BLASTX nr result

ID: Coptis24_contig00014517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014517
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|22352896...   185   3e-45
gb|ABK93694.1| unknown [Populus trichocarpa]                          184   6e-45
ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vin...   181   5e-44
emb|CAN72839.1| hypothetical protein VITISV_008789 [Vitis vinifera]   181   5e-44

>ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|222841502|gb|EEE79049.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = -1

Query: 531 TSAIASCAASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALN 352
           TSAIAS A SYWFC+APAVGASGAIFG+VGS AVFV+RHR + GGG EDLQ +A+VI LN
Sbjct: 200 TSAIASSAMSYWFCRAPAVGASGAIFGLVGSLAVFVIRHRRMIGGGKEDLQNIAKVIFLN 259

Query: 351 MAIGILSKGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 175
           M IG+L+KGIDNWGH+GGLLGG ATSW +GPAW+Y  +S DGR ++ D+API YLT+ K
Sbjct: 260 MMIGLLTKGIDNWGHLGGLLGGVATSWFVGPAWQYGPQSHDGRRVFVDKAPIRYLTNRK 318


>ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|223528967|gb|EEF30959.1| KOM,
           putative [Ricinus communis]
          Length = 340

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/120 (70%), Positives = 100/120 (83%)
 Frame = -1

Query: 534 FTSAIASCAASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIAL 355
           FTSAIAS A SYWFCKAPAVGASGAIFG+VGS AVFV+RHR +  GG E+LQ +A+VI L
Sbjct: 217 FTSAIASSATSYWFCKAPAVGASGAIFGLVGSLAVFVIRHRGMIRGGKEELQHIAQVILL 276

Query: 354 NMAIGILSKGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 175
           NM IGILS+GIDNWGH+GGLLGG ATSW +GPAW+Y++ + DGR I+ DR PI YL + K
Sbjct: 277 NMVIGILSRGIDNWGHLGGLLGGVATSWFVGPAWKYEALANDGRRIFVDRPPIKYLANIK 336


>gb|ABK93694.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  184 bits (468), Expect = 6e-45
 Identities = 84/119 (70%), Positives = 101/119 (84%)
 Frame = -1

Query: 531 TSAIASCAASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALN 352
           TSAIAS A SYWFC+APAVGASGAIFG+VGS AVFV+RHR + GG  EDLQ +A+VI LN
Sbjct: 200 TSAIASSAMSYWFCRAPAVGASGAIFGLVGSLAVFVIRHRRMIGGAKEDLQNIAKVIFLN 259

Query: 351 MAIGILSKGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 175
           M IG+L+KGIDNWGH+GGLLGG ATSW +GPAW+Y ++S DGR ++ D+API YLT+ K
Sbjct: 260 MMIGLLTKGIDNWGHLGGLLGGVATSWFVGPAWQYGTQSHDGRRVFVDKAPIRYLTNRK 318


>ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vinifera]
           gi|298204568|emb|CBI23843.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  181 bits (460), Expect = 5e-44
 Identities = 85/121 (70%), Positives = 98/121 (80%)
 Frame = -1

Query: 534 FTSAIASCAASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIAL 355
           FTSAIAS A SYW CK PAVGASGAIFG+VGS AVF++RHR L G   E LQ +ARVI L
Sbjct: 208 FTSAIASSAMSYWLCKGPAVGASGAIFGLVGSVAVFMMRHRGLVGDSKESLQHIARVIVL 267

Query: 354 NMAIGILSKGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 175
           NM IG LSKGIDNWGH+GGLLGG  TSWLLGPAW+Y+S S DGR ++ADRAPI +L + +
Sbjct: 268 NMVIGCLSKGIDNWGHLGGLLGGLVTSWLLGPAWKYESLSNDGRRVFADRAPIFHLVNRR 327

Query: 174 K 172
           +
Sbjct: 328 R 328


>emb|CAN72839.1| hypothetical protein VITISV_008789 [Vitis vinifera]
          Length = 246

 Score =  181 bits (460), Expect = 5e-44
 Identities = 85/121 (70%), Positives = 98/121 (80%)
 Frame = -1

Query: 534 FTSAIASCAASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIAL 355
           FTSAIAS A SYW CK PAVGASGAIFG+VGS AVF++RHR L G   E LQ +ARVI L
Sbjct: 124 FTSAIASSAMSYWLCKGPAVGASGAIFGLVGSVAVFMMRHRGLVGDSKESLQHIARVIVL 183

Query: 354 NMAIGILSKGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 175
           NM IG LSKGIDNWGH+GGLLGG  TSWLLGPAW+Y+S S DGR ++ADRAPI +L + +
Sbjct: 184 NMVIGCLSKGIDNWGHLGGLLGGLVTSWLLGPAWKYESLSNDGRRVFADRAPIFHLVNRR 243

Query: 174 K 172
           +
Sbjct: 244 R 244


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