPKVGMI 124

Query: 1046 AVNDGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSK 867
            A+NDGIILRNHIPRILK HFR K YY++L++LFNEVEFQTASGQMIDLITT++GEKDLSK
Sbjct: 125  AINDGIILRNHIPRILKKHFRSKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSK 184

Query: 866  YTLPVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDC 687
            Y+LP+HRRIVQYKTAYYSFYLPVACALLMAGENL+NH  VKDVLI+MG YFQVQDDYLDC
Sbjct: 185  YSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDC 244

Query: 686  FGDPEVIGKIGTDI 645
            FG+PE IGKIGTDI
Sbjct: 245  FGEPEKIGKIGTDI 258



 Score =  153 bits (386), Expect(2) = e-166
 Identities = 73/97 (75%), Positives = 86/97 (88%)
 Frame = -1

Query: 571 KIGTDIEDFKCSWLVVQALERANIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAE 392
           KIGTDIEDFKCSWLVV+ALE  N +Q K L+E+YGK +P  VAK+K LY D+NLQG+FA+
Sbjct: 253 KIGTDIEDFKCSWLVVKALELCNEEQKKTLFEHYGKENPADVAKIKALYNDINLQGMFAD 312

Query: 391 YEAKSYEKLISSIEAHPSKAVQAVLKSFLGKIYKRQK 281
           +E+KSYEK+ SSIEAHPSK+VQAVLKSFLGKIYKRQK
Sbjct: 313 FESKSYEKITSSIEAHPSKSVQAVLKSFLGKIYKRQK 349


>gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score =  451 bits (1159), Expect(2) = e-166
 Identities = 213/251 (84%), Positives = 235/251 (93%)
 Frame = -3

Query: 1397 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1218
            +SDL+  FLEVYSVLKS+LL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1    MSDLKTRFLEVYSVLKSDLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 1217 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1038
            L EGK L+++E+ L+SALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+ KVGMIA+N
Sbjct: 61   LKEGKELSDDEIVLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRIPKVGMIAIN 120

Query: 1037 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 858
            DGI+LRNHIPRILK HFR+K YY++L++LFNEVEFQTA GQMIDLITTL GEKDLSKY+L
Sbjct: 121  DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSL 180

Query: 857  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 678
            P+HRRIVQYKTAYYSFYLPVACALLMAGE+L+ HT VKD+LIEMGTYFQVQDDYLDCFG 
Sbjct: 181  PIHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA 240

Query: 677  PEVIGKIGTDI 645
            PEVIGKIGTDI
Sbjct: 241  PEVIGKIGTDI 251



 Score =  161 bits (408), Expect(2) = e-166
 Identities = 78/97 (80%), Positives = 87/97 (89%)
 Frame = -1

Query: 571 KIGTDIEDFKCSWLVVQALERANIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAE 392
           KIGTDIEDFKCSWLVV+ALE +N +Q K L+ENYGK DP CVAK+KELYKDL LQ VFAE
Sbjct: 246 KIGTDIEDFKCSWLVVKALELSNEEQKKCLHENYGKEDPACVAKIKELYKDLKLQDVFAE 305

Query: 391 YEAKSYEKLISSIEAHPSKAVQAVLKSFLGKIYKRQK 281
           YE+KSYEKLI  IEAHP+++VQAVLKSFLGKIYKRQK
Sbjct: 306 YESKSYEKLIKFIEAHPNQSVQAVLKSFLGKIYKRQK 342


>gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
          Length = 342

 Score =  455 bits (1171), Expect(2) = e-165
 Identities = 216/251 (86%), Positives = 238/251 (94%)
 Frame = -3

Query: 1397 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1218
            +SDL+  FLEVYSVLKSELL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1    MSDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 1217 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1038
            L EGK L+++E+FL+SALGWCIEWLQAYFLVLDDIMD+SHTRRGQPCWFR+ KVGMIAVN
Sbjct: 61   LKEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN 120

Query: 1037 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 858
            DGI+LRNHIPRILK HFR+K YY++L++LFNEVEFQTASGQMIDLITTL GEKDLSKY+L
Sbjct: 121  DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSL 180

Query: 857  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 678
            P+HRRIVQYKTAYYSFYLPVACALLM+GE+L+ HT VKD+LIEMGTYFQVQDDYLDCFG 
Sbjct: 181  PIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA 240

Query: 677  PEVIGKIGTDI 645
            PEVIGKIGTDI
Sbjct: 241  PEVIGKIGTDI 251



 Score =  154 bits (390), Expect(2) = e-165
 Identities = 77/97 (79%), Positives = 84/97 (86%)
 Frame = -1

Query: 571 KIGTDIEDFKCSWLVVQALERANIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAE 392
           KIGTDIEDFKCSWLVV+ALE +N +Q K L+ENYGK DP  VAKVKELY  L LQ VFAE
Sbjct: 246 KIGTDIEDFKCSWLVVKALELSNEEQKKFLHENYGKDDPASVAKVKELYNTLKLQDVFAE 305

Query: 391 YEAKSYEKLISSIEAHPSKAVQAVLKSFLGKIYKRQK 281
           YE+KSY+KLI  IEAHPS+AVQAVLKSFLGKIYKRQK
Sbjct: 306 YESKSYDKLIKFIEAHPSQAVQAVLKSFLGKIYKRQK 342


>ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1 [Vitis vinifera]
            gi|296089967|emb|CBI39786.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  448 bits (1153), Expect(2) = e-165
 Identities = 212/251 (84%), Positives = 235/251 (93%)
 Frame = -3

Query: 1397 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1218
            +S+ +  FLEVYSVLKSELL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSV+DSYKL
Sbjct: 1    MSETKSKFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKL 60

Query: 1217 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1038
            L +G+ LT++EVFLA  LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRV KVGMIA N
Sbjct: 61   L-QGRQLTDDEVFLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAN 119

Query: 1037 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 858
            DG+ILRN IPRILKNHF+ K YY++L++LFNEVEFQTASGQMIDLITT++GEKDLSKY+L
Sbjct: 120  DGVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 179

Query: 857  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 678
            P+HRRIVQYKTAYYSFYLPVACALLMAGENLDNHT VKD+L++MG YFQVQDDYLDCFGD
Sbjct: 180  PLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239

Query: 677  PEVIGKIGTDI 645
            P+VIGKIGTDI
Sbjct: 240  PQVIGKIGTDI 250



 Score =  161 bits (408), Expect(2) = e-165
 Identities = 81/97 (83%), Positives = 86/97 (88%)
 Frame = -1

Query: 571 KIGTDIEDFKCSWLVVQALERANIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAE 392
           KIGTDIEDFKCSWLVV+ALE  N +Q K LY NYGKADP  VAKVK LYKDL+LQGVF E
Sbjct: 245 KIGTDIEDFKCSWLVVKALEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLE 304

Query: 391 YEAKSYEKLISSIEAHPSKAVQAVLKSFLGKIYKRQK 281
           YE+KSYE L+SSIEAHPSKAVQAVLKSFLGKIYKRQK
Sbjct: 305 YESKSYETLVSSIEAHPSKAVQAVLKSFLGKIYKRQK 341