BLASTX nr result

ID: Coptis24_contig00014530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014530
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525444.1| conserved hypothetical protein [Ricinus comm...   269   2e-70
ref|XP_003548056.1| PREDICTED: uncharacterized protein LOC100819...   268   3e-70
ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medi...   268   3e-70
ref|XP_003632676.1| PREDICTED: uncharacterized protein LOC100253...   268   4e-70
emb|CBI29924.3| unnamed protein product [Vitis vinifera]              268   4e-70

>ref|XP_002525444.1| conserved hypothetical protein [Ricinus communis]
           gi|223535257|gb|EEF36934.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 889

 Score =  269 bits (687), Expect = 2e-70
 Identities = 133/135 (98%), Positives = 135/135 (100%)
 Frame = +2

Query: 110 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 289
           MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 290 QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK 469
           QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFK+CEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 470 TDPREKAKSETRDWL 514
           TDP+EKAKSETRDWL
Sbjct: 121 TDPKEKAKSETRDWL 135


>ref|XP_003548056.1| PREDICTED: uncharacterized protein LOC100819202 [Glycine max]
          Length = 892

 Score =  268 bits (686), Expect = 3e-70
 Identities = 133/135 (98%), Positives = 135/135 (100%)
 Frame = +2

Query: 110 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 289
           MGASRKLQGEIDRVLKKVQEGV+VFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 290 QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK 469
           QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFK+CEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 470 TDPREKAKSETRDWL 514
           TDPREKAKSETRDWL
Sbjct: 121 TDPREKAKSETRDWL 135


>ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|124365585|gb|ABN09819.1| Not CCR4-Not complex
           component, N-terminal; tRNA-binding arm [Medicago
           truncatula] gi|355499621|gb|AES80824.1| CCR4-NOT
           transcription complex subunit [Medicago truncatula]
          Length = 901

 Score =  268 bits (686), Expect = 3e-70
 Identities = 133/135 (98%), Positives = 135/135 (100%)
 Frame = +2

Query: 110 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 289
           MGASRKLQGEIDRVLKKVQEGV+VFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 290 QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK 469
           QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFK+CEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 470 TDPREKAKSETRDWL 514
           TDPREKAKSETRDWL
Sbjct: 121 TDPREKAKSETRDWL 135


>ref|XP_003632676.1| PREDICTED: uncharacterized protein LOC100253711 [Vitis vinifera]
          Length = 888

 Score =  268 bits (684), Expect = 4e-70
 Identities = 132/135 (97%), Positives = 135/135 (100%)
 Frame = +2

Query: 110 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 289
           MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 290 QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK 469
           QIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFK+CEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 470 TDPREKAKSETRDWL 514
           TDP+EKAKSETRDWL
Sbjct: 121 TDPKEKAKSETRDWL 135


>emb|CBI29924.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  268 bits (684), Expect = 4e-70
 Identities = 132/135 (97%), Positives = 135/135 (100%)
 Frame = +2

Query: 110 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 289
           MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
Sbjct: 1   MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD 60

Query: 290 QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK 469
           QIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFK+CEKETKTKAFSKEGLGQQPK
Sbjct: 61  QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK 120

Query: 470 TDPREKAKSETRDWL 514
           TDP+EKAKSETRDWL
Sbjct: 121 TDPKEKAKSETRDWL 135


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