BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014357
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...   228   5e-58
ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arab...   225   3e-57
ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] ...   225   3e-57
ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [S...   223   2e-56
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...   221   4e-56

>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  228 bits (580), Expect = 5e-58
 Identities = 110/137 (80%), Positives = 125/137 (91%)
 Frame = +1

Query: 1   LCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQSVPTWTVRHVGGAMRGAGAEQLS 180
           LCGV +ER RIHELCLKSGPNLG V+SEVRLLCDLEQ  PTWTV+HVGGAMRGAGAEQ+S
Sbjct: 24  LCGVHRERLRIHELCLKSGPNLGIVASEVRLLCDLEQPEPTWTVKHVGGAMRGAGAEQIS 83

Query: 181 VVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSFHFQKSAQLKVSVTSVHKMPKLHA 360
           V+VR MVESKASKNVLR FY+LGYKLDHELL+VGF+FHFQ+ A++ V V+SV+KM KLHA
Sbjct: 84  VLVRTMVESKASKNVLRLFYALGYKLDHELLRVGFAFHFQRGARITVRVSSVNKMLKLHA 143

Query: 361 VEEAIPVTPGIQLVEVT 411
            +EA+PVTPGIQLVEVT
Sbjct: 144 TDEAVPVTPGIQLVEVT 160


>ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp.
           lyrata] gi|297326279|gb|EFH56699.1| hypothetical protein
           ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/137 (75%), Positives = 125/137 (91%)
 Frame = +1

Query: 1   LCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQSVPTWTVRHVGGAMRGAGAEQLS 180
           LCGV +ER R+HELCLKSGPNLG VSSEVRLLCDL+Q  PTWTV+HVGG MRGAGA+Q+S
Sbjct: 26  LCGVKRERLRVHELCLKSGPNLGVVSSEVRLLCDLDQPEPTWTVKHVGGPMRGAGADQIS 85

Query: 181 VVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSFHFQKSAQLKVSVTSVHKMPKLHA 360
           V+VR M+ESK SKN LR FY+LGYKLDHELLKVGF+FHFQ++A + VSV+SV+KMPK+HA
Sbjct: 86  VMVRTMIESKVSKNALRMFYALGYKLDHELLKVGFAFHFQRTAHISVSVSSVNKMPKVHA 145

Query: 361 VEEAIPVTPGIQLVEVT 411
           ++EA+PVTPG+Q+V+VT
Sbjct: 146 IDEAVPVTPGMQIVDVT 162


>ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           18 gi|4544453|gb|AAD22361.1| expressed protein
           [Arabidopsis thaliana] gi|117168219|gb|ABK32192.1|
           At2g22370 [Arabidopsis thaliana]
           gi|330252204|gb|AEC07298.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/137 (75%), Positives = 126/137 (91%)
 Frame = +1

Query: 1   LCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQSVPTWTVRHVGGAMRGAGAEQLS 180
           LCGV +ER R+HELCL+SGPNLG VSSEVRLLCDL+Q  PTWTV+HVGGAMRGAGA+Q+S
Sbjct: 26  LCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQPEPTWTVKHVGGAMRGAGADQIS 85

Query: 181 VVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSFHFQKSAQLKVSVTSVHKMPKLHA 360
           V+VR M+ESK SKN LR FY+LGYKLDHELLKVGF+FHFQ++A + VSV+SV+KMPK+HA
Sbjct: 86  VLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAFHFQRTAHISVSVSSVNKMPKVHA 145

Query: 361 VEEAIPVTPGIQLVEVT 411
           ++EA+PVTPG+Q+V+VT
Sbjct: 146 IDEAVPVTPGMQIVDVT 162


>ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [Sorghum bicolor]
           gi|241931540|gb|EES04685.1| hypothetical protein
           SORBIDRAFT_04g006390 [Sorghum bicolor]
          Length = 217

 Score =  223 bits (567), Expect = 2e-56
 Identities = 104/137 (75%), Positives = 122/137 (89%)
 Frame = +1

Query: 1   LCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQSVPTWTVRHVGGAMRGAGAEQLS 180
           L GVPKER R+HELCLKSGPNLG V SEVRLLCDL Q  P+WT+RHVGGAMRGAGAEQ+S
Sbjct: 24  LSGVPKERVRVHELCLKSGPNLGVVPSEVRLLCDLAQPTPSWTIRHVGGAMRGAGAEQIS 83

Query: 181 VVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSFHFQKSAQLKVSVTSVHKMPKLHA 360
           V+VR +VESKASKNVL +FY+LGYKLDHELLK+GF+F F + AQ+ V+VTS +KMP+LHA
Sbjct: 84  VLVRTIVESKASKNVLHYFYTLGYKLDHELLKIGFAFRFHRGAQITVTVTSTNKMPRLHA 143

Query: 361 VEEAIPVTPGIQLVEVT 411
            +EA+PVTPGIQLVE+T
Sbjct: 144 TDEAVPVTPGIQLVEIT 160


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score =  221 bits (564), Expect = 4e-56
 Identities = 105/137 (76%), Positives = 123/137 (89%)
 Frame = +1

Query: 1   LCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQSVPTWTVRHVGGAMRGAGAEQLS 180
           LCGV +ER RIHELCLKSGPNLG V+SEVR+LCDLEQ  PTW VRH+GGAMRG+GAEQ+S
Sbjct: 24  LCGVHRERLRIHELCLKSGPNLGLVASEVRVLCDLEQPEPTWIVRHIGGAMRGSGAEQIS 83

Query: 181 VVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSFHFQKSAQLKVSVTSVHKMPKLHA 360
           V+VR MVESK SKNVLR FY+LGY+LDHELL+VGF+FHFQ+ A + V+V+SV+KM KLHA
Sbjct: 84  VLVRTMVESKVSKNVLRLFYALGYRLDHELLRVGFAFHFQRGASITVTVSSVNKMLKLHA 143

Query: 361 VEEAIPVTPGIQLVEVT 411
            +EA+PVTPGIQLVEVT
Sbjct: 144 TDEAVPVTPGIQLVEVT 160