BLASTX nr result

ID: Coptis24_contig00014548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014548
         (2580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g...    87   3e-14
gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japo...    87   3e-14
gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi...    87   3e-14
gb|EEC79648.1| hypothetical protein OsI_20883 [Oryza sativa Indi...    87   3e-14
gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japo...    86   7e-14

>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
            Os11g0106066 [Oryza sativa Japonica Group]
          Length = 1690

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
 Frame = -1

Query: 2139 EDLHRIWQTKGRINMDRIDREHVQICFEDPLEYTHVASNGPWMMKGHIFSVKEWVKGRGL 1960
            ED+ R W+ +  ++   +      + F    ++  V   GPW+ +G    V ++      
Sbjct: 349  EDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFNGLLSP 408

Query: 1959 DEYQFDYVQFWIQIWDLPKDRINKANVWKIGAELGKVLEADLSCPPEFNQPVARVRVELD 1780
                 + V  W++I+DLP   +NKA     G++LGKV E D+           R+RV+L 
Sbjct: 409  SMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREEDVQQDGSNKHDFFRIRVDLP 468

Query: 1779 IKERLQKDQQVRLETGVVKLVR---LKYEKLEVFCYFCGIIGHEQYACRTR 1636
            +   L++   ++++   V+ +R   L+YE++  FC+FCG IGH    C  R
Sbjct: 469  VNRPLKRQIAIKIKIKGVEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKR 519


>gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japonica Group]
          Length = 1322

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
 Frame = -1

Query: 2139 EDLHRIWQTKGRINMDRIDREHVQICFEDPLEYTHVASNGPWMMKGHIFSVKEWVKGRGL 1960
            ED+ R W+ +  ++   +      + F    ++  V   GPW+ +G    V ++      
Sbjct: 244  EDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFNGLLSP 303

Query: 1959 DEYQFDYVQFWIQIWDLPKDRINKANVWKIGAELGKVLEADLSCPPEFNQPVARVRVELD 1780
                 + V  W++I+DLP   +NKA     G++LGKV E D+           R+RV+L 
Sbjct: 304  SMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREEDVQQDGSNKHDFFRIRVDLP 363

Query: 1779 IKERLQKDQQVRLETGVVKLVR---LKYEKLEVFCYFCGIIGHEQYACRTR 1636
            +   L++   ++++   V+ +R   L+YE++  FC+FCG IGH    C  R
Sbjct: 364  VNRPLKRQIAIKIKIKGVEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKR 414


>gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
          Length = 754

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
 Frame = -1

Query: 2202 EKQTLIGKLYGGYPISLEEAGEDLHRIWQTKGRINMDRIDREHVQICFEDPLEYTHVASN 2023
            +K T++ + Y     +     ED+ R W+ +  +N   +      I F +  ++  V   
Sbjct: 202  DKWTVLARFYSIRTPNQVALFEDMSRAWRLRSDMNYKSLRDNLFIIAFSNEGDFKFVTQG 261

Query: 2022 GPWMMKGHIFSVKEWVKGRGLDEYQFDYVQFWIQIWDLPKDRINKANVWKIGAELGKVLE 1843
            GPW+ +G    V E+           + V  WI+I+DLP   + KA     G++ G+V E
Sbjct: 262  GPWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELYGSKFGRVRE 321

Query: 1842 ADLSCPPEFNQPVARVRVELDIKERLQKDQQVRLE---TGVVKLVRLKYEKLEVFCYFCG 1672
             D+           R+RV+L + + L+    +++    +  +K   ++YE++  FC+FCG
Sbjct: 322  VDVEADGRNRHDFFRIRVDLPVTKPLKSKIAIKINVHGSEEIKRFDVRYERIPYFCFFCG 381

Query: 1671 IIGHEQYAC 1645
             IGH    C
Sbjct: 382  FIGHSDKDC 390


>gb|EEC79648.1| hypothetical protein OsI_20883 [Oryza sativa Indica Group]
          Length = 456

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
 Frame = -1

Query: 2202 EKQTLIGKLYGGYPISLEEAGEDLHRIWQTKGRINMDRIDREHVQICFEDPLEYTHVASN 2023
            +K T++ + Y     +     ED+ R W+ +  +N   +      I F +  ++  V   
Sbjct: 101  DKWTVLARFYSIRTPNQVALFEDMSRAWRLRSDMNYKSLRDNLFIIAFSNEGDFKFVTQG 160

Query: 2022 GPWMMKGHIFSVKEWVKGRGLDEYQFDYVQFWIQIWDLPKDRINKANVWKIGAELGKVLE 1843
            GPW+ +G    V E+           + V  WI+I+DLP   + KA     G++ G+V E
Sbjct: 161  GPWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELYGSKFGRVRE 220

Query: 1842 ADLSCPPEFNQPVARVRVELDIKERLQKDQQVRLE---TGVVKLVRLKYEKLEVFCYFCG 1672
             D+           R+RV+L + + L+    +++    +  +K   ++YE++  FC+FCG
Sbjct: 221  VDVEADGRNRHDFFRIRVDLPVTKPLKSKIAIKINVHGSEEIKRFDVRYERIPYFCFFCG 280

Query: 1671 IIGHEQYAC 1645
             IGH    C
Sbjct: 281  FIGHSDKDC 289


>gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japonica Group]
          Length = 901

 Score = 85.5 bits (210), Expect = 7e-14
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
 Frame = -1

Query: 2139 EDLHRIWQTKGRINMDRIDREHVQICFEDPLEYTHVASNGPWMMKGHIFSVKEWVKGRGL 1960
            ED+ R W+ +  ++   +      + F    ++  V   GPW+ +G    V ++      
Sbjct: 296  EDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFNGLLSP 355

Query: 1959 DEYQFDYVQFWIQIWDLPKDRINKANVWKIGAELGKVLEADLSCPPEFNQPVARVRVELD 1780
                 + V  W++I+DLP   +NKA     G++LGKV E D+           R+RV+L 
Sbjct: 356  SMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREVDVQQNGSNKHDFFRIRVDLP 415

Query: 1779 IKERLQKDQQVRLETGVVKLVR---LKYEKLEVFCYFCGIIGHEQYACRTRNQYRYDLTK 1609
            +   L++   ++++    + +R   L+YE++  FC+FCG IGH    C  R     +   
Sbjct: 416  VNRPLKRQIAIKIKIKGAEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKRLANEAEPLM 475

Query: 1608 CGGSVK 1591
            C   ++
Sbjct: 476  CSADLR 481


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