BLASTX nr result

ID: Coptis24_contig00014531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014531
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|NP_191462.1| protein TRANSPARENT TESTA 12 [Arabidopsis thali...   132   4e-29
ref|XP_002300856.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
gb|ACJ36215.1| transparent testa 12 [Brassica oleracea var. acep...   130   9e-29

>ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|222857021|gb|EEE94568.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/108 (58%), Positives = 85/108 (78%)
 Frame = +2

Query: 2   VTQMFVGRHLGTMALAGASMATLEVQGFAFIVMSGMAIAVQTSCGEAYRTRKYDSLGVIC 181
           VTQMF G HLG + LAGAS+A + +QG A+ +M GMA AVQT CG+AY  +KY S+G+IC
Sbjct: 73  VTQMFSG-HLGALELAGASIANVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYSSMGIIC 131

Query: 182 QQGVIVQLGAAVMLSFLYWYSGTVLQTLGLWAAIADQTQIFARGLLPQ 325
           Q+ +I+ LGAA +L+FLYW+SG VL+ +G   +IA+Q +IFARGL+PQ
Sbjct: 132 QRAIILHLGAAFLLTFLYWFSGPVLRAIGQTESIAEQGEIFARGLIPQ 179


>ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|222857020|gb|EEE94567.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/108 (58%), Positives = 85/108 (78%)
 Frame = +2

Query: 2   VTQMFVGRHLGTMALAGASMATLEVQGFAFIVMSGMAIAVQTSCGEAYRTRKYDSLGVIC 181
           VTQMF G HLG + LAGAS+A + +QG A+ +M GMA AVQT CG+AY  +KY S+G+IC
Sbjct: 73  VTQMFSG-HLGALELAGASIANVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYSSMGIIC 131

Query: 182 QQGVIVQLGAAVMLSFLYWYSGTVLQTLGLWAAIADQTQIFARGLLPQ 325
           Q+ +I+ LGAA +L+FLYW+SG VL+ +G   +IA+Q +IFARGL+PQ
Sbjct: 132 QRAIILHLGAAFLLTFLYWFSGPVLRAIGQTESIAEQGEIFARGLIPQ 179


>ref|NP_191462.1| protein TRANSPARENT TESTA 12 [Arabidopsis thaliana]
           gi|27151710|sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein
           TRANSPARENT TESTA 12; AltName: Full=MATE efflux family
           protein TT12; AltName: Full=Protein DTX41
           gi|7529746|emb|CAB86931.1| putative protein [Arabidopsis
           thaliana] gi|13624643|emb|CAC36941.1| multidrug
           transporter-like protein [Arabidopsis thaliana]
           gi|21618298|gb|AAM67348.1| unknown [Arabidopsis
           thaliana] gi|332646342|gb|AEE79863.1| protein
           TRANSPARENT TESTA 12 [Arabidopsis thaliana]
          Length = 507

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/108 (58%), Positives = 85/108 (78%)
 Frame = +2

Query: 2   VTQMFVGRHLGTMALAGASMATLEVQGFAFIVMSGMAIAVQTSCGEAYRTRKYDSLGVIC 181
           VT MF G HLG++ LAGAS+AT+ +QG A+ +M GMA AVQT CG+AY  R+Y S+G+IC
Sbjct: 75  VTVMFTG-HLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIIC 133

Query: 182 QQGVIVQLGAAVMLSFLYWYSGTVLQTLGLWAAIADQTQIFARGLLPQ 325
           Q+ +++ L AAV L+FLYWYSG +L+T+G   AIA + QIFARG++PQ
Sbjct: 134 QRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQ 181


>ref|XP_002300856.1| predicted protein [Populus trichocarpa] gi|222842582|gb|EEE80129.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/108 (59%), Positives = 85/108 (78%)
 Frame = +2

Query: 2   VTQMFVGRHLGTMALAGASMATLEVQGFAFIVMSGMAIAVQTSCGEAYRTRKYDSLGVIC 181
           VTQMF G HLG + LAGAS+A + +QG A+ +M GMA AVQT CG+AY  +KY S+G+IC
Sbjct: 71  VTQMFSG-HLGALELAGASIANVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYSSMGIIC 129

Query: 182 QQGVIVQLGAAVMLSFLYWYSGTVLQTLGLWAAIADQTQIFARGLLPQ 325
           Q+ +I+ LGAA +L+FLYW+SG VL+ +G   +IA+Q QIFARGL+PQ
Sbjct: 130 QKAIILHLGAAFLLTFLYWFSGPVLRGIGQSDSIAEQGQIFARGLIPQ 177


>gb|ACJ36215.1| transparent testa 12 [Brassica oleracea var. acephala]
           gi|212641738|gb|ACJ36216.1| transparent testa 12
           [Brassica oleracea var. acephala]
          Length = 507

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/108 (56%), Positives = 85/108 (78%)
 Frame = +2

Query: 2   VTQMFVGRHLGTMALAGASMATLEVQGFAFIVMSGMAIAVQTSCGEAYRTRKYDSLGVIC 181
           VT MF G HLG++ LAGAS+AT+ +QG A+ +M GMA AVQT CG+AY  R+Y S+G+IC
Sbjct: 75  VTVMFTG-HLGSLELAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIIC 133

Query: 182 QQGVIVQLGAAVMLSFLYWYSGTVLQTLGLWAAIADQTQIFARGLLPQ 325
           Q+ +++ L AAV+L+FLYWYSG +L+ +G   AIA + Q+FARG++PQ
Sbjct: 134 QRAMVLHLAAAVLLTFLYWYSGPILKAMGQTVAIAHEGQVFARGMIPQ 181


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