BLASTX nr result

ID: Coptis24_contig00014527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014527
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251...   174   1e-41
emb|CAN77337.1| hypothetical protein VITISV_003407 [Vitis vinifera]   172   2e-41
ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
gb|EEC73658.1| hypothetical protein OsI_08190 [Oryza sativa Indi...   166   3e-39
dbj|BAB11175.1| unnamed protein product [Arabidopsis thaliana]        164   9e-39

>ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251105 [Vitis vinifera]
          Length = 405

 Score =  174 bits (440), Expect = 1e-41
 Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 3/104 (2%)
 Frame = -1

Query: 555 PNVMVCPYDFPINEMEMRPYIPNILFGSDEPAKMKRFGSFWFKSG---KSDEVSDVPVLK 385
           PNVMVCPYDFP+ E +MR YIPN+LFGS +  KMKR GSFWFKSG   KS+  + VPVLK
Sbjct: 302 PNVMVCPYDFPLTEQDMRAYIPNVLFGSSKEVKMKRLGSFWFKSGSSNKSELDAHVPVLK 361

Query: 384 TLVLVATRSLCDEEILLNYRLSNSKRRPEWYTPVDEEEDRRRWS 253
           TLVLVATR+LCDEE+LLNYRLSNSKRRP WYTPVDEEEDRRRWS
Sbjct: 362 TLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRWS 405


>emb|CAN77337.1| hypothetical protein VITISV_003407 [Vitis vinifera]
          Length = 345

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/104 (78%), Positives = 89/104 (85%), Gaps = 3/104 (2%)
 Frame = -1

Query: 555 PNVMVCPYDFPINEMEMRPYIPNILFGSDEPAKMKRFGSFWFKSG---KSDEVSDVPVLK 385
           PNVMVCPYDFP+ E +MR YIPN+LFGS    KMKR GSFWFKSG   KS+  + VPVLK
Sbjct: 242 PNVMVCPYDFPLTEQDMRAYIPNVLFGSSXEVKMKRXGSFWFKSGSSNKSELDAHVPVLK 301

Query: 384 TLVLVATRSLCDEEILLNYRLSNSKRRPEWYTPVDEEEDRRRWS 253
           TLVLVATR+LCDEE+LLNYRLSNSKRRP WYTPVDEEEDRRRWS
Sbjct: 302 TLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRWS 345


>ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|222856616|gb|EEE94163.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  170 bits (431), Expect = 1e-40
 Identities = 75/101 (74%), Positives = 88/101 (87%)
 Frame = -1

Query: 555 PNVMVCPYDFPINEMEMRPYIPNILFGSDEPAKMKRFGSFWFKSGKSDEVSDVPVLKTLV 376
           PNVM+CPYDFP+ E +MR +IPN+ FG+ E   M+RFGSFWFKS   + VSDVPVLKTLV
Sbjct: 302 PNVMICPYDFPLTEKDMRTFIPNVSFGNHEEVNMRRFGSFWFKSSAKNSVSDVPVLKTLV 361

Query: 375 LVATRSLCDEEILLNYRLSNSKRRPEWYTPVDEEEDRRRWS 253
           LVATR+LC+EE+LLNYRLSN+KRRP WY+PVDEEEDRRRWS
Sbjct: 362 LVATRALCNEEVLLNYRLSNTKRRPAWYSPVDEEEDRRRWS 402


>gb|EEC73658.1| hypothetical protein OsI_08190 [Oryza sativa Indica Group]
          Length = 352

 Score =  166 bits (419), Expect = 3e-39
 Identities = 76/103 (73%), Positives = 89/103 (86%), Gaps = 2/103 (1%)
 Frame = -1

Query: 555 PNVMVCPYDFPINEMEMRPYIPNILFGSDE-PAKMKRFGSFWFKSGKS-DEVSDVPVLKT 382
           PNVM+CPYDFP+ E +MR YIPNI FG +E P  MKRFGSFWFKSG+S ++V + PVLKT
Sbjct: 250 PNVMICPYDFPLTEKDMRVYIPNITFGGEEEPVTMKRFGSFWFKSGRSGNQVGESPVLKT 309

Query: 381 LVLVATRSLCDEEILLNYRLSNSKRRPEWYTPVDEEEDRRRWS 253
           LVLV+TRS+CDEE+ LNYR SNSK+RPEWY PVDEEED+RRWS
Sbjct: 310 LVLVSTRSICDEELFLNYRYSNSKKRPEWYIPVDEEEDKRRWS 352


>dbj|BAB11175.1| unnamed protein product [Arabidopsis thaliana]
          Length = 437

 Score =  164 bits (415), Expect = 9e-39
 Identities = 75/101 (74%), Positives = 87/101 (86%)
 Frame = -1

Query: 555 PNVMVCPYDFPINEMEMRPYIPNILFGSDEPAKMKRFGSFWFKSGKSDEVSDVPVLKTLV 376
           PNVM+CPYDFP+   ++RPYIPNI FG     KMKRFGSFWFK+G  + + + PVLKTLV
Sbjct: 338 PNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGL-EAPVLKTLV 396

Query: 375 LVATRSLCDEEILLNYRLSNSKRRPEWYTPVDEEEDRRRWS 253
           LVATRSLC+EE+LLNYRLSNSKRRP+WYTPV+EEEDRRRWS
Sbjct: 397 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 437


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