BLASTX nr result

ID: Coptis24_contig00014411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014411
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314242.1| predicted protein [Populus trichocarpa] gi|2...   236   8e-60
ref|XP_002532585.1| conserved hypothetical protein [Ricinus comm...   232   1e-58
emb|CBI15641.3| unnamed protein product [Vitis vinifera]              226   6e-57
ref|XP_002279778.1| PREDICTED: uncharacterized protein LOC100245...   226   6e-57
emb|CAN81787.1| hypothetical protein VITISV_026006 [Vitis vinifera]   226   6e-57

>ref|XP_002314242.1| predicted protein [Populus trichocarpa] gi|222850650|gb|EEE88197.1|
           predicted protein [Populus trichocarpa]
          Length = 838

 Score =  236 bits (601), Expect = 8e-60
 Identities = 141/323 (43%), Positives = 199/323 (61%), Gaps = 12/323 (3%)
 Frame = -2

Query: 934 VLPKPITGFSSNLLTSLDEHFKT-QDDLYKASSVSTHMKIECGDLDRNLTTLQKTLSSLI 758
           VLP+  +  SS  +  LD++  T QD L +A  + + +  E  + D +L  L++ L+ L 
Sbjct: 19  VLPRR-SELSSQNIQFLDQNLVTHQDLLVRAPLLLSDLTKERSNFDAHLLNLRRKLTELA 77

Query: 757 AQWASRSNSAKTVLHQLNIKFRDFELKPSSDGNEKVGLRKCKRSLGEELSILAKDLRRIG 578
             W SRS SAK+ L ++N    +  L+ S  G   +G  K  + L EE+  LAK ++RI 
Sbjct: 78  VSWISRSFSAKSSLSKVNFMLENLSLQTSQYG---IGSWKVGKVLVEEIPKLAKQVQRIE 134

Query: 577 MVRSYVETTLSLEVLVGDLEDAVLCV-----------TNQKALNGTDYRWKNEKMILACR 431
            +  Y++T L LE LVGDLED V CV             Q +L   D+  K E+++ A +
Sbjct: 135 NILKYIDTALQLEALVGDLEDGVFCVGGLHARNLFSEKRQTSLKSMDFGPKLERILEAIK 194

Query: 430 AMNDIEDVLTSVLKNTSKWCMLLKSVDGRVDKPLAVLRLQALADHRIILNSIGWPPPLLT 251
            MN+IE+VL ++ K  ++W  LL+SVD RVDK L V+R Q LADHR +L+S+GWPP LLT
Sbjct: 195 TMNNIEEVLVNIKKFQAQWHRLLESVDARVDKILVVVRPQVLADHRALLSSLGWPPKLLT 254

Query: 250 SELEGENGSELPNPLVLMQGGTKERYSQSFLALCSLQHLHTRREERKNFDVLGHKRDHRY 71
            +++  + + L  PLVLMQG   + YSQ+FLALCSLQHL  RRE+R++  +   +R+   
Sbjct: 255 PKIDSGDIAGLSYPLVLMQGDKSKCYSQTFLALCSLQHLQRRREDRQHNII--EQRECGI 312

Query: 70  GLWTIDELVSPIALRTEHHFSKW 2
           GLW IDELVSPIA R E+HFSKW
Sbjct: 313 GLWAIDELVSPIASRMEYHFSKW 335


>ref|XP_002532585.1| conserved hypothetical protein [Ricinus communis]
           gi|223527694|gb|EEF29802.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 829

 Score =  232 bits (591), Expect = 1e-58
 Identities = 143/336 (42%), Positives = 191/336 (56%), Gaps = 25/336 (7%)
 Frame = -2

Query: 934 VLPKPITGFSSNLLTSLDEHFKTQDDLY-KASSVSTHMKIECGDLDRNLTTLQKTLSSLI 758
           VLP+ I   SS     LD+H  T++DL  +A  + T +K    DL+ N   LQ+    L 
Sbjct: 21  VLPRQIE-LSSLQKEFLDQHLSTREDLVARAPLLLTDLKQSYADLESNFINLQRNHIKLT 79

Query: 757 AQWASRSNSAKTVLHQLNIKFRDFELKPSSDGNEKVGLRKCKRS-LGEELSILAKDLRRI 581
             W S S  AK+++  LN    +     S  G+       C R  L EE+  L K L+RI
Sbjct: 80  VSWISHSFGAKSLIANLNYMLENLSFHTSQYGS-------CPRKILSEEMPQLVKGLKRI 132

Query: 580 GMVRSYVETTLSLEVLVGDLEDAVLCVTNQKA-----------------------LNGTD 470
             + SYV+  L LE LVGDLEDA+  + +  A                           D
Sbjct: 133 ECIHSYVDIALQLEALVGDLEDAIYTIGDSHAKFSAKLLTSMISTVKSAFPLPQYFGTQD 192

Query: 469 YRWKNEKMILACRAMNDIEDVLTSVLKNTSKWCMLLKSVDGRVDKPLAVLRLQALADHRI 290
           +  K E ++ A + MN+IED+L +V+K   KW  LL+SVD RVDK LAV+R Q LADHR 
Sbjct: 193 FGLKQEILLRAIKVMNNIEDILVTVVKVHPKWSHLLESVDVRVDKSLAVVRPQILADHRA 252

Query: 289 ILNSIGWPPPLLTSELEGENGSELPNPLVLMQGGTKERYSQSFLALCSLQHLHTRREERK 110
           +L S+GWPP LLTS+++    +  PNPLVLM+G  ++ YSQSFL LC+LQHL TRRE+R+
Sbjct: 253 LLASLGWPPKLLTSKVDTGEITSFPNPLVLMEGDKRKCYSQSFLGLCALQHLQTRREDRQ 312

Query: 109 NFDVLGHKRDHRYGLWTIDELVSPIALRTEHHFSKW 2
           + ++ G K +    LW IDELVSPIA R E+HFSKW
Sbjct: 313 H-NIFGQK-ECTMRLWAIDELVSPIASRMEYHFSKW 346


>emb|CBI15641.3| unnamed protein product [Vitis vinifera]
          Length = 1659

 Score =  226 bits (576), Expect = 6e-57
 Identities = 134/312 (42%), Positives = 191/312 (61%)
 Frame = -2

Query: 937 LVLPKPITGFSSNLLTSLDEHFKTQDDLYKASSVSTHMKIECGDLDRNLTTLQKTLSSLI 758
           L LP P +  S +LL  LD  F T +DL  A +++  +   C DLD +L+   + L +LI
Sbjct: 4   LALPNP-SELSPHLLGFLDHRFGTLEDLLTAPNLAVELSKICSDLDADLSAFHRNLKTLI 62

Query: 757 AQWASRSNSAKTVLHQLNIKFRDFELKPSSDGNEKVGLRKCKRSLGEELSILAKDLRRIG 578
           A W  RS +AKT + +LN + ++  +  S   N+ V        L ++L  LA++L R+ 
Sbjct: 63  ASWTRRSIAAKTAVLRLNYRLQNLGVLASQ--NDVV--------LSQDLPRLARELLRVE 112

Query: 577 MVRSYVETTLSLEVLVGDLEDAVLCVTNQKALNGTDYRWKNEKMILACRAMNDIEDVLTS 398
            VR Y ET L LE L+GDLED +      + + GT    K E++I A + + DI+ VL +
Sbjct: 113 AVRGYAETALRLEALIGDLEDVIFT----ENVAGTV---KQERVIGAVKIVADIDSVLAN 165

Query: 397 VLKNTSKWCMLLKSVDGRVDKPLAVLRLQALADHRIILNSIGWPPPLLTSELEGENGSEL 218
           V +   +W  LL SVD RV+K L++LR + +A HR +L+S+GWPP L  S++E    S +
Sbjct: 166 VAEFQPRWRRLLNSVDDRVEKALSILRTRVVASHRTLLSSLGWPPKLSVSKIENGGVSAI 225

Query: 217 PNPLVLMQGGTKERYSQSFLALCSLQHLHTRREERKNFDVLGHKRDHRYGLWTIDELVSP 38
           PNPL+LM+G  +E YSQSF+ALC+LQH+   RE+R++ D LG K      LW IDELVSP
Sbjct: 226 PNPLMLMRGEKRESYSQSFVALCALQHV---REKRRHSDDLGFKAK----LWAIDELVSP 278

Query: 37  IALRTEHHFSKW 2
           IA R E+HFSKW
Sbjct: 279 IASRIEYHFSKW 290


>ref|XP_002279778.1| PREDICTED: uncharacterized protein LOC100245683 [Vitis vinifera]
          Length = 792

 Score =  226 bits (576), Expect = 6e-57
 Identities = 134/312 (42%), Positives = 191/312 (61%)
 Frame = -2

Query: 937 LVLPKPITGFSSNLLTSLDEHFKTQDDLYKASSVSTHMKIECGDLDRNLTTLQKTLSSLI 758
           L LP P +  S +LL  LD  F T +DL  A +++  +   C DLD +L+   + L +LI
Sbjct: 4   LALPNP-SELSPHLLGFLDHRFGTLEDLLTAPNLAVELSKICSDLDADLSAFHRNLKTLI 62

Query: 757 AQWASRSNSAKTVLHQLNIKFRDFELKPSSDGNEKVGLRKCKRSLGEELSILAKDLRRIG 578
           A W  RS +AKT + +LN + ++  +  S   N+ V        L ++L  LA++L R+ 
Sbjct: 63  ASWTRRSIAAKTAVLRLNYRLQNLGVLASQ--NDVV--------LSQDLPRLARELLRVE 112

Query: 577 MVRSYVETTLSLEVLVGDLEDAVLCVTNQKALNGTDYRWKNEKMILACRAMNDIEDVLTS 398
            VR Y ET L LE L+GDLED +      + + GT    K E++I A + + DI+ VL +
Sbjct: 113 AVRGYAETALRLEALIGDLEDVIFT----ENVAGTV---KQERVIGAVKIVADIDSVLAN 165

Query: 397 VLKNTSKWCMLLKSVDGRVDKPLAVLRLQALADHRIILNSIGWPPPLLTSELEGENGSEL 218
           V +   +W  LL SVD RV+K L++LR + +A HR +L+S+GWPP L  S++E    S +
Sbjct: 166 VAEFQPRWRRLLNSVDDRVEKALSILRTRVVASHRTLLSSLGWPPKLSVSKIENGGVSAI 225

Query: 217 PNPLVLMQGGTKERYSQSFLALCSLQHLHTRREERKNFDVLGHKRDHRYGLWTIDELVSP 38
           PNPL+LM+G  +E YSQSF+ALC+LQH+   RE+R++ D LG K      LW IDELVSP
Sbjct: 226 PNPLMLMRGEKRESYSQSFVALCALQHV---REKRRHSDDLGFKAK----LWAIDELVSP 278

Query: 37  IALRTEHHFSKW 2
           IA R E+HFSKW
Sbjct: 279 IASRIEYHFSKW 290


>emb|CAN81787.1| hypothetical protein VITISV_026006 [Vitis vinifera]
          Length = 1616

 Score =  226 bits (576), Expect = 6e-57
 Identities = 134/312 (42%), Positives = 191/312 (61%)
 Frame = -2

Query: 937 LVLPKPITGFSSNLLTSLDEHFKTQDDLYKASSVSTHMKIECGDLDRNLTTLQKTLSSLI 758
           L LP P +  S +LL  LD  F T +DL  A +++  +   C DLD +L+   + L +LI
Sbjct: 4   LALPNP-SELSPHLLGFLDHRFGTLEDLLTAPNLAVELSKICSDLDADLSAFHRNLKTLI 62

Query: 757 AQWASRSNSAKTVLHQLNIKFRDFELKPSSDGNEKVGLRKCKRSLGEELSILAKDLRRIG 578
           A W  RS +AKT + +LN + ++  +  S   N+ V        L ++L  LA++L R+ 
Sbjct: 63  ASWTRRSIAAKTAVLRLNYRLQNLGVLASQ--NDVV--------LSQDLPRLARELLRVE 112

Query: 577 MVRSYVETTLSLEVLVGDLEDAVLCVTNQKALNGTDYRWKNEKMILACRAMNDIEDVLTS 398
            VR Y ET L LE L+GDLED +      + + GT    K E++I A + + DI+ VL +
Sbjct: 113 AVRGYAETALRLEALIGDLEDVIFT----ENVAGTV---KQERVIGAVKIVADIDSVLAN 165

Query: 397 VLKNTSKWCMLLKSVDGRVDKPLAVLRLQALADHRIILNSIGWPPPLLTSELEGENGSEL 218
           V +   +W  LL SVD RV+K L++LR + +A HR +L+S+GWPP L  S++E    S +
Sbjct: 166 VAEFQPRWRRLLNSVDDRVEKALSILRTRVVASHRTLLSSLGWPPKLSVSKIENGGVSAI 225

Query: 217 PNPLVLMQGGTKERYSQSFLALCSLQHLHTRREERKNFDVLGHKRDHRYGLWTIDELVSP 38
           PNPL+LM+G  +E YSQSF+ALC+LQH+   RE+R++ D LG K      LW IDELVSP
Sbjct: 226 PNPLMLMRGEKRESYSQSFVALCALQHV---REKRRHSDDLGFKAK----LWAIDELVSP 278

Query: 37  IALRTEHHFSKW 2
           IA R E+HFSKW
Sbjct: 279 IASRIEYHFSKW 290


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