BLASTX nr result

ID: Coptis24_contig00014560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014560
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556256.1| PREDICTED: protein IDA-LIKE 1-like [Glycine ...    68   9e-10
ref|XP_003535511.1| PREDICTED: protein IDA-like [Glycine max]          66   3e-09
ref|XP_003516864.1| PREDICTED: protein IDA-like [Glycine max]          56   3e-06
ref|XP_002314892.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003518833.1| PREDICTED: protein IDA-LIKE 1-like [Glycine ...    55   6e-06

>ref|XP_003556256.1| PREDICTED: protein IDA-LIKE 1-like [Glycine max]
          Length = 94

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -3

Query: 452 IFLVLFILPCCCTSTRSGGTVIIADGLSPQRQHKLEVGIRYQAWVFNYFPKGTPIPPSGP 273
           I L   +L   CT+TR+G T+ + +G    R  + +    Y+  VFN+FPKG PIPPSGP
Sbjct: 21  ILLAFLLLVGSCTATRTGATMRLNEGSELLRPKQQKPRFPYKGLVFNFFPKGVPIPPSGP 80

Query: 272 SRGHNSVVDSVLHN 231
           S+ HNS+V S   N
Sbjct: 81  SKRHNSLVASTPQN 94


>ref|XP_003535511.1| PREDICTED: protein IDA-like [Glycine max]
          Length = 94

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -3

Query: 452 IFLVLFILPCCCTSTRSGGTVIIADGLSPQRQHKLEVGIRYQAWVFNYFPKGTPIPPSGP 273
           I LV  +L   CT+ R+G T+ + +G    R+ + +    Y+  VFN+ PKG PIPPSGP
Sbjct: 21  ILLVYLLLVGSCTAIRTGATMRLNEGSELLRRKQQQPRFPYKGLVFNFLPKGVPIPPSGP 80

Query: 272 SRGHNSVVDSVLHN 231
           S+ HNSVV S   N
Sbjct: 81  SKRHNSVVASTPKN 94


>ref|XP_003516864.1| PREDICTED: protein IDA-like [Glycine max]
          Length = 94

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 455 LIFLVLFILPCCCTSTRSGGTVIIADGLSP-QRQHKLEVGIRYQAWVFNYFPKGTPIPPS 279
           L+F+ L ++  C  + R G T+ + +     +R+   + G  Y++ VFN+FPKG P+PPS
Sbjct: 21  LLFVYLLLIGSC-DAIRIGQTMKLNETREILKRKRNNQHGFPYKSMVFNFFPKG-PVPPS 78

Query: 278 GPSRGHNSVVDSVLHN 231
           GPS+ HN+VVDS  +N
Sbjct: 79  GPSKRHNAVVDSTPNN 94


>ref|XP_002314892.1| predicted protein [Populus trichocarpa] gi|222863932|gb|EEF01063.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = -3

Query: 452 IFLVLFILPCCCTSTRSGGTVI-------IADGLSPQRQ-HKLEVGIRYQAWVFNYFPKG 297
           +  ++F+L   C++TR G T++        ++ + P R+ +K   G R    VFN+ PKG
Sbjct: 21  LLFIIFLLVTSCSATRPGATLMGDKDTLKESENVKPYRRLYKTSFGHRNH--VFNFLPKG 78

Query: 296 TPIPPSGPSRGHNSV 252
            PIPPSGPS+ HNS+
Sbjct: 79  VPIPPSGPSKRHNSI 93


>ref|XP_003518833.1| PREDICTED: protein IDA-LIKE 1-like [Glycine max]
          Length = 95

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 455 LIFLVLFILPCCCTSTRSGGTVIIADGLSPQR-QHKLEVGIRYQAWVFNYFPKGTPIPPS 279
           L+F+ L ++  C  + R G T+ + +     + +H  + G  Y++ VFN+FPKG+ +PPS
Sbjct: 22  LLFVYLLLIGSC-DAIRMGQTMKLNERREILKGKHNNQHGFPYKSMVFNFFPKGS-VPPS 79

Query: 278 GPSRGHNSVVDSVLHN 231
           GPS+ HN+VVDS  +N
Sbjct: 80  GPSKRHNAVVDSTPNN 95


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