BLASTX nr result
ID: Coptis24_contig00014399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014399
(1890 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634397.1| PREDICTED: putative transcription elongation... 665 0.0
ref|XP_002265283.2| PREDICTED: putative transcription elongation... 665 0.0
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera] 665 0.0
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis... 649 0.0
ref|XP_004148818.1| PREDICTED: putative transcription elongation... 648 0.0
>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 2 [Vitis vinifera]
Length = 1044
Score = 665 bits (1717), Expect = 0.0
Identities = 354/535 (66%), Positives = 414/535 (77%), Gaps = 10/535 (1%)
Frame = -3
Query: 1576 FIVDSGAELQEEDDGRRKERGPFFPQXXXXXXXXXXEQTIQNRYGPE-YGDYDDEMN-VE 1403
FIVD+GAEL +EDDG+R R P PQ E+ IQ RYG + +YD+E VE
Sbjct: 105 FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164
Query: 1402 QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSVIALDHLKNYIYVEA 1223
QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG VQIRS IALDHLKNYIY+EA
Sbjct: 165 QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224
Query: 1222 DKEAHVKEACKGLRSIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 1043
DKEAHVKEACKGLR+IY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225 DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284
Query: 1042 XXXXXXXXXXXXXXKLIPRIDLQSLANKLDGREFVKKKVV-PAQRPMNIDEASEMHIRVV 866
+LIPRIDLQ+LANKL+GRE V KK P R MN++EA EMHIRV
Sbjct: 285 KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344
Query: 865 SRRDPITGDYFENIADMMFKHGFLFKTVSMRSISSQNIQPTFDEFEKFWKP---KDGYYD 695
RRDP+TGDYFENI MMFK GFL+KTVSM+SIS QNIQPTFDE EKF P +DG D
Sbjct: 345 RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDG--D 402
Query: 694 IASFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWIEKVEDEIVHIRLKMKGLHETICIN 515
+AS STL +R+K HFMKGDAV+I++GDLK+L GW+EKVE+E VHIR +MKGL +T+ +N
Sbjct: 403 MASLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVN 462
Query: 514 KKSLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXX 335
+K LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D
Sbjct: 463 EKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEV 522
Query: 334 XXXXTRLGDYELRDLVLLNN-GFGVIIRVESEAFQVLKGNANKPEVVFVKLREIKRKIEH 158
TR+GDYEL DLVLL+N FGVIIRVESEAFQVLKG ++PEVV VKLREIK KI+
Sbjct: 523 TSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDK 582
Query: 157 RFS---RANNIVCEKDVVRIVKGPYKGKQGSVDRIHGGVLFIKDRHHLEHAGYIC 2
R + R N V KDVVRI+ GP KGKQG V+ I+ GVLFI DRHHLEHAG+IC
Sbjct: 583 RVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKGVLFIYDRHHLEHAGFIC 637
>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 1 [Vitis vinifera]
gi|302142757|emb|CBI19960.3| unnamed protein product
[Vitis vinifera]
Length = 1034
Score = 665 bits (1717), Expect = 0.0
Identities = 354/535 (66%), Positives = 414/535 (77%), Gaps = 10/535 (1%)
Frame = -3
Query: 1576 FIVDSGAELQEEDDGRRKERGPFFPQXXXXXXXXXXEQTIQNRYGPE-YGDYDDEMN-VE 1403
FIVD+GAEL +EDDG+R R P PQ E+ IQ RYG + +YD+E VE
Sbjct: 105 FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164
Query: 1402 QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSVIALDHLKNYIYVEA 1223
QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG VQIRS IALDHLKNYIY+EA
Sbjct: 165 QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224
Query: 1222 DKEAHVKEACKGLRSIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 1043
DKEAHVKEACKGLR+IY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225 DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284
Query: 1042 XXXXXXXXXXXXXXKLIPRIDLQSLANKLDGREFVKKKVV-PAQRPMNIDEASEMHIRVV 866
+LIPRIDLQ+LANKL+GRE V KK P R MN++EA EMHIRV
Sbjct: 285 KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344
Query: 865 SRRDPITGDYFENIADMMFKHGFLFKTVSMRSISSQNIQPTFDEFEKFWKP---KDGYYD 695
RRDP+TGDYFENI MMFK GFL+KTVSM+SIS QNIQPTFDE EKF P +DG D
Sbjct: 345 RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDG--D 402
Query: 694 IASFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWIEKVEDEIVHIRLKMKGLHETICIN 515
+AS STL +R+K HFMKGDAV+I++GDLK+L GW+EKVE+E VHIR +MKGL +T+ +N
Sbjct: 403 MASLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVN 462
Query: 514 KKSLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXX 335
+K LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D
Sbjct: 463 EKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEV 522
Query: 334 XXXXTRLGDYELRDLVLLNN-GFGVIIRVESEAFQVLKGNANKPEVVFVKLREIKRKIEH 158
TR+GDYEL DLVLL+N FGVIIRVESEAFQVLKG ++PEVV VKLREIK KI+
Sbjct: 523 TSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDK 582
Query: 157 RFS---RANNIVCEKDVVRIVKGPYKGKQGSVDRIHGGVLFIKDRHHLEHAGYIC 2
R + R N V KDVVRI+ GP KGKQG V+ I+ GVLFI DRHHLEHAG+IC
Sbjct: 583 RVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKGVLFIYDRHHLEHAGFIC 637
>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
Length = 1107
Score = 665 bits (1717), Expect = 0.0
Identities = 354/535 (66%), Positives = 414/535 (77%), Gaps = 10/535 (1%)
Frame = -3
Query: 1576 FIVDSGAELQEEDDGRRKERGPFFPQXXXXXXXXXXEQTIQNRYGPE-YGDYDDEMN-VE 1403
FIVD+GAEL +EDDG+R R P PQ E+ IQ RYG + +YD+E VE
Sbjct: 105 FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164
Query: 1402 QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSVIALDHLKNYIYVEA 1223
QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG VQIRS IALDHLKNYIY+EA
Sbjct: 165 QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224
Query: 1222 DKEAHVKEACKGLRSIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 1043
DKEAHVKEACKGLR+IY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225 DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284
Query: 1042 XXXXXXXXXXXXXXKLIPRIDLQSLANKLDGREFVKKKVV-PAQRPMNIDEASEMHIRVV 866
+LIPRIDLQ+LANKL+GRE V KK P R MN++EA EMHIRV
Sbjct: 285 KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344
Query: 865 SRRDPITGDYFENIADMMFKHGFLFKTVSMRSISSQNIQPTFDEFEKFWKP---KDGYYD 695
RRDP+TGDYFENI MMFK GFL+KTVSM+SIS QNIQPTFDE EKF P +DG D
Sbjct: 345 RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDG--D 402
Query: 694 IASFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWIEKVEDEIVHIRLKMKGLHETICIN 515
+AS STL +R+K HFMKGDAV+I++GDLK+L GW+EKVE+E VHIR +MKGL +T+ +N
Sbjct: 403 MASLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVN 462
Query: 514 KKSLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXX 335
+K LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D
Sbjct: 463 EKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEV 522
Query: 334 XXXXTRLGDYELRDLVLLNN-GFGVIIRVESEAFQVLKGNANKPEVVFVKLREIKRKIEH 158
TR+GDYEL DLVLL+N FGVIIRVESEAFQVLKG ++PEVV VKLREIK KI+
Sbjct: 523 TSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDK 582
Query: 157 RFS---RANNIVCEKDVVRIVKGPYKGKQGSVDRIHGGVLFIKDRHHLEHAGYIC 2
R + R N V KDVVRI+ GP KGKQG V+ I+ GVLFI DRHHLEHAG+IC
Sbjct: 583 RVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKGVLFIYDRHHLEHAGFIC 637
>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
gi|223534550|gb|EEF36249.1| suppressor of ty, putative
[Ricinus communis]
Length = 1045
Score = 649 bits (1674), Expect = 0.0
Identities = 341/532 (64%), Positives = 405/532 (76%), Gaps = 7/532 (1%)
Frame = -3
Query: 1576 FIVDSGAELQEEDDGRRKERGPFFPQXXXXXXXXXXEQTIQNRYG-PEYGDYDDEMN-VE 1403
FIVD+GA+L +EDDGRR R P P+ E+ IQ RY + +YD+E VE
Sbjct: 113 FIVDNGADLPDEDDGRRVHRRPLLPREDDQEDMEALERRIQARYARSSHTEYDEETTEVE 172
Query: 1402 QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSVIALDHLKNYIYVEA 1223
QQALLPSV+DPKLW+VKC IG ERE AV LMQK +KGS +QIRS IALDHLKNYIY+EA
Sbjct: 173 QQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYIEA 232
Query: 1222 DKEAHVKEACKGLRSIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 1043
DKEAHV+EACKGLR+IY+ K++ VPIKEMTDVLSVESKAID+SRD+WVRMK G YKGD+A
Sbjct: 233 DKEAHVREACKGLRNIYAQKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 292
Query: 1042 XXXXXXXXXXXXXXKLIPRIDLQSLANKLDGREFVKKKV-VPAQRPMNIDEASEMHIRVV 866
KLIPRIDLQ+LANKL+GRE KKK VP R MN+DEA E+HIRV
Sbjct: 293 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNVDEARELHIRVE 352
Query: 865 SRRDPITGDYFENIADMMFKHGFLFKTVSMRSISSQNIQPTFDEFEKFWKPKDGYYDIAS 686
RRDP++GDYFENI M+FK GFL+KTVSM+SIS QNI+PTFDE EKF KP + DI
Sbjct: 353 RRRDPMSGDYFENIGGMLFKDGFLYKTVSMKSISVQNIKPTFDELEKFRKPGENDGDIVG 412
Query: 685 FSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWIEKVEDEIVHIRLKMKGLHETICINKKS 506
STL +R+K HF+KGDAV+I++GDLK+L GW+EKV++E VHI+ +MK L TI +N+K
Sbjct: 413 LSTLFANRKKGHFVKGDAVIIVKGDLKNLKGWVEKVDEENVHIKPEMKDLPRTIAVNEKE 472
Query: 505 LCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXXX 326
LCKYF+PG+HVKVVSG +EG TGMV+KVE HVLII+SD TKE IRVF+D
Sbjct: 473 LCKYFEPGNHVKVVSGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 532
Query: 325 XTRLGDYELRDLVLLNN-GFGVIIRVESEAFQVLKGNANKPEVVFVKLREIKRKIEHRFS 149
T++GDYEL DLVLL+N FGVIIRVESEAFQVLKG +PEV V+LREIK KIE +F+
Sbjct: 533 VTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGVPERPEVALVRLREIKCKIEKKFN 592
Query: 148 ---RANNIVCEKDVVRIVKGPYKGKQGSVDRIHGGVLFIKDRHHLEHAGYIC 2
R N + KDVVRI+ GP KGKQG V+ I+ GVLFI DRHHLEHAG+IC
Sbjct: 593 VQDRYKNTIAVKDVVRIIDGPCKGKQGPVEHIYKGVLFIYDRHHLEHAGFIC 644
>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Cucumis sativus]
Length = 1044
Score = 648 bits (1672), Expect = 0.0
Identities = 340/533 (63%), Positives = 410/533 (76%), Gaps = 8/533 (1%)
Frame = -3
Query: 1576 FIVDSGAELQEEDDGRRKERGPFFPQXXXXXXXXXXEQTIQNRYG-PEYGDYDDEMN-VE 1403
FIVD+ A++ +EDD RR R P P+ E+ IQ RY + +YD+E VE
Sbjct: 109 FIVDNVADIPDEDDNRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVE 168
Query: 1402 QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSVIALDHLKNYIYVEA 1223
QQALLPSV+DPKLW+VKC IG EREAAV LMQK ++G +QIRS +ALDHLKN+IY+EA
Sbjct: 169 QQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDRGPEMQIRSAVALDHLKNFIYIEA 228
Query: 1222 DKEAHVKEACKGLRSIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 1043
DKEAHV+EACKGLR+IY+ K+ VPIKEMTDVLSVESKAID+SRD+WVRMK G YKGD+A
Sbjct: 229 DKEAHVREACKGLRNIYAQKITLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 288
Query: 1042 XXXXXXXXXXXXXXKLIPRIDLQSLANKLDGREFVKKKV-VPAQRPMNIDEASEMHIRVV 866
KLIPRIDLQ+LANKL+GRE KKK VP R MNIDEA E+HIRV
Sbjct: 289 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVE 348
Query: 865 SRRDPITGDYFENIADMMFKHGFLFKTVSMRSISSQNIQPTFDEFEKFWKP-KDGYYDIA 689
RRDPITG+YFENI M FK GFL+KTVSM+SIS+QNI+PTFDE EKF KP ++G DIA
Sbjct: 349 RRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIA 408
Query: 688 SFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWIEKVEDEIVHIRLKMKGLHETICINKK 509
S STL +R+K HFMKGDAV++++GDLK+L GW+EKVE+E VHIR +MKGL +T+ +N++
Sbjct: 409 SLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNER 468
Query: 508 SLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXX 329
LCKYF+PG+HVKVVSG +EG TGMV+KV+ HVLII+SD TKE IRVF+D
Sbjct: 469 ELCKYFEPGNHVKVVSGTQEGATGMVVKVDQHVLIILSDTTKEHIRVFADDVVESSEVTT 528
Query: 328 XXTRLGDYELRDLVLLNN-GFGVIIRVESEAFQVLKGNANKPEVVFVKLREIKRKIEHRF 152
TR+GDYEL DLVLL+N FGVIIRVE+EAFQVLKG ++PEV VKLREIK KI+ +
Sbjct: 529 GVTRIGDYELHDLVLLDNMSFGVIIRVETEAFQVLKGTPDRPEVDIVKLREIKSKIDKKI 588
Query: 151 S---RANNIVCEKDVVRIVKGPYKGKQGSVDRIHGGVLFIKDRHHLEHAGYIC 2
S R NN + KDVVRI++GP KGKQG V+ I+ G+LFI DRHHLEHAG+IC
Sbjct: 589 SVQDRFNNTISSKDVVRILEGPCKGKQGPVEHIYRGILFIYDRHHLEHAGFIC 641