BLASTX nr result

ID: Coptis24_contig00014511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014511
         (1592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...   362   2e-97
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...   354   4e-95
ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...   353   7e-95
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]        338   3e-90
emb|CBI27664.3| unnamed protein product [Vitis vinifera]              312   1e-82

>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
            vinifera]
          Length = 477

 Score =  362 bits (929), Expect = 2e-97
 Identities = 194/386 (50%), Positives = 245/386 (63%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1403 NFTFETVERFGQXXXXXXXXXKMEDSGTSPTAMEASVISGEPVIGLKLGKRTYFEDVCAG 1224
            NFTFE  + F Q         + E +G+SP  +EAS+ SGEP+IGLKLGKRTYFEDV AG
Sbjct: 95   NFTFEAFQDFSQDFNKKRDLERAEPTGSSPN-LEASIGSGEPLIGLKLGKRTYFEDVSAG 153

Query: 1223 XXXXXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGCNFDLSSSKDYHRRHRVCETHS 1044
                                    S  +    RCQVEGCN DLS++KDYHR+HRVCE+H+
Sbjct: 154  ANAKGSVFSVIPISSDTTAKRSRLSCQNAHVSRCQVEGCNLDLSTAKDYHRKHRVCESHT 213

Query: 1043 KCPRVVVAGLESRFCQQCSRFHDMMEFDENKRSCRRRLSLY-ARHRKSQPDGIQFNSDRL 867
            KCP+V+V GLE RFCQQCSRFH + EFDE KRSCRRRLS + AR RK QP+GIQ NS RL
Sbjct: 214  KCPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQPEGIQSNSARL 273

Query: 866  SSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIKPEAKESVMRSVKVERINGKLNL 687
            SS FY  +Q MSL+ + VP+ HTRP  NP+WE TC    + K  ++R      I+ +L+L
Sbjct: 274  SS-FYGGKQQMSLVLSSVPIVHTRPAVNPSWEGTCSKFTQTK-GLVRPGNTGGIDRQLHL 331

Query: 686  SNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLNVAPDFRRALSLLSNNP 507
              + L + I  +  DS RLL  KG+  EVL+QGL   + +SNL+ + D RRALSLLS N 
Sbjct: 332  PGSELQNGISTLCHDSSRLLHSKGAIAEVLNQGLGDSMISSNLDTSQDLRRALSLLSTNS 391

Query: 506  WRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWSLGSAEYWQTEQQPVDTQVHSMASQI 327
            W S   +P   D  M+ N TSM    MHAV QG    ++E+W+TE    D++VH + SQ 
Sbjct: 392  WGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQGMLHSTSEHWRTELPSTDSRVHILPSQG 451

Query: 326  SSGNHFQEFQLFKAPFESGYYSSQMN 249
                HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 452  DGNTHFQEFKLFKAPYESGFSSGQLN 477


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
            gi|223545956|gb|EEF47459.1| LIGULELESS1 protein, putative
            [Ricinus communis]
          Length = 483

 Score =  354 bits (908), Expect = 4e-95
 Identities = 196/390 (50%), Positives = 247/390 (63%), Gaps = 5/390 (1%)
 Frame = -1

Query: 1403 NFTFETVERFGQXXXXXXXXXKMEDSGTSPTAMEASVISGEPVIGLKLGKRTYFEDVCAG 1224
            NFTFE  E               + +GTS T +EASV SGEP++GLKLGKRTYFEDVCAG
Sbjct: 97   NFTFEASE--ATEDFNNKKAFTAKPTGTSST-IEASVGSGEPLLGLKLGKRTYFEDVCAG 153

Query: 1223 XXXXXXXXXXXXXXXXXXXXXXXXSY-HSTQTPRCQVEGCNFDLSSSKDYHRRHRVCETH 1047
                                    S   ++ TPRCQVEGCN DLSS+KDYHR+HRVCE H
Sbjct: 154  SNIKSSSFSSAIPGSSISPPKRSKSSSQASSTPRCQVEGCNLDLSSAKDYHRKHRVCENH 213

Query: 1046 SKCPRVVVAGLESRFCQQCSRFHDMMEFDENKRSCRRRLSLY-ARHRKSQPDGIQFNSDR 870
            SKCP+V+VAGLE RFCQQCSRFH + EFDE KRSCRRRLS + AR RK QP+ IQ NS R
Sbjct: 214  SKCPKVIVAGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQPESIQMNSAR 273

Query: 869  LSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-PEAKESVMRSVKVERINGKL 693
            LSSS YD R  MSL++NR PL H R  AN  WE T   K    KE V++  K+  I+G+L
Sbjct: 274  LSSSSYDERPHMSLVWNRAPLVHARANANLAWEGTSSSKFTITKEYVLKPAKIGGIDGQL 333

Query: 692  NLSNNNLPSAIPLMHRDSDRLLSFKGST--TEVLSQGLEAPVTASNLNVAPDFRRALSLL 519
            +L  N L ++IPL   +   LL  K      EVL+Q LE  + +SN++   D  RALSLL
Sbjct: 334  HLPANELTTSIPLHPHNCKSLLPSKAKVPIAEVLNQDLEESIISSNVDATQDLHRALSLL 393

Query: 518  SNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWSLGSAEYWQTEQQPVDTQVHSM 339
            S N W S  P+  S ++    +HT M    +HAVPQG  L S++YW+ EQ   +++VH++
Sbjct: 394  STNSWGSCEPKSFSHERPAQLSHTGMPQSVLHAVPQGLPLTSSDYWRAEQHITNSRVHTL 453

Query: 338  ASQISSGNHFQEFQLFKAPFESGYYSSQMN 249
             SQ  S ++FQEFQL +AP+++ +YSSQ+N
Sbjct: 454  TSQNDSSSYFQEFQLLRAPYDNDFYSSQLN 483


>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10 [Vitis
            vinifera]
          Length = 506

 Score =  353 bits (906), Expect = 7e-95
 Identities = 189/371 (50%), Positives = 236/371 (63%), Gaps = 2/371 (0%)
 Frame = -1

Query: 1394 FETVERFGQXXXXXXXXXKMEDSGTSPTAMEASVISGEPVIGLKLGKRTYFEDVCAGXXX 1215
            F  VE F +         ++  SG  PT +  S  SGE +IGLKLGKRTYFEDVCA    
Sbjct: 92   FRNVEDFHKDFSENKELIRVGSSGNCPT-VGTSDGSGEAMIGLKLGKRTYFEDVCAASTA 150

Query: 1214 XXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGCNFDLSSSKDYHRRHRVCETHSKCP 1035
                                 SY S+QTPRCQVEGCN DL S+KDYHRRHR+CE HSK P
Sbjct: 151  KTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCNLDLKSAKDYHRRHRICENHSKSP 210

Query: 1034 RVVVAGLESRFCQQCSRFHDMMEFDENKRSCRRRLSLY-ARHRKSQPDGIQFNSDRLSSS 858
            +V+VAGLE RFCQQCSRFH++ EFD+ KRSCRRRL+ + AR R+  P+ IQF+S RL SS
Sbjct: 211  KVIVAGLERRFCQQCSRFHELTEFDDKKRSCRRRLNDHNARRRRPHPESIQFSSGRLPSS 270

Query: 857  FYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIKP-EAKESVMRSVKVERINGKLNLSN 681
             YD RQ ++L  NR+P+    PVA P W+  C  K  +   S++R VK   I+ +L+L  
Sbjct: 271  LYDGRQQINLACNRLPI----PVATPMWQNPCSFKDTQTGGSLIRPVKAVGIDKQLHLPT 326

Query: 680  NNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLNVAPDFRRALSLLSNNPWR 501
            + +P AI ++H +S+R+LSF GST  VL+QGLEA   ASN NVAPDFRRALSLLS N W 
Sbjct: 327  DEMPDAISMLHGNSERMLSFDGSTPRVLNQGLEASAIASNSNVAPDFRRALSLLSTNSWG 386

Query: 500  SGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWSLGSAEYWQTEQQPVDTQVHSMASQISS 321
              +P PTSLDQLM+ N TSMA P MHA P  W+L S+E    +Q P +T+ HS+    + 
Sbjct: 387  LNDPGPTSLDQLMHVNQTSMAQPTMHAEPHNWALASSENMHVQQTPSETRGHSLDLHNNE 446

Query: 320  GNHFQEFQLFK 288
               F+ F   K
Sbjct: 447  AACFKSFNYLK 457


>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
          Length = 500

 Score =  338 bits (866), Expect = 3e-90
 Identities = 180/349 (51%), Positives = 225/349 (64%), Gaps = 2/349 (0%)
 Frame = -1

Query: 1328 SGTSPTAMEASVISGEPVIGLKLGKRTYFEDVCAGXXXXXXXXXXXXXXXXXXXXXXXXS 1149
            SG  PT +  S  SGE +IGLKLGKR YFEDVCA                         S
Sbjct: 108  SGNCPT-VGTSDGSGEAMIGLKLGKRPYFEDVCAASTAKTTTSSVNPASSVSATKRFRTS 166

Query: 1148 YHSTQTPRCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMM 969
            Y S+QTPRCQVEGCN DL S+KDYHRRHR+CE HSK P+V+VAGLE RFCQQCSRFH++ 
Sbjct: 167  YQSSQTPRCQVEGCNLDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELT 226

Query: 968  EFDENKRSCRRRLSLY-ARHRKSQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRP 792
            EFD+ KRS RRRL+ + AR R+  P+ IQF+S RL SS YD RQ ++L  NR+P+    P
Sbjct: 227  EFDDKKRSRRRRLNDHNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----P 282

Query: 791  VANPTWEATCCIKP-EAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKG 615
            VA P W+  C  K  +   S++R VK   I+ +L+L  + +P AI ++H +S+R+LSF G
Sbjct: 283  VATPMWQNPCSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDG 342

Query: 614  STTEVLSQGLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAH 435
            ST  VL+QGLEA   ASN NVAPDFRRALSLLS N W   +P PTSLDQLM+ N +SMA 
Sbjct: 343  STPRVLNQGLEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQ 402

Query: 434  PAMHAVPQGWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFK 288
            P MH  P  W+L S+E    +Q P + + HS+    +    F+ F   K
Sbjct: 403  PTMHVEPHNWALASSENMHVQQTPSEIRGHSLDLHNNEAACFKSFNYLK 451


>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  312 bits (800), Expect = 1e-82
 Identities = 159/294 (54%), Positives = 202/294 (68%), Gaps = 1/294 (0%)
 Frame = -1

Query: 1127 RCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDENKR 948
            RCQVEGCN DLS++KDYHR+HRVCE+H+KCP+V+V GLE RFCQQCSRFH + EFDE KR
Sbjct: 127  RCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKR 186

Query: 947  SCRRRLSLY-ARHRKSQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWE 771
            SCRRRLS + AR RK QP+GIQ NS RLSS FY  +Q MSL+ + VP+ HTRP  NP+WE
Sbjct: 187  SCRRRLSDHNARRRKPQPEGIQSNSARLSS-FYGGKQQMSLVLSSVPIVHTRPAVNPSWE 245

Query: 770  ATCCIKPEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQ 591
             TC    + K  ++R      I+ +L+L  + L + I  +  DS RLL  KG+  EVL+Q
Sbjct: 246  GTCSKFTQTK-GLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQ 304

Query: 590  GLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQ 411
            GL   + +SNL+ + D RRALSLLS N W S   +P   D  M+ N TSM    MHAV Q
Sbjct: 305  GLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQ 364

Query: 410  GWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 249
            G    ++E+W+TE    D++VH + SQ     HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 365  GMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 418


Top