BLASTX nr result

ID: Coptis24_contig00014518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014518
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520975.1| trytophan synthase alpha subunit, putative [...   212   3e-53
gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thal...   209   2e-52
ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis th...   209   2e-52
gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consol...   208   3e-52
gb|ACJ02772.1| indole-3-glycerol phosphate lyase IGL1 [Lamium ga...   208   4e-52

>ref|XP_002520975.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223539812|gb|EEF41392.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 313

 Score =  212 bits (539), Expect = 3e-53
 Identities = 106/151 (70%), Positives = 125/151 (82%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   ISLRVSFSN----AKVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADG 168
           +SL  +FSN     KVAFIPY+ AGDPDLSTTAEALK+LDSCGSD+IELG+P+SDP+ADG
Sbjct: 50  LSLSETFSNLKKRGKVAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADG 109

Query: 169 PVIQAACTRALANGTSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAG 348
           PVIQAA TR+LA GT+ D+I SMLK+V+P++SCPI LFTYYN I KRGI  FM+ + D G
Sbjct: 110 PVIQAAATRSLARGTNFDAITSMLKEVVPQLSCPIALFTYYNPILKRGIEKFMSTVKDIG 169

Query: 349 VHGLVVPDVRLEETAYLRKEAAKNDIEMVQL 441
           VHGLVVPDV LEET  LR EAAK +IE+V L
Sbjct: 170 VHGLVVPDVPLEETELLRNEAAKKNIELVLL 200


>gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
          Length = 312

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/137 (73%), Positives = 118/137 (86%)
 Frame = +1

Query: 31  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 210
           KVAFIPY+ AGDPDLSTTAEALKVLD+CGSD+IELG+P+SDP+ADGPVIQAA TR+L  G
Sbjct: 63  KVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERG 122

Query: 211 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVRLEET 390
           T+LDSI+ ML KV+P+ISCPI+LFTYYN I KRG+G FM+++   GV GLVVPDV LEET
Sbjct: 123 TNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEET 182

Query: 391 AYLRKEAAKNDIEMVQL 441
             LRKEA  NDIE+V L
Sbjct: 183 EMLRKEALNNDIELVLL 199


>ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|75102736|sp|Q42529.1|TRPA2_ARATH RecName:
           Full=Tryptophan synthase alpha chain, chloroplastic;
           AltName: Full=Indole-3-glycerol-phosphate lyase,
           chloroplastic; AltName: Full=Protein
           TRYPTOPHAN-REQUIRING 3; Flags: Precursor
           gi|619753|gb|AAC49117.1| tryptophan synthase alpha chain
           [Arabidopsis thaliana] gi|7258367|emb|CAB77584.1|
           tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|108385367|gb|ABF85777.1| At3g54640 [Arabidopsis
           thaliana] gi|332645739|gb|AEE79260.1| tryptophan
           synthase alpha chain [Arabidopsis thaliana]
           gi|1585768|prf||2201482A Trp synthase:SUBUNIT=alpha
          Length = 312

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/137 (73%), Positives = 118/137 (86%)
 Frame = +1

Query: 31  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 210
           KVAFIPY+ AGDPDLSTTAEALKVLD+CGSD+IELG+P+SDP+ADGPVIQAA TR+L  G
Sbjct: 63  KVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERG 122

Query: 211 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVRLEET 390
           T+LDSI+ ML KV+P+ISCPI+LFTYYN I KRG+G FM+++   GV GLVVPDV LEET
Sbjct: 123 TNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEET 182

Query: 391 AYLRKEAAKNDIEMVQL 441
             LRKEA  NDIE+V L
Sbjct: 183 EMLRKEALNNDIELVLL 199


>gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consolida orientalis]
          Length = 319

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/137 (71%), Positives = 119/137 (86%)
 Frame = +1

Query: 31  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 210
           +VAFIP++ AGDPDLSTTAEALKVLDSCGSD+IELG+P+SDP+ADGPVIQAA TRALA G
Sbjct: 70  RVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARG 129

Query: 211 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVRLEET 390
           T+ D+I++ML+ V+P++SCP+ LF+YYN I KRGIG FM  + D GVHGLVVPDV LEET
Sbjct: 130 TNFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEET 189

Query: 391 AYLRKEAAKNDIEMVQL 441
           A LR+EA KN IE++ L
Sbjct: 190 AMLREEALKNQIELILL 206


>gb|ACJ02772.1| indole-3-glycerol phosphate lyase IGL1 [Lamium galeobdolon]
          Length = 313

 Score =  208 bits (529), Expect = 4e-52
 Identities = 99/137 (72%), Positives = 116/137 (84%)
 Frame = +1

Query: 31  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 210
           KVAFIPY+ AGDPDLSTTAE LKVLDSCGSD+IELG+P+SDP+ADGPVIQAA +RALA G
Sbjct: 64  KVAFIPYITAGDPDLSTTAEVLKVLDSCGSDIIELGVPYSDPLADGPVIQAAASRALARG 123

Query: 211 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVRLEET 390
           T+ D I++MLK+V+P++SCP+ LFTYYN I KRG G FMA L D G+HGLVVPDV LEET
Sbjct: 124 TNFDKIIAMLKEVVPQLSCPVALFTYYNPILKRGAGKFMATLQDTGIHGLVVPDVPLEET 183

Query: 391 AYLRKEAAKNDIEMVQL 441
             LRKEA   +IE+V L
Sbjct: 184 EILRKEAISKNIELVLL 200


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