BLASTX nr result

ID: Coptis24_contig00014406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014406
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   226   1e-57
ref|NP_001062344.1| Os08g0532900 [Oryza sativa Japonica Group] g...   223   1e-56
ref|XP_003574832.1| PREDICTED: transmembrane emp24 domain-contai...   222   2e-56
ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|1...   221   4e-56
ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E...   219   2e-55

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  226 bits (577), Expect = 1e-57
 Identities = 101/127 (79%), Positives = 114/127 (89%)
 Frame = -3

Query: 382 LVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVDLI 203
           +VV+  L  LQ V GIRFV+DRE+CFSH V+ EGDTVHVSFVVIKADA WHY+EDGVDL+
Sbjct: 13  IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72

Query: 202 VKGPSGDQIHDSRDKTSEKFEFVIHRKGLHQFCFTNKSPYHETIDFDIHVGHFTYFDQHA 23
           +KGPSGDQIHD RDKTSEKFEFV  +KGLH+FCFTNKSPY ETIDFD+HVGHFTY+DQHA
Sbjct: 73  IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132

Query: 22  QDEHFNP 2
           +DEHFNP
Sbjct: 133 KDEHFNP 139


>ref|NP_001062344.1| Os08g0532900 [Oryza sativa Japonica Group]
           gi|42761389|dbj|BAD11657.1| coated vesicle membrane
           protein-like [Oryza sativa Japonica Group]
           gi|113624313|dbj|BAF24258.1| Os08g0532900 [Oryza sativa
           Japonica Group] gi|125562326|gb|EAZ07774.1| hypothetical
           protein OsI_30027 [Oryza sativa Indica Group]
           gi|125604135|gb|EAZ43460.1| hypothetical protein
           OsJ_28066 [Oryza sativa Japonica Group]
           gi|215707128|dbj|BAG93588.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740562|dbj|BAG97218.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 212

 Score =  223 bits (568), Expect = 1e-56
 Identities = 98/137 (71%), Positives = 120/137 (87%)
 Frame = -3

Query: 412 MEIRSYKYVILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPW 233
           ME+ S++ V L+VL  +  L+  + IRFVIDREECFSH+VE EGDTVHVSFVVIKAD PW
Sbjct: 1   MEVLSWRTVCLLVLCTVALLRPAAAIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPW 60

Query: 232 HYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVIHRKGLHQFCFTNKSPYHETIDFDIHV 53
           HYSEDGVDL+VK P+G Q+ DSRDKTS+KFEF++ ++G+H+FCFTNKSPYHET+DFD+HV
Sbjct: 61  HYSEDGVDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYHETVDFDVHV 120

Query: 52  GHFTYFDQHAQDEHFNP 2
           GHF+YFDQHA+DEHF P
Sbjct: 121 GHFSYFDQHAKDEHFAP 137


>ref|XP_003574832.1| PREDICTED: transmembrane emp24 domain-containing protein A-like
           [Brachypodium distachyon]
          Length = 213

 Score =  222 bits (566), Expect = 2e-56
 Identities = 99/137 (72%), Positives = 119/137 (86%)
 Frame = -3

Query: 412 MEIRSYKYVILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPW 233
           ME  S++   LVVL  L  L+  +GIRFVIDREECFSH+VE EGDTVHVSFVVIKAD PW
Sbjct: 2   MEALSWRTACLVVLCVLPFLRPAAGIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPW 61

Query: 232 HYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVIHRKGLHQFCFTNKSPYHETIDFDIHV 53
           HYSEDGVDL+VK P+G Q+ DSRDKTS+KF+F++ ++G+H+FCFTNKSPYHETIDFD+HV
Sbjct: 62  HYSEDGVDLVVKDPNGGQVRDSRDKTSDKFDFIVQKRGVHRFCFTNKSPYHETIDFDVHV 121

Query: 52  GHFTYFDQHAQDEHFNP 2
           GHF+YF+QHA+DEHF P
Sbjct: 122 GHFSYFEQHAKDEHFAP 138


>ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|118482006|gb|ABK92934.1|
           unknown [Populus trichocarpa]
           gi|222847640|gb|EEE85187.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  221 bits (564), Expect = 4e-56
 Identities = 97/130 (74%), Positives = 116/130 (89%)
 Frame = -3

Query: 391 YVILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGV 212
           Y ++++LA L S ++V GIRFVIDREECFSH V+ EGDTVHVSFVV+K D+ WHYS+DGV
Sbjct: 9   YFVVLLLALLSSPEAVFGIRFVIDREECFSHDVKYEGDTVHVSFVVVKVDSSWHYSDDGV 68

Query: 211 DLIVKGPSGDQIHDSRDKTSEKFEFVIHRKGLHQFCFTNKSPYHETIDFDIHVGHFTYFD 32
           DL+VKGPSGDQIHD RDK SEK EFV H+KG+H+FCFTNKSPYHETIDFD+HVGHF+Y+D
Sbjct: 69  DLVVKGPSGDQIHDFRDKISEKIEFVAHQKGVHRFCFTNKSPYHETIDFDVHVGHFSYYD 128

Query: 31  QHAQDEHFNP 2
           +HA+DEHF P
Sbjct: 129 EHAKDEHFQP 138


>ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera]
          Length = 922

 Score =  219 bits (558), Expect = 2e-55
 Identities = 96/126 (76%), Positives = 112/126 (88%)
 Frame = -3

Query: 379  VVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVDLIV 200
            +V+  L S+Q+V GIRFVIDREECFSH+VE EGDT+H SFVVIK DA WHY++DGVDL+V
Sbjct: 722  IVILVLLSVQAVCGIRFVIDREECFSHNVEYEGDTIHASFVVIKVDASWHYNKDGVDLVV 781

Query: 199  KGPSGDQIHDSRDKTSEKFEFVIHRKGLHQFCFTNKSPYHETIDFDIHVGHFTYFDQHAQ 20
            KGPSG+QI D RDKTSEKFEF+ H KGLH+FCFTNKSPYHETIDFD++ GHF Y+DQHA+
Sbjct: 782  KGPSGNQIQDYRDKTSEKFEFMAHEKGLHRFCFTNKSPYHETIDFDVYTGHFAYYDQHAK 841

Query: 19   DEHFNP 2
            DEHFNP
Sbjct: 842  DEHFNP 847


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