BLASTX nr result

ID: Coptis24_contig00014544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014544
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indi...   204   6e-51
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   201   4e-50
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823...   183   1e-44
ref|XP_002516098.1| conserved hypothetical protein [Ricinus comm...   182   3e-44

>gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
          Length = 232

 Score =  204 bits (519), Expect = 6e-51
 Identities = 104/172 (60%), Positives = 128/172 (74%), Gaps = 8/172 (4%)
 Frame = -2

Query: 494 LRPGAYGLDTFAGLASHTAPGFSGLISGASLKGFPSPLEDPALSSRG--------IPELL 339
           L+P AYGLD  AG +     G  GL +G + +G PSPLEDPAL  R         IP++ 
Sbjct: 53  LQPRAYGLDGAAGASHPALAGLGGLAAGTTARG-PSPLEDPALVRRSSSLGKTASIPDV- 110

Query: 338 NERPSSLRKIDSVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRD 159
            E P  L  +D    +ES+ILFVDGLP+DCTRRE+AHLFRPF+GFK++RLVHKEPRHS D
Sbjct: 111 -EHPRPLLNLDGPREDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSD 169

Query: 158 KAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPSS 3
           +A VLCFVEFSDAKCA+TAMEALQ Y+FDE+KPDA +L I+FA+FPF P ++
Sbjct: 170 RAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFARFPFRPAAA 221


>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  201 bits (512), Expect = 4e-50
 Identities = 102/175 (58%), Positives = 127/175 (72%), Gaps = 12/175 (6%)
 Frame = -2

Query: 494 LRPGAYGLDTFAGLASHTAPGFSGLISGASLKGFPSPLEDPALS----------SRGIPE 345
           +RPGA+  D   G+     P   G  +  ++KG+P+P+EDP L           S GIP+
Sbjct: 59  VRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPD 118

Query: 344 LLNERPSSLRKIDSVLG--EESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPR 171
           +  ERPSS   ++S+    +ES+ILFVDGLP DCTRRE+ HLFRPFIGFKE+R+VHKEPR
Sbjct: 119 I--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPR 176

Query: 170 HSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 6
           HS DKAMVLCFVEF+DA C+ TA+EALQGYKFD+KKPD+P L+IQFA FPF  PS
Sbjct: 177 HSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 231


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  198 bits (504), Expect = 3e-49
 Identities = 101/152 (66%), Positives = 120/152 (78%), Gaps = 12/152 (7%)
 Frame = -2

Query: 425 GLISGASLKGFPSPLEDPAL-SSRG---------IPELLNERPSSLRKIDS--VLGEESS 282
           G I G++ KG+PSPLEDP+L S RG         IP+++N+RP SLR  D   V   ES+
Sbjct: 115 GAIPGSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMINDRPGSLRSADGPPVPKGESN 174

Query: 281 ILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDAKCALTA 102
           ILFVDGLP+DCTRRE+ HLFRPFIG+KE+R+VHKE R S D+A VLCFVEF+DA CA TA
Sbjct: 175 ILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAATA 234

Query: 101 MEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 6
           MEALQGYKFD+KKPD+P LKIQFA+FPF PPS
Sbjct: 235 MEALQGYKFDDKKPDSPTLKIQFARFPFRPPS 266


>ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
           distachyon]
          Length = 209

 Score =  183 bits (465), Expect = 1e-44
 Identities = 102/181 (56%), Positives = 124/181 (68%), Gaps = 21/181 (11%)
 Frame = -2

Query: 482 AYGLDTFAGLASHTAPGFSGLISGAS-LKGFP------------SPLEDPALSSRG---- 354
           AYGLD   G++     G   L +GA  L+  P            SPLED AL  R     
Sbjct: 21  AYGLDGPTGVSHPALAGLGALPAGARPLETSPLEPPAVARPRGASPLEDQALVRRSSSLG 80

Query: 353 ----IPELLNERPSSLRKIDSVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLV 186
               IP++  ERP+ +  ID    +ES+ILFVDGLP+DC RRE+AHLFRPF+GFK+LRLV
Sbjct: 81  RTATIPDI--ERPNPVLNIDRPSEDESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLV 138

Query: 185 HKEPRHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 6
           HKEPR S DKA VLCFVEF+DAKCA TAM+ALQ Y+FDE+KPDAP+LKIQFA+FPF  P+
Sbjct: 139 HKEPRRSGDKAYVLCFVEFNDAKCAFTAMQALQEYRFDERKPDAPVLKIQFARFPFRLPA 198

Query: 5   S 3
           +
Sbjct: 199 A 199


>ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
           gi|223544584|gb|EEF46100.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  182 bits (461), Expect = 3e-44
 Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 16/177 (9%)
 Frame = -2

Query: 491 RPGAYGLDTFAGLASHTAPGFSGLISGASLKGFPSPLEDPALSSR------------GIP 348
           +P +YGL+      +   P  SG+I GAS +G+ SPL DP+L S              IP
Sbjct: 58  QPVSYGLNNSN---NDDIPVRSGVIPGASSRGYLSPLNDPSLPSHRLRDTSVNVTTLAIP 114

Query: 347 ELLNERPSSLRKID----SVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHK 180
           +++N++P +  +I+    SV   ES+ILFVDGLP+DCTRRE+ HLFRPFIG+K+++++H+
Sbjct: 115 DVINDQPPNYLRINADSPSVSRTESNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHR 174

Query: 179 EPRHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPP 9
           EPR   DKAMV CFVEF+DAKCA+TAMEALQGYKFD+++ ++P+L+I  A+FPF PP
Sbjct: 175 EPRRDGDKAMVYCFVEFADAKCAITAMEALQGYKFDDRRSNSPVLRIHLARFPFRPP 231


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