BLASTX nr result

ID: Coptis24_contig00014480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014480
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-31
ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-30
ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254...   122   2e-25
ref|XP_002322276.1| predicted protein [Populus trichocarpa] gi|2...   121   4e-25
ref|XP_002873598.1| hypothetical protein ARALYDRAFT_488125 [Arab...   120   9e-25

>ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|222846582|gb|EEE84129.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  140 bits (353), Expect = 8e-31
 Identities = 95/247 (38%), Positives = 128/247 (51%), Gaps = 13/247 (5%)
 Frame = +3

Query: 210 DKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRP---NTSTVKKHKSPIFECGCFECY 365
           D+EVLAY+I+RS+K T   NP   +++  KK+ K+P   N S    H +PIF+C CF+CY
Sbjct: 50  DREVLAYMITRSLKTTTTNNPSPSLQDSKKKSSKKPQNNNNSQRSNHIAPIFDCDCFDCY 109

Query: 366 TSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGKKRDKKFQQPKIVVNSVVD- 542
            SYWFRWDSS NRELIHQVIEAFE+HLT+ E S  K TRGK+RDK  +  ++   SV+D 
Sbjct: 110 ISYWFRWDSSPNRELIHQVIEAFEEHLTSDEMS-RKHTRGKRRDKAGR--RVGEKSVLDV 166

Query: 543 ----EIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKLPEPEIVAGNXXXXXXXXXXX 710
               E++P +    T    ++    V   V  + GC +    PE VA             
Sbjct: 167 PGQPEMIPVLETSNTTSHESSSSCSVADVVNVNVGCPDNGLSPEKVAEREEMEECVKLYD 226

Query: 711 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGGNNHKGLVRKVMLDVIGLFNSRML 890
                                                ++HKGL RKV+ DV+GL NSR+ 
Sbjct: 227 EVPEEVVVAETAAAAHGVAVC----------------SHHKGLARKVLPDVLGLLNSRLW 270

Query: 891 SVWSTNV 911
           ++WS NV
Sbjct: 271 NLWSPNV 277


>ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|222841206|gb|EEE78753.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  137 bits (344), Expect = 9e-30
 Identities = 96/250 (38%), Positives = 129/250 (51%), Gaps = 16/250 (6%)
 Frame = +3

Query: 210 DKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRP---NTSTVKKHKSPIFECGCFECY 365
           D+EVLAY+I+RS+K T   NP SF+++  KK+ K+P   N S    H++PIF+C CF+CY
Sbjct: 61  DREVLAYMITRSLKTTITNNPSSFLQDSKKKSSKKPQNNNNSQTSNHRAPIFDCDCFDCY 120

Query: 366 TSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGKKRDK---KFQQPKIVVNSV 536
            SYWFRWDSS NRELIHQVIE+FE+HLT+ E S  K  RGK+RDK   +  +  ++    
Sbjct: 121 RSYWFRWDSSPNRELIHQVIESFEEHLTSGEMS-RKSNRGKRRDKTGHRAGEKPVLDVPG 179

Query: 537 VDEIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKLP-----EPEIVAGNXXXXXXXX 701
             EI+P VLE      T+A E+     + E +  EE +        E+VA          
Sbjct: 180 QPEILP-VLETSN---TSAHESPPTGSITEREEMEEAVKLYDEVSEEVVAAETEVEAAAH 235

Query: 702 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGGNNHKGLVRKVMLDVIGLFNS 881
                                                   + HKGL RKV+ DV+GL NS
Sbjct: 236 GVAVC-----------------------------------SRHKGLARKVLPDVLGLLNS 260

Query: 882 RMLSVWSTNV 911
           R+ S+ S NV
Sbjct: 261 RLWSLLSPNV 270


>ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254092 [Vitis vinifera]
          Length = 267

 Score =  122 bits (306), Expect = 2e-25
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 13/162 (8%)
 Frame = +3

Query: 210 DKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRPNTSTV--------KKHKSPIFECG 350
           D+EVLAY+I+RS+K T   NP SF ++  KK+ K+P  +            HK P+F+CG
Sbjct: 52  DREVLAYMITRSIKTTTTTNPCSFSQDSKKKSKKQPPAAAGGGGGGGGGSAHKPPVFDCG 111

Query: 351 CFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGKKRDKKFQQPKIVVN 530
           CFECYT YWFRWDSS NRELIHQ IEAFEDHL++ E+      RGKK+++  ++     +
Sbjct: 112 CFECYTCYWFRWDSSPNRELIHQAIEAFEDHLSSGEKPKRIGGRGKKKERVGRRIADKPD 171

Query: 531 SVVDEIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKLPE 656
            +  ++   V E E   V    +  V       DGCEE   E
Sbjct: 172 DISCQLEMPVAEEEAPEVPNTDDASVAPAPTARDGCEEAKAE 213


>ref|XP_002322276.1| predicted protein [Populus trichocarpa] gi|222869272|gb|EEF06403.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  121 bits (304), Expect = 4e-25
 Identities = 85/251 (33%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
 Frame = +3

Query: 210 DKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRPNTSTVKK----HKSPIFECGCFEC 362
           D+EVLAYLI+RS+ +T   NP S + +  KK CK  +T++        K P F+CGCF+C
Sbjct: 48  DREVLAYLIARSIFVTTAPNPSSLITQHPKKKCKTKSTASKNDKYCDQKVPSFQCGCFDC 107

Query: 363 YTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGKKRDKKFQQPKIVVNSVVD 542
           YT +W+RWDSS NR+ IHQVIE FE+HL     S  K +RGKK+ K         ++V+ 
Sbjct: 108 YTRFWYRWDSSPNRDFIHQVIEPFEEHLVQKIESSKKHSRGKKKGKVLMMGHFESDNVLF 167

Query: 543 EIVPQVLELETFVVTTAPENEVFFPVLESDGC--EEKLP--------EPEIVAGNXXXXX 692
            I P++   +T       +  +    +E +G   EE++         E E+V G+     
Sbjct: 168 NI-PEIAVPKTVCEVMIMQENLESGEIEGNGVVFEEEMVGQEVTRNLEMEVVTGHPSGY- 225

Query: 693 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGGNNHKGLVRKVMLDVIGL 872
                                                      NNHKGL  KV+LDV+GL
Sbjct: 226 -----------------------------------------NDNNHKGLAMKVLLDVMGL 244

Query: 873 FNSRMLS-VWS 902
            NSR+ S +WS
Sbjct: 245 LNSRLWSNLWS 255


>ref|XP_002873598.1| hypothetical protein ARALYDRAFT_488125 [Arabidopsis lyrata subsp.
           lyrata] gi|297319435|gb|EFH49857.1| hypothetical protein
           ARALYDRAFT_488125 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  120 bits (301), Expect = 9e-25
 Identities = 87/248 (35%), Positives = 118/248 (47%), Gaps = 15/248 (6%)
 Frame = +3

Query: 210 DKEVLAYLISRSMKITNPF-SFMEEKKNCKRPNTSTVKKHKSPIFECGCFECYTSYWFRW 386
           ++EVLAYLI+R   I++   S  +  K  K+ N  + K HK P+F+C CF+CYT+YWFRW
Sbjct: 54  EREVLAYLITRGTTISDRGNSSSKNNKTKKKSNNKSAKNHKPPVFDCECFDCYTNYWFRW 113

Query: 387 DSSVNRELIHQVIEAFED-HLTNTER---SPSKRTRGKKRDK---------KFQQPKIVV 527
           DSS NRELIH++IEAFE+ HLT+ E+   S +K  RGKK++K            +P I V
Sbjct: 114 DSSPNRELIHEIIEAFENHHLTSGEQNSASRNKSKRGKKKEKPGRRVTDSDSNNKPGIRV 173

Query: 528 NSVVDEIVPQVLELETFVVTTAPENEVFFPVLESDG-CEEKLPEPEIVAGNXXXXXXXXX 704
           +   D+    V+E  T   T +  + V  P   S+    E  PE EIV            
Sbjct: 174 SDDDDKDSKPVVEPMT-ETTVSESSHVSSPDRLSEAEVAEGEPEDEIVV----------- 221

Query: 705 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGGNNHKGLVRKVMLDVIGLFNSR 884
                                                    HKGL RKV+ DV+GLFNS 
Sbjct: 222 -----------------EEEEEEEEESTVVVFAAAASSVTGHKGLARKVLPDVLGLFNSN 264

Query: 885 MLSVWSTN 908
              +W+ N
Sbjct: 265 FWRLWNPN 272


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