BLASTX nr result
ID: Coptis24_contig00014557
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014557 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|... 83 2e-14 ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm... 72 6e-11 ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9... 70 1e-10 ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus] 70 1e-10 gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic se... 67 2e-09 >ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3| unnamed protein product [Vitis vinifera] Length = 419 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 2/63 (3%) Frame = +1 Query: 22 AQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRTLQS 195 AQYES+ SML LRDQVLSMNC SFA+T+SER+ LRN ++IWE VKNSP+ + +TLQS Sbjct: 354 AQYESYTSMLWKLRDQVLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQS 413 Query: 196 WGM 204 GM Sbjct: 414 SGM 416 >ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis] gi|223540789|gb|EEF42349.1| conserved hypothetical protein [Ricinus communis] Length = 380 Score = 71.6 bits (174), Expect = 6e-11 Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 2/60 (3%) Frame = +1 Query: 22 AQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRTLQS 195 AQ+ES++S L LRD+VLSMNC SFA+TVSER+ L+N ++IWE VKNS + + RTLQ+ Sbjct: 273 AQHESYISALWKLRDEVLSMNCPSFARTVSERDWLKNSAKIWELVKNSSIIAEYSRTLQN 332 >ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus] Length = 411 Score = 70.5 bits (171), Expect = 1e-10 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Frame = +1 Query: 13 TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186 +T QYESF L LRDQVLSMN SF +TVSER+ L+N +IWESVK+SP+ RT Sbjct: 343 STRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYART 402 Query: 187 LQSWGM 204 LQS GM Sbjct: 403 LQSSGM 408 >ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus] Length = 412 Score = 70.5 bits (171), Expect = 1e-10 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Frame = +1 Query: 13 TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186 +T QYESF L LRDQVLSMN SF +TVSER+ L+N +IWESVK+SP+ RT Sbjct: 344 STRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYART 403 Query: 187 LQSWGM 204 LQS GM Sbjct: 404 LQSSGM 409 >gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic sequence gi|383152191|gb|AFG58155.1| Pinus taeda anonymous locus 0_15524_02 genomic sequence Length = 74 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Frame = +1 Query: 13 TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186 +T Q ES+ SML LRDQVLSM SFA+ +SER+ LRN ++IW+ VK SPV + +T Sbjct: 6 STKIQLESYTSMLKQLRDQVLSMPRRSFARPISERDWLRNAARIWDMVKRSPVIAEYSKT 65 Query: 187 LQSWGM 204 LQS G+ Sbjct: 66 LQSSGL 71