BLASTX nr result
ID: Coptis24_contig00014562
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014562 (1048 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525113.1| splicing factor u2af large subunit, putative... 139 2e-30 gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora] 138 2e-30 gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata] 138 2e-30 sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large... 138 2e-30 sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 138 3e-30 >ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis] gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis] Length = 549 Score = 139 bits (349), Expect = 2e-30 Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 1048 QVTRHAHRVYVGGLPAGADEQKIVSFFGHVLVDIGAHT-GPALAVVNIHINREKNFAILE 872 Q TRHA RVYVGGLP A+EQ + +FF HV+ IG +T GP AVVN++IN EK FA +E Sbjct: 250 QATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 309 Query: 871 MSSVALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSA 692 M SV ASN MAL+GIIFEG +++RR SDYNP LAA LGP+QP+ L L A+ P SA Sbjct: 310 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSA 369 >gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora] Length = 570 Score = 138 bits (348), Expect = 2e-30 Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 1048 QVTRHAHRVYVGGLPAGADEQKIVSFFGHVLVDIGAHT-GPALAVVNIHINREKNFAILE 872 Q TRHA RVYVGGLP A+EQ + +FF HV+ IG +T GP AVVN++IN EK FA +E Sbjct: 231 QATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVE 290 Query: 871 MSSVALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSA 692 M SV ASN MAL+GIIFEG +++RR SDYNP LAA LGP+QP+ L L A+ P SA Sbjct: 291 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 350 Score = 66.2 bits (160), Expect = 1e-08 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 7/251 (2%) Frame = -1 Query: 1027 RVYVGGLPAGADEQKIVSFFGHVLVDIGAHTGPALAVVNIHINREKNFAI-----LEMSS 863 R++VGGLP E +I +L G G L V + K +A L ++ Sbjct: 358 RIFVGGLPYYFTEGQI----RELLESFGPLRGFDL-VKDRETGNSKGYAFCVYQDLSVTD 412 Query: 862 VALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSATND 683 +A A ALNGI +L +RR AN G TQP + Sbjct: 413 IACA----ALNGIKMGDKTLTVRR---------ANQGVTQPK----------------PE 443 Query: 682 QDSMFRRKMLALAWEASIPHSNGLDARRSHVVCLLEAVCASNPLCDDEYK-CLEGFFWKT 506 Q+S+ +A + + L + V+CL + V A D++Y LE + Sbjct: 444 QESVLLHAQQQIALQKLMLQPGTLATK---VLCLTQVVSADELRDDEDYADILEDMRLEC 500 Query: 505 GEIYGKLKSVYVPRPDGKQKGLP-IGRVFLEYELMKSAVEAMEGINGKVLGRERVLAFYY 329 G+ L ++ +PRP P +G+VFLEY ++SA +A +G++G+ G +V+A +Y Sbjct: 501 GKF--TLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFGGNQVVAVFY 558 Query: 328 PEDKYASKEWD 296 PE++++ ++D Sbjct: 559 PENRFSQGDYD 569 >gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata] Length = 557 Score = 138 bits (348), Expect = 2e-30 Identities = 71/120 (59%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 1048 QVTRHAHRVYVGGLPAGADEQKIVSFFGHVLVDIGAHT-GPALAVVNIHINREKNFAILE 872 Q TRHA RVYVGGLP A+EQ + +FF HV+ IG +T GP AVVN++IN EK FA +E Sbjct: 220 QATRHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVE 279 Query: 871 MSSVALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSA 692 M SV ASN MAL+G+IFEG +++RR SDYNP LAA LGP+QPS L L A+ P S+ Sbjct: 280 MRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 339 Score = 60.8 bits (146), Expect = 5e-07 Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 3/247 (1%) Frame = -1 Query: 1027 RVYVGGLPAGADEQKIVSFFGHVLVDIGAHTGPALAVVNIHINREKNFAILEMSSVALAS 848 R++VGGLP E +I +L G G L V + K +A V++ Sbjct: 347 RIFVGGLPYYFTESQI----RELLESFGQLRGFDL-VKDRETGNSKGYAFCVYQDVSVTD 401 Query: 847 NTMA-LNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSATNDQDSM 671 A LNGI +L +RR AN G QP+ +Q+S+ Sbjct: 402 IACAALNGIKMGDKTLTVRR---------ANQGTPQPN----------------PEQESV 436 Query: 670 FRRKMLALAWEASIPHSNGLDARRSHVVCLLEAVCASNPLCDDEYK-CLEGFFWKTGEIY 494 +A + + L + V+CL +AV DD+Y+ LE + G+ + Sbjct: 437 LLHAQQQIALQKFMFQPGALATK---VLCLTQAVSVDELNDDDDYQDILEDMRTECGK-F 492 Query: 493 GKLKSVYVPRPDGKQKGLP-IGRVFLEYELMKSAVEAMEGINGKVLGRERVLAFYYPEDK 317 G L +V +PRP+ + P IG+ Y + + +A +G+NG+ G +V+A +YPE+K Sbjct: 493 GALLNVVIPRPNPNGEPTPGIGK----YADVDGSSKARQGLNGRKFGGNQVVAVFYPENK 548 Query: 316 YASKEWD 296 ++ +++ Sbjct: 549 FSEGDYE 555 >sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subunit B gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] Length = 573 Score = 138 bits (348), Expect = 2e-30 Identities = 73/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 1048 QVTRHAHRVYVGGLPAGADEQKIVSFFGHVLVDIGAHT-GPALAVVNIHINREKNFAILE 872 Q TRHA RVYVGGLPA A+EQ + +FF HV+ IG +T GP AVVN++IN EK FA +E Sbjct: 233 QATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVE 292 Query: 871 MSSVALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSA 692 M SV ASN MAL+GIIFEG ++RR SDYNP LAA LGP+QP+ L L A+ P SA Sbjct: 293 MRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSA 352 Score = 68.9 bits (167), Expect = 2e-09 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 3/247 (1%) Frame = -1 Query: 1027 RVYVGGLPAGADEQKIVSFFGHVLVDIGAHTGPALAVVNIHINREKNFAILEMSSVALAS 848 R++VGGLP E +I +L G G L V + K +A V++ Sbjct: 360 RIFVGGLPYYFTEAQI----RELLESFGPLRGFDL-VKDRETGNSKGYAFCVYQDVSVTD 414 Query: 847 NTMA-LNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSATNDQDSM 671 A LNGI +L +RR AN G TQP +Q+S+ Sbjct: 415 IACAALNGIKMGDKTLTVRR---------ANQGTTQPK----------------PEQESV 449 Query: 670 FRRKMLALAWEASIPHSNGLDARRSHVVCLLEAVCASNPLCDDEYK-CLEGFFWKTGEIY 494 +A + + L + V+ L E + A D++Y+ LE + G+ + Sbjct: 450 LLHAQQQIALQRLMLQPATLATK---VLSLTEVISADELNDDEDYQDILEDMRTECGK-F 505 Query: 493 GKLKSVYVPRPDGKQKGLP-IGRVFLEYELMKSAVEAMEGINGKVLGRERVLAFYYPEDK 317 G L +V +PRP + P +G+VFLEY + S+ +A + +NG+ G +V+A +YPE+K Sbjct: 506 GSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENK 565 Query: 316 YASKEWD 296 + ++D Sbjct: 566 FYEGDYD 572 >sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName: Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa subunit A; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit A; Short=U2 snRNP auxiliary factor large subunit A gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] Length = 555 Score = 138 bits (347), Expect = 3e-30 Identities = 71/120 (59%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 1048 QVTRHAHRVYVGGLPAGADEQKIVSFFGHVLVDIGAHT-GPALAVVNIHINREKNFAILE 872 Q TRHA RVYVGGLP A+EQ + +FF HV+ IG +T GP AVVN++IN EK FA +E Sbjct: 215 QATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVE 274 Query: 871 MSSVALASNTMALNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSA 692 M SV ASN MAL+G+IFEG +++RR SDYNP LAA LGP+QPS L L A+ P S+ Sbjct: 275 MRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSS 334 Score = 74.3 bits (181), Expect = 5e-11 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 2/246 (0%) Frame = -1 Query: 1027 RVYVGGLPAGADEQKIVSFFGHVLVDIGAHTGPALAVVNIHINREKNFAILEMSSVALAS 848 R++VGGLP E +I +L G G L V + K +A V++ Sbjct: 342 RIFVGGLPYYFTESQI----RELLESFGQLRGFDL-VKDRETGNSKGYAFCVYQDVSVTD 396 Query: 847 NTMA-LNGIIFEGTSLRIRRLSDYNPGLAANLGPTQPSCYLKLEAIDRLPLSATNDQDSM 671 A LNGI +L +RR AN G TQP+ +Q+S+ Sbjct: 397 IACAALNGIKMGDKTLTVRR---------ANQGTTQPN----------------PEQESV 431 Query: 670 FRRKMLALAWEASIPHSNGLDARRSHVVCLLEAVCASNPLCDDEYKCLEGFFWKTGEIYG 491 +A + + L + V+CL E V DD+Y+ + E +G Sbjct: 432 LLHAQQQIALQRFMLQPGALATK---VLCLTEVVTVDELNDDDDYQDILEDMRTECEKFG 488 Query: 490 KLKSVYVPRPDGKQKGLP-IGRVFLEYELMKSAVEAMEGINGKVLGRERVLAFYYPEDKY 314 L +V +PRP+ P +G+VFLEY + + +A +G+NG+ G +V+A +YPE+K+ Sbjct: 489 ALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKF 548 Query: 313 ASKEWD 296 + +++ Sbjct: 549 SEGDYE 554