BLASTX nr result

ID: Coptis24_contig00014520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014520
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synth...   132   4e-29
ref|XP_003548811.1| PREDICTED: dehydrodolichyl diphosphate synth...   131   1e-28
ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medic...   130   1e-28
ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medic...   129   4e-28
ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synth...   128   8e-28

>ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
           max]
          Length = 308

 Score =  132 bits (332), Expect = 4e-29
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -2

Query: 496 IKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCYLYSPSALWPEISLRHLVW 317
           IKL DIEKH YMA+APDPDIL+RTSGEARLSNFLLWQT+ C LY+P+ALWPEI LRHLVW
Sbjct: 230 IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVW 289

Query: 316 GILSYQRVQPYLEKKKKQ 263
            +L++QR   YLEKKKKQ
Sbjct: 290 AVLNFQRHHFYLEKKKKQ 307


>ref|XP_003548811.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
           max]
          Length = 360

 Score =  131 bits (329), Expect = 1e-28
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -2

Query: 496 IKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCYLYSPSALWPEISLRHLVW 317
           IKL DIEKH YMA+APDPDIL+RTSGEARLSNFLLWQT+ C LY+P+ALWPEI LRHLVW
Sbjct: 282 IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVW 341

Query: 316 GILSYQRVQPYLEKKKKQ 263
            +L++QR   YLEKK+KQ
Sbjct: 342 AVLNFQRHHFYLEKKRKQ 359


>ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355480990|gb|AES62193.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 426

 Score =  130 bits (328), Expect = 1e-28
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -2

Query: 496 IKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCYLYSPSALWPEISLRHLVW 317
           IKL DIEKH YMA+APDPDIL+RTSGEARLSNFLLWQT+ C LY+P  LWPEI LRHLVW
Sbjct: 348 IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVW 407

Query: 316 GILSYQRVQPYLEKKKKQ 263
            +L++QR   YLEKKKKQ
Sbjct: 408 AVLNFQRHHFYLEKKKKQ 425


>ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355523148|gb|AET03602.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 360

 Score =  129 bits (324), Expect = 4e-28
 Identities = 59/78 (75%), Positives = 66/78 (84%)
 Frame = -2

Query: 496 IKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCYLYSPSALWPEISLRHLVW 317
           IKL DIEKH YM +APDPDIL+RTSGEARLSNFLLWQT+ C LY+P  LWPEI LRHLVW
Sbjct: 282 IKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVW 341

Query: 316 GILSYQRVQPYLEKKKKQ 263
            +L++QR   YLEKKKKQ
Sbjct: 342 AVLNFQRHHFYLEKKKKQ 359


>ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
           [Vitis vinifera] gi|359480265|ref|XP_003632424.1|
           PREDICTED: dehydrodolichyl diphosphate synthase 6-like
           isoform 2 [Vitis vinifera]
          Length = 290

 Score =  128 bits (321), Expect = 8e-28
 Identities = 64/107 (59%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = -2

Query: 577 EIQELKSKEVNKDASRAIR-QMIDNECPIKLSDIEKHFYMAMAPDPDILVRTSGEARLSN 401
           EI+ELK+  V+   ++    +  + +  I L+DIEKH YMA+APDPDIL+RTSGE RLSN
Sbjct: 184 EIRELKASGVDCGLTKLEGYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSN 243

Query: 400 FLLWQTTCCYLYSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQL 260
           FLLWQ+  CYLYSPS LWPEI   HL+W +L++QR   YLEKKKKQL
Sbjct: 244 FLLWQSQYCYLYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 290


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