BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014555
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine ...   118   6e-25
ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cuc...   117   1e-24
gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]                 115   5e-24
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...   115   5e-24
ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Gly...   114   8e-24

>ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine max]
          Length = 363

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/84 (70%), Positives = 67/84 (79%)
 Frame = -2

Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103
           VRF+MGH K+ L+        V  D+ FVWTY SPEFPM+QE+ LQKFKLP+PV CIGGI
Sbjct: 198 VRFKMGHPKASLD--------VADDEMFVWTYNSPEFPMSQENRLQKFKLPEPVLCIGGI 249

Query: 102 LQIELLGRVQRQELDGLFYICVSH 31
           LQIELLGRVQRQE+DGL YICVSH
Sbjct: 250 LQIELLGRVQRQEMDGLLYICVSH 273


>ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
          Length = 368

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
 Frame = -2

Query: 282 VRFRMGHLKSLLEMETGFVDAVH---TDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCI 112
           VRFR GHL  +++  +  V   H     + F+WTY SPEFPM QES LQ+FKLP+PV CI
Sbjct: 197 VRFRFGHLTHVIDHRSDLVGESHCGSAKETFIWTYTSPEFPMAQESYLQRFKLPEPVLCI 256

Query: 111 GGILQIELLGRVQRQELDGLFYICVSH 31
           GGILQ+ELLGRVQRQE D LFYICVSH
Sbjct: 257 GGILQVELLGRVQRQETDALFYICVSH 283


>gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]
          Length = 363

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/84 (66%), Positives = 65/84 (77%)
 Frame = -2

Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103
           VRF+MGH K  L+           ++ FVWTY SPEFPM+QE+ LQKFKLP+PV CIGGI
Sbjct: 197 VRFKMGHPKDSLD--------AFDEELFVWTYTSPEFPMSQENRLQKFKLPEPVLCIGGI 248

Query: 102 LQIELLGRVQRQELDGLFYICVSH 31
           LQIELLGRVQRQE+DGL Y+CVSH
Sbjct: 249 LQIELLGRVQRQEMDGLLYMCVSH 272


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 5/89 (5%)
 Frame = -2

Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDY-----FVWTYVSPEFPMTQESCLQKFKLPQPVP 118
           VRFRMGH +  +E+E+  VD + T+D      F+WTY SPEFPM QE+ LQKFKLP+PV 
Sbjct: 197 VRFRMGHPRHPMELESA-VDKMATNDVLGDNQFIWTYTSPEFPMFQENRLQKFKLPEPVL 255

Query: 117 CIGGILQIELLGRVQRQELDGLFYICVSH 31
           CIGG+L +ELLGRVQ+QE+D LFYIC+SH
Sbjct: 256 CIGGVLLVELLGRVQKQEMDELFYICISH 284


>ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 364

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/84 (65%), Positives = 65/84 (77%)
 Frame = -2

Query: 282 VRFRMGHLKSLLEMETGFVDAVHTDDYFVWTYVSPEFPMTQESCLQKFKLPQPVPCIGGI 103
           VRF+MGH K+ L+           D+ FVWTY SPEFPM++E+ LQKFKLP+PV CIGG 
Sbjct: 198 VRFKMGHPKASLDATD--------DEMFVWTYTSPEFPMSKENRLQKFKLPEPVLCIGGF 249

Query: 102 LQIELLGRVQRQELDGLFYICVSH 31
           LQIELLGR+QRQE+DGL YICVSH
Sbjct: 250 LQIELLGRIQRQEMDGLLYICVSH 273