BLASTX nr result

ID: Coptis24_contig00014456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014456
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867685.1| hypothetical protein ARALYDRAFT_914207 [Arab...   217   2e-54
ref|NP_194120.1| uncharacterized protein [Arabidopsis thaliana] ...   216   6e-54
emb|CAN73381.1| hypothetical protein VITISV_003162 [Vitis vinifera]   215   9e-54
gb|AFK46315.1| unknown [Lotus japonicus]                              210   4e-52
ref|XP_002509967.1| conserved hypothetical protein [Ricinus comm...   209   5e-52

>ref|XP_002867685.1| hypothetical protein ARALYDRAFT_914207 [Arabidopsis lyrata subsp.
           lyrata] gi|297313521|gb|EFH43944.1| hypothetical protein
           ARALYDRAFT_914207 [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score =  217 bits (553), Expect = 2e-54
 Identities = 116/249 (46%), Positives = 153/249 (61%), Gaps = 8/249 (3%)
 Frame = -2

Query: 795 ASFNLPSPQSPIMQKCKSSSSFLGETNHLK-------PSPRIHKMIPSTFSLKPMSKFNL 637
           +S  +P+ ++PI +     S FLG+T+          P P+    +   + +K M KFNL
Sbjct: 4   SSITIPTMRTPIHR-----SKFLGQTHQFSTANQSIFPPPKQQSKV---YQVKAMGKFNL 55

Query: 636 FEIMGGRGLLNGEQGVLRELEKNTTAPDPQTSTVXXXXXXXXXXXXXSDFQVPENAFDKE 457
           +E+MGGRGL NGE+G+ +EL++N      +TS                 F+VPE+ FDKE
Sbjct: 56  WEVMGGRGLCNGEKGIEKELKRNIE-DGQETSKAENNETEKESDDSNLSFKVPEDGFDKE 114

Query: 456 LLGLTGGFPGGEKGLDAFLEKNPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-GMI 280
           ++GLTGGFPGGEKGL  F+EKNPPP                                GMI
Sbjct: 115 MMGLTGGFPGGEKGLQTFIEKNPPPPPTPPPAKRGTDASAVVTDKKPKAPELPLLMPGMI 174

Query: 279 AIVKNERNPFYMYCGIIQRITDGKAGVLFEGGNWDKLITFRLDELERREKGPPMVNPKSA 100
           AIVKN+ +P++MYCGI+QRITDGKAGVLFEGGNWD+LITFRL+ELERREKGPP  NPKS 
Sbjct: 175 AIVKNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSC 234

Query: 99  VLESLVKEL 73
           +LE L++++
Sbjct: 235 ILEPLIEQM 243


>ref|NP_194120.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4972093|emb|CAB43889.1| putative protein [Arabidopsis
           thaliana] gi|7269238|emb|CAB81307.1| putative protein
           [Arabidopsis thaliana] gi|21592640|gb|AAM64589.1|
           unknown [Arabidopsis thaliana]
           gi|22135940|gb|AAM91552.1| putative protein [Arabidopsis
           thaliana] gi|23197588|gb|AAN15321.1| putative protein
           [Arabidopsis thaliana] gi|332659420|gb|AEE84820.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 250

 Score =  216 bits (550), Expect = 6e-54
 Identities = 115/246 (46%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
 Frame = -2

Query: 795 ASFNLPSPQSPIMQKCKSSSSFLGETNHLKPSPRI----HKMIPSTFSLKPMSKFNLFEI 628
           +S  +P+ ++PI +     S FLG+T+      R      K     + +K M KFNL+E+
Sbjct: 4   SSITIPTIRTPIHR-----SKFLGQTHQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEV 58

Query: 627 MGGRGLLNGEQGVLRELEKNTTAPDPQTSTVXXXXXXXXXXXXXSDFQVPENAFDKELLG 448
           MGGRGL NGE+G+ +EL++N    + +TS                 F+VPE+ F+KE++G
Sbjct: 59  MGGRGLCNGEKGIEKELQRNIE-DEQETSKAENNETERESDDSNLSFKVPEDGFEKEMMG 117

Query: 447 LTGGFPGGEKGLDAFLEKNPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-GMIAIV 271
           LTGGFPGGEKGL  F+EKNPPP                                GMIAIV
Sbjct: 118 LTGGFPGGEKGLKTFIEKNPPPPPPPPPAKQGSDASAVATDKKPKAPKLPLLMPGMIAIV 177

Query: 270 KNERNPFYMYCGIIQRITDGKAGVLFEGGNWDKLITFRLDELERREKGPPMVNPKSAVLE 91
           KN+ +P++MYCGI+QRITDGKAGVLFEGGNWD+LITFRL+ELERREKGPP  NPKS +LE
Sbjct: 178 KNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSCILE 237

Query: 90  SLVKEL 73
            L++++
Sbjct: 238 PLIEQM 243


>emb|CAN73381.1| hypothetical protein VITISV_003162 [Vitis vinifera]
          Length = 231

 Score =  215 bits (548), Expect = 9e-54
 Identities = 123/242 (50%), Positives = 150/242 (61%), Gaps = 3/242 (1%)
 Frame = -2

Query: 792 SFNLPSPQSPIMQKCKSSSSFLGE---TNHLKPSPRIHKMIPSTFSLKPMSKFNLFEIMG 622
           SF +PS Q P+  K    S FLG+    N+++ +       P    +K  +KF+LF IMG
Sbjct: 4   SFTVPSLQRPLPHK----SHFLGQGHFPNNIQKASLSRTRTP--LPVKASAKFDLFGIMG 57

Query: 621 GRGLLNGEQGVLRELEKNTTAPDPQTSTVXXXXXXXXXXXXXSDFQVPENAFDKELLGLT 442
           GRGL NGE+G+ +EL++N   P P   +V                 VPE+ FDKELLGLT
Sbjct: 58  GRGLCNGEEGLQQELKRNIE-PAPSPDSVKDEEKPALAAVD----DVPEDGFDKELLGLT 112

Query: 441 GGFPGGEKGLDAFLEKNPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGMIAIVKNE 262
           GGFPGGEKGL  FLEKNPPP                               GMIAIVKN 
Sbjct: 113 GGFPGGEKGLKQFLEKNPPPEKTSGNIIENARLRKPKPPELPLLMP-----GMIAIVKNP 167

Query: 261 RNPFYMYCGIIQRITDGKAGVLFEGGNWDKLITFRLDELERREKGPPMVNPKSAVLESLV 82
            NPFYMYCGI+QRITDGKAGVLFEGGNWD+LITFRL+EL+RR+KGPPM NPKSA+LE+L+
Sbjct: 168 NNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELQRRDKGPPMKNPKSAILETLL 227

Query: 81  KE 76
           ++
Sbjct: 228 EQ 229


>gb|AFK46315.1| unknown [Lotus japonicus]
          Length = 234

 Score =  210 bits (534), Expect = 4e-52
 Identities = 116/223 (52%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
 Frame = -2

Query: 738 SSFLGETN--HLKPSPRIHKMIPSTFSLKPMSKFNLFEIMGGRGLLNGEQGVLRELEKNT 565
           S FLG+ +  HL P  +IH + PS   ++P +KFNL +IMGGRGL NGE+G+ +EL++  
Sbjct: 17  SQFLGQDSLTHLNPRSKIH-IKPSHKFVQPCAKFNLVQIMGGRGLCNGEEGLEQELKRQV 75

Query: 564 TAPDPQTSTVXXXXXXXXXXXXXSDFQVPENAFDKELLGLTGGFPGGEKGLDAFLEKNPP 385
            A +                   +  QV E+ F+KEL+GLTGGFPGGEKGL  F+E+NPP
Sbjct: 76  GADEKPLPPAASDKEQEDSGGSTT--QVAEDGFEKELMGLTGGFPGGEKGLRKFIEENPP 133

Query: 384 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGMIAIVKNERNPFYMYCGIIQRITDGKA 205
           P                               GMIAIVKN  NPFYMYCGI+QRITDGKA
Sbjct: 134 PKPGAGSKSLNLTSSVKPKAPELPMLLP----GMIAIVKNPNNPFYMYCGIVQRITDGKA 189

Query: 204 GVLFEGGNWDKLITFRLDELERREKGPPMVNPKSAVLESLVKE 76
            +LFEGGNWDKLITFRLDELERREKGPPM NPKS VLE L+++
Sbjct: 190 RILFEGGNWDKLITFRLDELERREKGPPMKNPKSCVLEPLLEK 232


>ref|XP_002509967.1| conserved hypothetical protein [Ricinus communis]
           gi|223549866|gb|EEF51354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  209 bits (533), Expect = 5e-52
 Identities = 114/221 (51%), Positives = 138/221 (62%), Gaps = 3/221 (1%)
 Frame = -2

Query: 738 SSFLGETNHLKPSP-RIHKMIP--STFSLKPMSKFNLFEIMGGRGLLNGEQGVLRELEKN 568
           S FLG+ N L   P R +  IP  S F LKP +KF+LFE +GGRGL NGEQG+ +EL+++
Sbjct: 14  SHFLGQNNSLLNRPNRPYSSIPKESRFKLKPCAKFDLFEFLGGRGLCNGEQGIQQELKRD 73

Query: 567 TTAPDPQTSTVXXXXXXXXXXXXXSDFQVPENAFDKELLGLTGGFPGGEKGLDAFLEKNP 388
             A    +S                +  VPENAF+KEL+GLTGGFPGGEKGL  F+E+NP
Sbjct: 74  A-AEASSSSVAAQEENSGAAAQASENENVPENAFEKELMGLTGGFPGGEKGLKKFIEENP 132

Query: 387 PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGMIAIVKNERNPFYMYCGIIQRITDGK 208
           PP                               GMIAIV N  +P+YMYCGI+QRITDGK
Sbjct: 133 PPKKQSAIDSVRILEIATSKKPKAPELPLLMP-GMIAIVSNSNSPYYMYCGIVQRITDGK 191

Query: 207 AGVLFEGGNWDKLITFRLDELERREKGPPMVNPKSAVLESL 85
           A VLFEGGNWD+LITFRL+EL+RREKGPP  NPKS ++E L
Sbjct: 192 AAVLFEGGNWDRLITFRLEELQRREKGPPGKNPKSVIIEGL 232


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