BLASTX nr result

ID: Coptis24_contig00014413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014413
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596176.1| 1-aminocyclopropane-1-carboxylate oxidase-li...   191   8e-47
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   189   3e-46
emb|CBI21960.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   189   3e-46
emb|CAN82828.1| hypothetical protein VITISV_043897 [Vitis vinifera]   189   3e-46

>ref|XP_003596176.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago
           truncatula] gi|355485224|gb|AES66427.1|
           1-aminocyclopropane-1-carboxylate oxidase-like protein
           [Medicago truncatula]
          Length = 367

 Score =  191 bits (486), Expect = 8e-47
 Identities = 99/188 (52%), Positives = 127/188 (67%)
 Frame = -3

Query: 565 DRVEELKAFDDTKTGVKGLVDSGILKVPKIFIRPPNELDYKLDSNLSQFQIPIIDLKGIE 386
           DR++ELKAFD+TK GVKGLVD GILK+P +F  PP++     +S  ++  IP+ID   I 
Sbjct: 14  DRLQELKAFDETKAGVKGLVDQGILKIPALFHHPPDKYGKSTNSTNTEHIIPVIDFLNIG 73

Query: 385 GDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSVMEEMIQGVFRFNEQNDEVKKELYSRD 206
            D  TRQEI+ +I  ASE WGFF VVNHG+P +V+E+M  GV RF EQ+ EVKKE+Y+RD
Sbjct: 74  KDPNTRQEIITKIKEASETWGFFQVVNHGIPINVLEDMKDGVIRFFEQDTEVKKEMYTRD 133

Query: 205 RKKRVRFFSNFDLYTSKAANWRDALYISMXXXXXXXXXXXPIVCRQTTIAYANHVTKLGD 26
           + + + + SNFDLY+S A NWRD L + M           P+VCR   + Y  HV KLG 
Sbjct: 134 QTRPLVYNSNFDLYSSPALNWRDTLALKM-APNAPKPEDLPVVCRDIFLEYGEHVMKLGI 192

Query: 25  TLFELLSE 2
            LFELLSE
Sbjct: 193 VLFELLSE 200


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  189 bits (481), Expect = 3e-46
 Identities = 98/190 (51%), Positives = 131/190 (68%), Gaps = 1/190 (0%)
 Frame = -3

Query: 568 YDRVEELKAFDDTKTGVKGLVDSGILKVPKIFIRPPNELDYKLDSNLSQFQIPIIDLKGI 389
           YDR  ELKAFD++KTGVKGL D+G+ KVP++FI+PP+ L     +  +QF  P++DL+G+
Sbjct: 14  YDRASELKAFDESKTGVKGLADAGVSKVPRMFIQPPDNLR----TYTTQFNFPVVDLQGM 69

Query: 388 EGDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSVMEEMIQGVFRFNEQNDEVKKELYSR 209
           + D   R +IVD +  ASE WGFF VVNHG+P SV+EEM++GV RF+EQ+ EVKK+ Y+R
Sbjct: 70  DNDPIRRNKIVDMVRDASETWGFFNVVNHGIPVSVLEEMMEGVRRFHEQDTEVKKQFYTR 129

Query: 208 D-RKKRVRFFSNFDLYTSKAANWRDALYISMXXXXXXXXXXXPIVCRQTTIAYANHVTKL 32
           D  +K+V + SNFDLYT+ AANWRD  Y  M           P  CR   + Y + V +L
Sbjct: 130 DASRKKVMYNSNFDLYTAPAANWRDTFYCLM-APHPPNPEELPASCRDILMEYKDQVMRL 188

Query: 31  GDTLFELLSE 2
           G  LFEL+SE
Sbjct: 189 GFKLFELISE 198



 Score =  128 bits (321), Expect = 1e-27
 Identities = 70/143 (48%), Positives = 89/143 (62%)
 Frame = -3

Query: 430 LSQFQIPIIDLKGIEGDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSVMEEMIQGVFRF 251
           L++F  P+IDL+ +  D   R+EIVD +  ASE WGFF VVNHG+  +V+EEM  GV RF
Sbjct: 365 LTKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRF 424

Query: 250 NEQNDEVKKELYSRDRKKRVRFFSNFDLYTSKAANWRDALYISMXXXXXXXXXXXPIVCR 71
            EQ+ EVKK+ YSRD +++V + SNFDLY + AANWRD  Y  M           P   R
Sbjct: 425 YEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYFLMAPQPPDPQELPP-AFR 483

Query: 70  QTTIAYANHVTKLGDTLFELLSE 2
              I Y + V KLG  L EL+SE
Sbjct: 484 DILIEYKDEVMKLGFKLLELISE 506


>emb|CBI21960.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  189 bits (481), Expect = 3e-46
 Identities = 96/191 (50%), Positives = 129/191 (67%)
 Frame = -3

Query: 574 PVYDRVEELKAFDDTKTGVKGLVDSGILKVPKIFIRPPNELDYKLDSNLSQFQIPIIDLK 395
           P YDR  ELKAFDD+K+GVKGL+D G+ K+P +FI P    D K +S +SQF++P+IDL 
Sbjct: 8   PEYDRKSELKAFDDSKSGVKGLLDGGMTKIPLMFIHPRYNPDAKSESAVSQFRVPLIDLD 67

Query: 394 GIEGDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSVMEEMIQGVFRFNEQNDEVKKELY 215
           G++ +   R +I+D++  A E WGFF VVNHG+P SV+EEMI G+  F+EQ+ ++KKE Y
Sbjct: 68  GVKDNATVRAKIIDQVRGACENWGFFQVVNHGIPASVLEEMIDGIRGFHEQDTQMKKEFY 127

Query: 214 SRDRKKRVRFFSNFDLYTSKAANWRDALYISMXXXXXXXXXXXPIVCRQTTIAYANHVTK 35
           +RD K +V F SNFDL+ + AA W+D+L   M           P VCR     Y+  V +
Sbjct: 128 TRDFKDKVSFVSNFDLFEATAATWKDSLSWPM-VPNPPDPTEFPAVCRDIVTEYSKQVKR 186

Query: 34  LGDTLFELLSE 2
           LG TLFELLSE
Sbjct: 187 LGYTLFELLSE 197



 Score =  157 bits (397), Expect = 2e-36
 Identities = 79/174 (45%), Positives = 114/174 (65%)
 Frame = -3

Query: 523 GVKGLVDSGILKVPKIFIRPPNELDYKLDSNLSQFQIPIIDLKGIEGDKKTRQEIVDRIL 344
           G +GLVD G+ K+P +FI P    D K  S +SQF++P+IDL G+  +   R +I+D++ 
Sbjct: 350 GKRGLVDGGLTKIPLMFIHPHYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVR 409

Query: 343 CASEKWGFFLVVNHGLPTSVMEEMIQGVFRFNEQNDEVKKELYSRDRKKRVRFFSNFDLY 164
            A E WGF  VVNHG+P SV+EEM+ G+  F+EQ+ ++KKE Y+RD K++V F SNFDL+
Sbjct: 410 EACENWGFLQVVNHGIPASVLEEMLDGIRGFHEQDTQMKKEFYTRDFKEKVSFVSNFDLF 469

Query: 163 TSKAANWRDALYISMXXXXXXXXXXXPIVCRQTTIAYANHVTKLGDTLFELLSE 2
            + AA W+D+L  ++           P VCR   + Y+  V +LG TLFE+LSE
Sbjct: 470 QATAATWKDSLSWAV-APNPPHPKELPAVCRDIVMEYSKQVKRLGYTLFEVLSE 522


>ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 353

 Score =  189 bits (481), Expect = 3e-46
 Identities = 96/191 (50%), Positives = 129/191 (67%)
 Frame = -3

Query: 574 PVYDRVEELKAFDDTKTGVKGLVDSGILKVPKIFIRPPNELDYKLDSNLSQFQIPIIDLK 395
           P YDR  ELKAFDD+K+GVKGL+D G+ K+P +FI P    D K +S +SQF++P+IDL 
Sbjct: 8   PEYDRKSELKAFDDSKSGVKGLLDGGMTKIPLMFIHPRYNPDAKSESAVSQFRVPLIDLD 67

Query: 394 GIEGDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSVMEEMIQGVFRFNEQNDEVKKELY 215
           G++ +   R +I+D++  A E WGFF VVNHG+P SV+EEMI G+  F+EQ+ ++KKE Y
Sbjct: 68  GVKDNATVRAKIIDQVRGACENWGFFQVVNHGIPASVLEEMIDGIRGFHEQDTQMKKEFY 127

Query: 214 SRDRKKRVRFFSNFDLYTSKAANWRDALYISMXXXXXXXXXXXPIVCRQTTIAYANHVTK 35
           +RD K +V F SNFDL+ + AA W+D+L   M           P VCR     Y+  V +
Sbjct: 128 TRDFKDKVSFVSNFDLFEATAATWKDSLSWPM-VPNPPDPTEFPAVCRDIVTEYSKQVKR 186

Query: 34  LGDTLFELLSE 2
           LG TLFELLSE
Sbjct: 187 LGYTLFELLSE 197


>emb|CAN82828.1| hypothetical protein VITISV_043897 [Vitis vinifera]
          Length = 740

 Score =  189 bits (481), Expect = 3e-46
 Identities = 104/217 (47%), Positives = 139/217 (64%), Gaps = 1/217 (0%)
 Frame = -3

Query: 649  YPRNHKRKKKMAISSDPLLSSPIVEPVYDRVEELKAFDDTKTGVKGLVDSGILKVPKIFI 470
            Y R  + K+KM      +L+S  VE  +DR  ELKAFDD+K+GVKGLVD+GI K+P +FI
Sbjct: 374  YLRGKRSKRKM------ILTSSGVEVEHDRKRELKAFDDSKSGVKGLVDAGITKIPPMFI 427

Query: 469  RPPNELDYKLDSNLSQFQIPIIDLKGIEGDKKTRQEIVDRILCASEKWGFFLVVNHGLPT 290
             P   L+ K  S +SQF++P++DL GI      R +I+D++  A E WGFF  VNHG+P 
Sbjct: 428  HPQYNLNAKSGSAVSQFRVPLVDLDGINDSATLRAKIIDQVREACENWGFFQAVNHGIPA 487

Query: 289  SVMEEMIQGVFRFNEQNDEVKKE-LYSRDRKKRVRFFSNFDLYTSKAANWRDALYISMXX 113
            SV+EEMI G+  F+EQ+ +VKKE  Y RD K++V +FSNFDL  +  A W+D L  +M  
Sbjct: 488  SVLEEMIDGIRGFHEQDTQVKKEYFYKRDFKEKVSYFSNFDLCQATVATWKDCLSWAM-A 546

Query: 112  XXXXXXXXXPIVCRQTTIAYANHVTKLGDTLFELLSE 2
                     P VCR   + Y+  V +LG TLFELLSE
Sbjct: 547  PSPPDPTELPAVCRDIVMEYSKQVKRLGCTLFELLSE 583



 Score =  162 bits (409), Expect = 7e-38
 Identities = 90/214 (42%), Positives = 128/214 (59%)
 Frame = -3

Query: 643 RNHKRKKKMAISSDPLLSSPIVEPVYDRVEELKAFDDTKTGVKGLVDSGILKVPKIFIRP 464
           +  K K K       +L S  VE  YDR  EL+AFD +K+GVKGLVD G+ K+P +FI P
Sbjct: 32  KRRKGKGKRKSRRKMILPSSGVESEYDRKSELEAFDASKSGVKGLVDGGLTKIPLMFIHP 91

Query: 463 PNELDYKLDSNLSQFQIPIIDLKGIEGDKKTRQEIVDRILCASEKWGFFLVVNHGLPTSV 284
               D K  S +SQF++P+IDL G+  +   R +I+D++  A E WGF  VVNHG+P SV
Sbjct: 92  HYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVREACENWGFLQVVNHGIPASV 151

Query: 283 MEEMIQGVFRFNEQNDEVKKELYSRDRKKRVRFFSNFDLYTSKAANWRDALYISMXXXXX 104
           +EEM+ G+  F+EQ+ ++KKE Y+RD K++           + AA W+D+L  ++     
Sbjct: 152 LEEMLDGIRGFHEQDTQMKKEFYTRDFKEK-----------ATAATWKDSLSWAV-APNP 199

Query: 103 XXXXXXPIVCRQTTIAYANHVTKLGDTLFELLSE 2
                 P VCR   + Y+  V +LG TLFE+LSE
Sbjct: 200 PHPKELPAVCRDIVMEYSKQVKRLGYTLFEVLSE 233


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