BLASTX nr result
ID: Coptis24_contig00014421
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014421 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase... 96 5e-27 ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus ... 97 1e-25 ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis tha... 100 4e-25 ref|XP_002302455.1| predicted protein [Populus trichocarpa] gi|2... 97 5e-25 ref|XP_003523584.1| PREDICTED: plastidial lipoyltransferase 2-li... 96 1e-24 >ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase family-like [Vitis vinifera] gi|296086674|emb|CBI32309.3| unnamed protein product [Vitis vinifera] Length = 290 Score = 95.9 bits (237), Expect(2) = 5e-27 Identities = 46/54 (85%), Positives = 51/54 (94%) Frame = +2 Query: 2 LEEVVIRVLSSTFCIKATRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVT 163 LEEVVIRVLS+TF IKA+RLEG TGVWVG+QKLAAIGIRVS+W+ YHGLALNVT Sbjct: 161 LEEVVIRVLSTTFSIKASRLEGFTGVWVGDQKLAAIGIRVSQWIAYHGLALNVT 214 Score = 50.1 bits (118), Expect(2) = 5e-27 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +3 Query: 156 MSPDLSPFQRIVPCGIRNREVGSIMRLL*ASSSPNGIG-KDTILAEACHLLDITYK 320 ++ DL+PFQ IVPCGIRNR++GSI +L S N G D + L+DIT+K Sbjct: 213 VTTDLTPFQLIVPCGIRNRKIGSIKGILGEFGSSNRCGASDINYIDDFQLIDITHK 268 >ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus communis] gi|223530737|gb|EEF32607.1| lipoate-protein ligase B, putative [Ricinus communis] Length = 303 Score = 96.7 bits (239), Expect(2) = 1e-25 Identities = 45/54 (83%), Positives = 52/54 (96%) Frame = +2 Query: 2 LEEVVIRVLSSTFCIKATRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVT 163 LEEVVIRVLSSTF I+A+R+EGLTGVW G+QKLAAIG++VSRW+TYHGLALNVT Sbjct: 155 LEEVVIRVLSSTFSIQASRIEGLTGVWAGDQKLAAIGVKVSRWITYHGLALNVT 208 Score = 44.7 bits (104), Expect(2) = 1e-25 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +3 Query: 156 MSPDLSPFQRIVPCGIRNREVGSIMRLL*ASSSPNGIGK-DTILAEACHLLDITYK 320 ++ DL PF IVPCGIRNR+VGSI LL S NG D + L+DIT K Sbjct: 207 VTTDLEPFNWIVPCGIRNRKVGSIKGLLQKVQSCNGRHTIDMPQLDDLKLIDITCK 262 >ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis thaliana] gi|75164691|sp|Q948J9.1|LIP2P_ARATH RecName: Full=Plastidial lipoyltransferase 2; AltName: Full=Lipoate-protein ligase 2p; AltName: Full=Lipoyl-[acyl-carrier-protein]-protein-N- lipoyltransferase 2p gi|15887052|dbj|BAB69449.1| lipoyltransferase [Arabidopsis thaliana] gi|62320326|dbj|BAD94675.1| putative protein [Arabidopsis thaliana] gi|90186250|gb|ABD91501.1| At4g31050 [Arabidopsis thaliana] gi|332660451|gb|AEE85851.1| Plastidial lipoyltransferase 2 [Arabidopsis thaliana] Length = 278 Score = 100 bits (248), Expect(2) = 4e-25 Identities = 47/54 (87%), Positives = 53/54 (98%) Frame = +2 Query: 2 LEEVVIRVLSSTFCIKATRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVT 163 LEE+VIRVLSSTF IKA+RL+GLTGVWVGNQK+AAIGIRVS+W+TYHGLALNVT Sbjct: 155 LEEIVIRVLSSTFSIKASRLDGLTGVWVGNQKVAAIGIRVSKWITYHGLALNVT 208 Score = 39.7 bits (91), Expect(2) = 4e-25 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +3 Query: 156 MSPDLSPFQRIVPCGIRNREVGSIMRLL*ASSSPNGIGKDTILAEACH 299 ++ DL+PF IVPCGIR+R+VG+I LL +G+ D L + H Sbjct: 207 VTTDLTPFNWIVPCGIRDRKVGNIKGLL--EDGEHGMVDDLRLIDIVH 252 >ref|XP_002302455.1| predicted protein [Populus trichocarpa] gi|222844181|gb|EEE81728.1| predicted protein [Populus trichocarpa] Length = 295 Score = 96.7 bits (239), Expect(2) = 5e-25 Identities = 46/54 (85%), Positives = 52/54 (96%) Frame = +2 Query: 2 LEEVVIRVLSSTFCIKATRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVT 163 LEEVVIRVLSSTF IKA+R+EGLTGVWVG+QKLAAIGI+VS+W+ YHGLALNVT Sbjct: 164 LEEVVIRVLSSTFSIKASRIEGLTGVWVGDQKLAAIGIKVSQWIAYHGLALNVT 217 Score = 42.7 bits (99), Expect(2) = 5e-25 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +3 Query: 156 MSPDLSPFQRIVPCGIRNREVGSIMRLL*ASSS 254 ++ DL+PF IVPCGIRNR+VGSI LL S S Sbjct: 216 VTTDLAPFNLIVPCGIRNRKVGSIKGLLEESCS 248 >ref|XP_003523584.1| PREDICTED: plastidial lipoyltransferase 2-like [Glycine max] Length = 293 Score = 95.9 bits (237), Expect(2) = 1e-24 Identities = 45/54 (83%), Positives = 51/54 (94%) Frame = +2 Query: 2 LEEVVIRVLSSTFCIKATRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVT 163 LEEVVIR LSSTF I+A+R+EGLTGVWVGNQKLAA+GIRV+ W+TYHGLALNVT Sbjct: 147 LEEVVIRALSSTFSIQASRVEGLTGVWVGNQKLAALGIRVAHWITYHGLALNVT 200 Score = 42.0 bits (97), Expect(2) = 1e-24 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +3 Query: 156 MSPDLSPFQRIVPCGIRNREVGSIMRLL*ASSSPNGIGKDTIL-AEACHLLDITYK 320 ++ DLSPF+ ++PCGIR+R+VGSI LL + S G + + L+ ITY+ Sbjct: 199 VTTDLSPFKWVIPCGIRDRQVGSIKGLLKEAQSCIAHGTSVLHDLDDTSLIHITYR 254