BLASTX nr result

ID: Coptis24_contig00014501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014501
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455091.1| hypothetical protein SORBIDRAFT_03g004200 [S...   133   2e-29
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...   132   3e-29
ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [S...   129   3e-28
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...   125   4e-27
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S...   124   1e-26

>ref|XP_002455091.1| hypothetical protein SORBIDRAFT_03g004200 [Sorghum bicolor]
           gi|241927066|gb|EES00211.1| hypothetical protein
           SORBIDRAFT_03g004200 [Sorghum bicolor]
          Length = 124

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/110 (59%), Positives = 82/110 (74%)
 Frame = -2

Query: 466 LIKGTHAGEPAFLHRIPMKPSQNLNLGFDFTRKEFPIRWGFALTIHKSQGQTIPHVGIYL 287
           ++ G HAG+  F+ RIPM PS +++L F   RK+FPIR  FA+TI+K+QGQTIPHVGIYL
Sbjct: 14  IVGGQHAGKRVFIPRIPMSPSDDISLAFKLKRKQFPIRLSFAMTINKAQGQTIPHVGIYL 73

Query: 286 LDNIFDHGQLYVALSWGVSRETTKILIKKGVLNGYPGTYTKNIVYKSVLR 137
            + +F HGQLYVALS GVSR+TT++L K        G YTKNIVYK VL+
Sbjct: 74  PEPVFSHGQLYVALSRGVSRQTTRVLAKPKKELDPSGKYTKNIVYKDVLQ 123


>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/110 (59%), Positives = 82/110 (74%)
 Frame = -2

Query: 466 LIKGTHAGEPAFLHRIPMKPSQNLNLGFDFTRKEFPIRWGFALTIHKSQGQTIPHVGIYL 287
           ++ G HAG+  F+ RIPM PS +++L F   RK+FPIR  FA+TI+K+QGQTIPHVGIYL
Sbjct: 416 IVGGQHAGKRVFIPRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKTQGQTIPHVGIYL 475

Query: 286 LDNIFDHGQLYVALSWGVSRETTKILIKKGVLNGYPGTYTKNIVYKSVLR 137
            + +F HGQLYVALS GVSR+TT++L K        G YTKNIVYK VL+
Sbjct: 476 PEPVFSHGQLYVALSRGVSRQTTRVLAKPKKELDPSGKYTKNIVYKDVLQ 525


>ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [Sorghum bicolor]
           gi|241914965|gb|EER88109.1| hypothetical protein
           SORBIDRAFT_10g007990 [Sorghum bicolor]
          Length = 143

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/109 (59%), Positives = 81/109 (74%)
 Frame = -2

Query: 466 LIKGTHAGEPAFLHRIPMKPSQNLNLGFDFTRKEFPIRWGFALTIHKSQGQTIPHVGIYL 287
           ++ G HAG+  FL RIPM PS +++L F   RK+FPIR  FA+TI+K+QGQTIP+VGIYL
Sbjct: 33  IVGGQHAGKRVFLPRIPMSPSDDISLPFKMKRKQFPIRLSFAMTINKAQGQTIPNVGIYL 92

Query: 286 LDNIFDHGQLYVALSWGVSRETTKILIKKGVLNGYPGTYTKNIVYKSVL 140
            +++F HGQLYVALS GVSR+TT+IL K        G  TKNIVYK VL
Sbjct: 93  PEHVFSHGQLYVALSRGVSRQTTRILSKPNKELDSTGKSTKNIVYKDVL 141


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/109 (58%), Positives = 79/109 (72%)
 Frame = -2

Query: 466  LIKGTHAGEPAFLHRIPMKPSQNLNLGFDFTRKEFPIRWGFALTIHKSQGQTIPHVGIYL 287
            ++ G HAG   FL RIPM PS +++L F   RK+FPIR  FA+TI+K+QGQTIP+VGIYL
Sbjct: 1270 IVAGHHAGRRVFLPRIPMSPSDDISLPFKMKRKQFPIRLSFAMTINKAQGQTIPNVGIYL 1329

Query: 286  LDNIFDHGQLYVALSWGVSRETTKILIKKGVLNGYPGTYTKNIVYKSVL 140
             + +F HGQLYVALS GVSR+TT+IL K        G  TKNIV+K VL
Sbjct: 1330 PEPVFSHGQLYVALSRGVSRQTTRILSKPNKELDSTGRSTKNIVWKDVL 1378


>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
           gi|241944914|gb|EES18059.1| hypothetical protein
           SORBIDRAFT_09g017230 [Sorghum bicolor]
          Length = 512

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/109 (55%), Positives = 78/109 (71%)
 Frame = -2

Query: 466 LIKGTHAGEPAFLHRIPMKPSQNLNLGFDFTRKEFPIRWGFALTIHKSQGQTIPHVGIYL 287
           ++ G H G+  F+ RIPM PS +++L F   RK+FPIR  FA+TI+K+QGQTIP+VGIYL
Sbjct: 402 IVGGQHQGKRVFITRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKAQGQTIPNVGIYL 461

Query: 286 LDNIFDHGQLYVALSWGVSRETTKILIKKGVLNGYPGTYTKNIVYKSVL 140
            + +F HGQLYVALS GVSR TT++L K        G  TKNIVYK +L
Sbjct: 462 PEPVFSHGQLYVALSRGVSRSTTRVLAKPNQELDGTGNTTKNIVYKDIL 510


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