BLASTX nr result

ID: Coptis24_contig00014542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014542
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279479.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...   387   e-105
ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...   383   e-104
emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]   380   e-103
ref|XP_002315283.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93
ref|XP_002529709.1| conserved hypothetical protein [Ricinus comm...   344   3e-92

>ref|XP_002279479.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 479

 Score =  387 bits (995), Expect = e-105
 Identities = 219/361 (60%), Positives = 257/361 (71%), Gaps = 5/361 (1%)
 Frame = -1

Query: 1296 KEELAAIRIQTAFRGYLARMALRALRGIVRLKTLLDGDSVKRQTKTTLRCMQTLAHMQSQ 1117
            KEE AAI+IQTAFRGYLAR ALRALRG+VRL++L+ G +VKRQ   TLRCMQTLA +QSQ
Sbjct: 110  KEEAAAIKIQTAFRGYLARRALRALRGLVRLQSLIQGTAVKRQAANTLRCMQTLARVQSQ 169

Query: 1116 VQAGRSRMSE-NLALQRQLLQKHENELDSSKVGENWDDSSQSKEQVEANLLHKQDAARRR 940
            +   R RMSE N ALQRQLLQK   E +  K+GE WDDS QSKEQ+EA LL+KQ AA RR
Sbjct: 170  ICYRRIRMSEENQALQRQLLQKQAKEFEQLKMGEEWDDSLQSKEQIEAGLLNKQGAAMRR 229

Query: 939  ERGLAYAFSHQSR-KNSSRSTNVTFMDPNNPHWGWSWLERWTESQPSESRSTLDKGLNNE 763
            ER LAYAFSHQ   KNSS+STN+ FMDP+NPHWGWSWLERW  ++P ESRST DK LNN+
Sbjct: 230  ERALAYAFSHQQAWKNSSKSTNLLFMDPSNPHWGWSWLERWMAARPWESRSTTDKELNND 289

Query: 762  QSSLKSRSLSV-GGEITKAYTRREPIAERPSPIAKKLXXXXXXXXXXXXXXXTA-SLPLV 589
            Q S+KS S S+ GGEITKAY R    + +PSP A +                 A S    
Sbjct: 290  QLSIKSGSRSITGGEITKAYARHLLDSSKPSPTASQKPYHPPARQSPSTPPSKAVSSSSA 349

Query: 588  TGNIK-SASPIGAMQALDDDTSSTFSLKSERYRRSSVSELLVGDEESLASTPAVPSYMAP 412
             G  K +ASP G +   DDDT S  S++SER+RR S++   VGD+ESLAS+PAVPSYMAP
Sbjct: 350  AGKFKPAASPRGNLWGQDDDTKSMVSIQSERFRRHSIAGSSVGDDESLASSPAVPSYMAP 409

Query: 411  TKSAKAKARLQSPLGVEQNETSEGRSVGSAKKQLSFKEMASPKGPRRHSVSSKVNDSPVK 232
            TKSAKAK+RLQSPLG+E N T E  S G AKK+LSF   ASP  PRRHS   +V  S + 
Sbjct: 410  TKSAKAKSRLQSPLGLENNGTPEKGSSGIAKKRLSFP--ASPARPRRHSGPPRVESSSLT 467

Query: 231  D 229
            +
Sbjct: 468  E 468


>ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 482

 Score =  383 bits (984), Expect = e-104
 Identities = 215/363 (59%), Positives = 263/363 (72%), Gaps = 8/363 (2%)
 Frame = -1

Query: 1296 KEELAAIRIQTAFRGYLARMALRALRGIVRLKTLLDGDSVKRQTKTTLRCMQTLAHMQSQ 1117
            KEE+AAI+IQTAFRGYLAR ALRALRG+VRLK+L+ G SVKRQ  TTLRCMQTLA +QSQ
Sbjct: 115  KEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQ 174

Query: 1116 VQAGRSRMSE-NLALQRQLLQKHENELDS--SKVGENWDDSSQSKEQVEANLLHKQDAAR 946
            ++A R RMSE NLALQRQL  K + EL+   + +G++WDDS QSKEQ+EANL  KQ+AA 
Sbjct: 175  IRARRIRMSEENLALQRQLQLKRDKELEKLRASMGDDWDDSVQSKEQIEANLQSKQEAAV 234

Query: 945  RRERGLAYAFSHQSR-KNSSRSTNVTFMDPNNPHWGWSWLERWTESQPSESRSTLDKGLN 769
            RRER LAYAFSHQ   KNSS+  N TFMDPNNPHWGWSWLERW  ++P ESRS ++K LN
Sbjct: 235  RRERALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARPWESRSAMEKELN 294

Query: 768  NEQSSLKS---RSLSVGGEITKAYTRRE-PIAERPSPIAKKLXXXXXXXXXXXXXXXTAS 601
             + +SLKS   R+ S+G EI+KAY RR+  + ++PSP A+K                  S
Sbjct: 295  TDHASLKSTTSRAFSIG-EISKAYARRDLNLDKKPSPTAQKPSRPPSRQSPSTPPSKAQS 353

Query: 600  LPLVTGNIKSASPIGAMQALDDDTSSTFSLKSERYRRSSVSELLVGDEESLASTPAVPSY 421
               VTG  K ASP G+    DDD+ S  S++SERYRR S++  LV D+ESLAS+PAVPSY
Sbjct: 354  SSSVTGKTKPASPKGSGWGADDDSRSMLSIQSERYRRHSIAGSLVRDDESLASSPAVPSY 413

Query: 420  MAPTKSAKAKARLQSPLGVEQNETSEGRSVGSAKKQLSFKEMASPKGPRRHSVSSKVNDS 241
            MA T+S +A++RL SPLG+E+N T E  S  SAKK+LSF   ASP GPRRHS   +V  S
Sbjct: 414  MASTESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFP--ASPAGPRRHSGPPRVETS 471

Query: 240  PVK 232
             +K
Sbjct: 472  SIK 474


>emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]
          Length = 482

 Score =  380 bits (975), Expect = e-103
 Identities = 213/363 (58%), Positives = 262/363 (72%), Gaps = 8/363 (2%)
 Frame = -1

Query: 1296 KEELAAIRIQTAFRGYLARMALRALRGIVRLKTLLDGDSVKRQTKTTLRCMQTLAHMQSQ 1117
            KEE+AAI+IQTAFRGYLAR ALRALRG+VRLK+L+ G SVKRQ  TTLRCMQTLA +QSQ
Sbjct: 115  KEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQ 174

Query: 1116 VQAGRSRMS-ENLALQRQLLQKHENELDS--SKVGENWDDSSQSKEQVEANLLHKQDAAR 946
            ++A R RMS ENLALQRQL  K + EL+   + +G++WDDS QSKEQ+EANL  KQ+AA 
Sbjct: 175  IRARRIRMSEENLALQRQLQLKRDKELEKLRASIGDDWDDSVQSKEQIEANLQSKQEAAV 234

Query: 945  RRERGLAYAFSHQSR-KNSSRSTNVTFMDPNNPHWGWSWLERWTESQPSESRSTLDKGLN 769
            RRER LAYAFSHQ   KNSS+  N TFMDPNNPHWGWSWLERW  ++P ESRS ++K LN
Sbjct: 235  RRERALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARPWESRSAMEKELN 294

Query: 768  NEQSSLK---SRSLSVGGEITKAYTRRE-PIAERPSPIAKKLXXXXXXXXXXXXXXXTAS 601
             + +SLK   SR+ S+ GEI+KAY RR+  + ++PSP A+K                  S
Sbjct: 295  TDHASLKSTTSRAFSI-GEISKAYARRDLNLDKKPSPTAQKPSRPPSRQSPSTPPSKAQS 353

Query: 600  LPLVTGNIKSASPIGAMQALDDDTSSTFSLKSERYRRSSVSELLVGDEESLASTPAVPSY 421
               VTG  + ASP G+    DDD+ S  S++SE YRR S++  LV D+ESLAS+PAVPSY
Sbjct: 354  SSSVTGKTRPASPKGSGWGADDDSRSMLSIQSEWYRRHSIAGSLVRDDESLASSPAVPSY 413

Query: 420  MAPTKSAKAKARLQSPLGVEQNETSEGRSVGSAKKQLSFKEMASPKGPRRHSVSSKVNDS 241
            MA T+S +A++RL SPLG+E+N T E  S  SAKK+LSF   ASP GPRRHS   +V  S
Sbjct: 414  MASTESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFP--ASPAGPRRHSGPPRVETS 471

Query: 240  PVK 232
             +K
Sbjct: 472  SIK 474


>ref|XP_002315283.1| predicted protein [Populus trichocarpa] gi|222864323|gb|EEF01454.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  347 bits (891), Expect = 3e-93
 Identities = 200/359 (55%), Positives = 244/359 (67%), Gaps = 5/359 (1%)
 Frame = -1

Query: 1296 KEELAAIRIQTAFRGYLARMALRALRGIVRLKTLLDGDSVKRQTKTTLRCMQTLAHMQSQ 1117
            KEE+AAIRIQTAFRGYLAR ALRALRG+VRLK+L+ G SVKRQ   TLR MQTLA +QSQ
Sbjct: 109  KEEIAAIRIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATATLRAMQTLARVQSQ 168

Query: 1116 VQAGRSRMS-ENLALQRQLLQKHENELDSSKVG-ENWDDSSQSKEQVEANLLHKQDAARR 943
            ++A R RMS EN ALQRQL QKH+ EL+  +   + WDDS QSKE+VEA+LL KQ+AA R
Sbjct: 169  IRARRIRMSEENEALQRQLQQKHDKELEKLRTSVKQWDDSPQSKEEVEASLLQKQEAAMR 228

Query: 942  RERGLAYAFSHQSR-KNSSRSTNVTFMDPNNPHWGWSWLERWTESQPSESRSTLDKGLNN 766
            RER LAYA+SHQ   K SS+S N TFMDPNNP WGWSWLERW  ++P ESRST+D   NN
Sbjct: 229  RERALAYAYSHQQMWKQSSKSANATFMDPNNPRWGWSWLERWMAARPWESRSTID---NN 285

Query: 765  EQSSLKSRSLSVGGEITKAYTRREPIAERPSPIAKKLXXXXXXXXXXXXXXXTASLPLVT 586
            +++S+KS +                    PSP A+K                  S   VT
Sbjct: 286  DRASVKSTT-------------------SPSPGAQKSSRPPSRQSPSTPPSKAPSTSSVT 326

Query: 585  GNIKSASPIGAMQALDDDTSSTFSLKSERYRRSSVSELLVGDEESLASTPAVPSYMAPTK 406
            G  K  SP G+    D+D+ STFS++SERYRR S++   + D+ESLAS+P+VPSYMAPT+
Sbjct: 327  GKAKPPSPRGSAWGGDEDSRSTFSVQSERYRRHSIAGSSIRDDESLASSPSVPSYMAPTR 386

Query: 405  --SAKAKARLQSPLGVEQNETSEGRSVGSAKKQLSFKEMASPKGPRRHSVSSKVNDSPV 235
              SAKAK+RL SPLG++ N T +  SVG  KK+LSF   ASP G RRHS   +V+ S V
Sbjct: 387  SQSAKAKSRLSSPLGIDNNGTPDKASVGYVKKRLSFS--ASPAGARRHSGPPRVDASAV 443


>ref|XP_002529709.1| conserved hypothetical protein [Ricinus communis]
            gi|223530811|gb|EEF32675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 461

 Score =  344 bits (882), Expect = 3e-92
 Identities = 202/377 (53%), Positives = 254/377 (67%), Gaps = 6/377 (1%)
 Frame = -1

Query: 1296 KEELAAIRIQTAFRGYLARMALRALRGIVRLKTLLDGDSVKRQTKTTLRCMQTLAHMQSQ 1117
            +EE+AAI+IQTAFRGYLAR ALRALRG+VRLKTL+ G SVKRQ   TLR MQTLA +QSQ
Sbjct: 115  REEVAAIKIQTAFRGYLARRALRALRGLVRLKTLIQGQSVKRQAANTLRAMQTLARVQSQ 174

Query: 1116 VQAGRSRMSE-NLALQRQLLQKHENELDS--SKVGENWDDSSQSKEQVEANLLHKQDAAR 946
            ++A R+RMSE N ALQRQL QK E EL+   S +GE WDDS+QSKEQ             
Sbjct: 175  IRARRARMSEENQALQRQLQQKREKELEKLRSAIGEQWDDSAQSKEQ------------- 221

Query: 945  RRERGLAYAFSHQSRKNSSRSTNVTFMDPNNPHWGWSWLERWTESQPSESRSTLDKGLNN 766
                        Q+ KNSS+S N TFMDPNNPHWGWSWLERW  ++P ESRST+D   NN
Sbjct: 222  ------------QAWKNSSKSANATFMDPNNPHWGWSWLERWMAARPWESRSTVD---NN 266

Query: 765  EQSSLKS---RSLSVGGEITKAYTRREPIAERPSPIAKKLXXXXXXXXXXXXXXXTASLP 595
            +++S+KS   R+LS+G EI++AY+RR+   ++PSP A+K                  S  
Sbjct: 267  DRASVKSTMSRALSIG-EISRAYSRRDLDHDKPSPGAQKSTRLPSRQSPSTPPSKAPSTS 325

Query: 594  LVTGNIKSASPIGAMQALDDDTSSTFSLKSERYRRSSVSELLVGDEESLASTPAVPSYMA 415
             VTG IK  SP G+    DDD+ S FS++SERYRR S++   V D+ESLAS+P+VPSYMA
Sbjct: 326  SVTGKIKPPSPRGSAWGGDDDSRSLFSVQSERYRRHSIAGSSVRDDESLASSPSVPSYMA 385

Query: 414  PTKSAKAKARLQSPLGVEQNETSEGRSVGSAKKQLSFKEMASPKGPRRHSVSSKVNDSPV 235
            PT+SAKAK+RL SPLGV+++ T +  SV SAKK+LSF    SP G RRHS   +VN S +
Sbjct: 386  PTQSAKAKSRLPSPLGVDKDGTRDKASVASAKKRLSFS--GSPAGLRRHSGPPRVNSSIM 443

Query: 234  KDSEAT*KKYEHMGVSG 184
             + E   ++  + G SG
Sbjct: 444  NNIEMHIEEQVNKGESG 460


Top