BLASTX nr result
ID: Coptis24_contig00014555
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014555 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine ... 118 6e-25 ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cuc... 117 1e-24 gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris] 115 5e-24 ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly... 115 5e-24 ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Gly... 114 8e-24 >ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine max] Length = 363 Score = 118 bits (295), Expect = 6e-25 Identities = 59/84 (70%), Positives = 67/84 (79%) Frame = -2 Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103 VRF+MGH K+ L+ V D+ FVWTY SPEFPM+QE+ LQKFKLP+PV CIGGI Sbjct: 198 VRFKMGHPKASLD--------VADDEMFVWTYNSPEFPMSQENRLQKFKLPEPVLCIGGI 249 Query: 102 LQIELLGRVQRQELDGLFYICVSH 31 LQIELLGRVQRQE+DGL YICVSH Sbjct: 250 LQIELLGRVQRQEMDGLLYICVSH 273 >ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus] Length = 368 Score = 117 bits (293), Expect = 1e-24 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 3/87 (3%) Frame = -2 Query: 282 VRFRMGHLKSLLEMETGFVDAVH---TDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCI 112 VRFR GHL +++ + V H + F+WTY SPEFPM QES LQ+FKLP+PV CI Sbjct: 197 VRFRFGHLTHVIDHRSDLVGESHCGSAKETFIWTYTSPEFPMAQESYLQRFKLPEPVLCI 256 Query: 111 GGILQIELLGRVQRQELDGLFYICVSH 31 GGILQ+ELLGRVQRQE D LFYICVSH Sbjct: 257 GGILQVELLGRVQRQETDALFYICVSH 283 >gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris] Length = 363 Score = 115 bits (287), Expect = 5e-24 Identities = 56/84 (66%), Positives = 65/84 (77%) Frame = -2 Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103 VRF+MGH K L+ ++ FVWTY SPEFPM+QE+ LQKFKLP+PV CIGGI Sbjct: 197 VRFKMGHPKDSLD--------AFDEELFVWTYTSPEFPMSQENRLQKFKLPEPVLCIGGI 248 Query: 102 LQIELLGRVQRQELDGLFYICVSH 31 LQIELLGRVQRQE+DGL Y+CVSH Sbjct: 249 LQIELLGRVQRQEMDGLLYMCVSH 272 >ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max] Length = 374 Score = 115 bits (287), Expect = 5e-24 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 5/89 (5%) Frame = -2 Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDY-----FVWTYVSPEFPMTQESCLQKFKLPQPVP 118 VRFRMGH + +E+E+ VD + T+D F+WTY SPEFPM QE+ LQKFKLP+PV Sbjct: 197 VRFRMGHPRHPMELESA-VDKMATNDVLGDNQFIWTYTSPEFPMFQENRLQKFKLPEPVL 255 Query: 117 CIGGILQIELLGRVQRQELDGLFYICVSH 31 CIGG+L +ELLGRVQ+QE+D LFYIC+SH Sbjct: 256 CIGGVLLVELLGRVQKQEMDELFYICISH 284 >ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Glycine max] Length = 364 Score = 114 bits (285), Expect = 8e-24 Identities = 55/84 (65%), Positives = 65/84 (77%) Frame = -2 Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103 VRF+MGH K+ L+ D+ FVWTY SPEFPM++E+ LQKFKLP+PV CIGG Sbjct: 198 VRFKMGHPKASLDATD--------DEMFVWTYTSPEFPMSKENRLQKFKLPEPVLCIGGF 249 Query: 102 LQIELLGRVQRQELDGLFYICVSH 31 LQIELLGR+QRQE+DGL YICVSH Sbjct: 250 LQIELLGRIQRQEMDGLLYICVSH 273