BLASTX nr result

ID: Coptis24_contig00014567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014567
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526676.1| conserved hypothetical protein [Ricinus comm...   111   9e-41
ref|XP_002323026.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-40
ref|XP_004168086.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   110   3e-40
ref|XP_004151010.1| PREDICTED: uncharacterized protein LOC101214...   110   3e-40
ref|XP_002264310.2| PREDICTED: uncharacterized protein LOC100246...   107   2e-39

>ref|XP_002526676.1| conserved hypothetical protein [Ricinus communis]
           gi|223533976|gb|EEF35698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 467

 Score =  111 bits (278), Expect(2) = 9e-41
 Identities = 45/64 (70%), Positives = 54/64 (84%)
 Frame = -1

Query: 362 EKCDMFTVKWIFDNASYPVHNESDCPYISVQLACWKHGRTDLEYWNWRWEPHE*NLKRWN 183
           E+CD+F+ KW+FDN SYP++NESDCPY+S QLAC KHGR+DL Y  WRW+PH  NLKRWN
Sbjct: 127 ERCDVFSGKWVFDNKSYPLYNESDCPYMSDQLACHKHGRSDLGYQYWRWQPHNCNLKRWN 186

Query: 182 ATEM 171
            TEM
Sbjct: 187 VTEM 190



 Score = 80.9 bits (198), Expect(2) = 9e-41
 Identities = 41/50 (82%), Positives = 42/50 (84%)
 Frame = -2

Query: 166 EKLIGKSLMFVGNSLNRGQWISMVCLLQLVIPTD*ISMSPNYPLTIFREE 17
           EKL GK LMFVG+SLNRGQWISMVCLLQ VIP D  SMSPN PLTIFR E
Sbjct: 192 EKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPADKRSMSPNAPLTIFRAE 241


>ref|XP_002323026.1| predicted protein [Populus trichocarpa] gi|222867656|gb|EEF04787.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -1

Query: 362 EKCDMFTVKWIFDNASYPVHNESDCPYISVQLACWKHGRTDLEYWNWRWEPHE*NLKRWN 183
           E CD+F  KW+FD  SYP++NESDCPY+S QLAC KHGR+DL Y +WRW+PH+ NLKRWN
Sbjct: 107 ESCDVFAGKWVFDRESYPLYNESDCPYMSDQLACHKHGRSDLGYQHWRWQPHDCNLKRWN 166

Query: 182 ATEM 171
            TEM
Sbjct: 167 VTEM 170



 Score = 80.9 bits (198), Expect(2) = 3e-40
 Identities = 41/50 (82%), Positives = 42/50 (84%)
 Frame = -2

Query: 166 EKLIGKSLMFVGNSLNRGQWISMVCLLQLVIPTD*ISMSPNYPLTIFREE 17
           EKL GK LMFVG+SLNRGQWISMVCLLQ VIP D  SMSPN PLTIFR E
Sbjct: 172 EKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPADKRSMSPNAPLTIFRAE 221


>ref|XP_004168086.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101214109
           [Cucumis sativus]
          Length = 445

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -1

Query: 362 EKCDMFTVKWIFDNASYPVHNESDCPYISVQLACWKHGRTDLEYWNWRWEPHE*NLKRWN 183
           E+CD+F+ KW+FDN SYP++NES CPY+S QLAC KHGRTDL Y  WRW+PH+ NLKRWN
Sbjct: 105 ERCDVFSGKWVFDNTSYPLYNESKCPYMSDQLACHKHGRTDLRYQYWRWQPHDCNLKRWN 164

Query: 182 ATEM 171
             EM
Sbjct: 165 IAEM 168



 Score = 80.9 bits (198), Expect(2) = 3e-40
 Identities = 41/50 (82%), Positives = 42/50 (84%)
 Frame = -2

Query: 166 EKLIGKSLMFVGNSLNRGQWISMVCLLQLVIPTD*ISMSPNYPLTIFREE 17
           EKL GK LMFVG+SLNRGQWISMVCLLQ VIP D  SMSPN PLTIFR E
Sbjct: 170 EKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPADKKSMSPNAPLTIFRAE 219


>ref|XP_004151010.1| PREDICTED: uncharacterized protein LOC101214109 [Cucumis sativus]
          Length = 445

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -1

Query: 362 EKCDMFTVKWIFDNASYPVHNESDCPYISVQLACWKHGRTDLEYWNWRWEPHE*NLKRWN 183
           E+CD+F+ KW+FDN SYP++NES CPY+S QLAC KHGRTDL Y  WRW+PH+ NLKRWN
Sbjct: 105 ERCDVFSGKWVFDNTSYPLYNESKCPYMSDQLACHKHGRTDLRYQYWRWQPHDCNLKRWN 164

Query: 182 ATEM 171
             EM
Sbjct: 165 IAEM 168



 Score = 80.9 bits (198), Expect(2) = 3e-40
 Identities = 41/50 (82%), Positives = 42/50 (84%)
 Frame = -2

Query: 166 EKLIGKSLMFVGNSLNRGQWISMVCLLQLVIPTD*ISMSPNYPLTIFREE 17
           EKL GK LMFVG+SLNRGQWISMVCLLQ VIP D  SMSPN PLTIFR E
Sbjct: 170 EKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPADKKSMSPNAPLTIFRAE 219


>ref|XP_002264310.2| PREDICTED: uncharacterized protein LOC100246524 [Vitis vinifera]
          Length = 445

 Score =  107 bits (267), Expect(2) = 2e-39
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = -1

Query: 374 KGVEEKCDMFTVKWIFDNASYPVHNESDCPYISVQLACWKHGRTDLEYWNWRWEPHE*NL 195
           +G  E+CD+F+ KW FDN SYP++NES CPY+S QLAC KHGR+DL Y  WRW+PH  NL
Sbjct: 102 RGPSERCDVFSGKWAFDNTSYPLYNESHCPYMSDQLACHKHGRSDLGYQYWRWQPHYCNL 161

Query: 194 KRWNATEM 171
           KRWN  EM
Sbjct: 162 KRWNVNEM 169



 Score = 80.9 bits (198), Expect(2) = 2e-39
 Identities = 41/50 (82%), Positives = 42/50 (84%)
 Frame = -2

Query: 166 EKLIGKSLMFVGNSLNRGQWISMVCLLQLVIPTD*ISMSPNYPLTIFREE 17
           EKL GK LMFVG+SLNRGQWISMVCLLQ VIP D  SMSPN PLTIFR E
Sbjct: 171 EKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPADKRSMSPNAPLTIFRAE 220


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