BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014557
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...    83   2e-14
ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...    70   1e-10
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]     70   1e-10
gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic se...    67   2e-09

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = +1

Query: 22  AQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRTLQS 195
           AQYES+ SML  LRDQVLSMNC SFA+T+SER+ LRN ++IWE VKNSP+ +   +TLQS
Sbjct: 354 AQYESYTSMLWKLRDQVLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQS 413

Query: 196 WGM 204
            GM
Sbjct: 414 SGM 416


>ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis]
           gi|223540789|gb|EEF42349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  AQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRTLQS 195
           AQ+ES++S L  LRD+VLSMNC SFA+TVSER+ L+N ++IWE VKNS + +   RTLQ+
Sbjct: 273 AQHESYISALWKLRDEVLSMNCPSFARTVSERDWLKNSAKIWELVKNSSIIAEYSRTLQN 332


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 13  TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186
           +T  QYESF   L  LRDQVLSMN  SF +TVSER+ L+N  +IWESVK+SP+     RT
Sbjct: 343 STRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYART 402

Query: 187 LQSWGM 204
           LQS GM
Sbjct: 403 LQSSGM 408


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 13  TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186
           +T  QYESF   L  LRDQVLSMN  SF +TVSER+ L+N  +IWESVK+SP+     RT
Sbjct: 344 STRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYART 403

Query: 187 LQSWGM 204
           LQS GM
Sbjct: 404 LQSSGM 409


>gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic sequence
           gi|383152191|gb|AFG58155.1| Pinus taeda anonymous locus
           0_15524_02 genomic sequence
          Length = 74

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 13  TTGAQYESFVSMLGNLRDQVLSMNCHSFAKTVSERERLRNCSQIWESVKNSPVFS--IRT 186
           +T  Q ES+ SML  LRDQVLSM   SFA+ +SER+ LRN ++IW+ VK SPV +   +T
Sbjct: 6   STKIQLESYTSMLKQLRDQVLSMPRRSFARPISERDWLRNAARIWDMVKRSPVIAEYSKT 65

Query: 187 LQSWGM 204
           LQS G+
Sbjct: 66  LQSSGL 71