BLASTX nr result
ID: Coptis24_contig00014343
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014343 (761 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ... 144 2e-32 ref|XP_002305996.1| high mobility group family [Populus trichoca... 140 2e-31 ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-... 140 4e-31 ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus... 139 5e-31 ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-... 139 9e-31 >ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera] gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 144 bits (363), Expect = 2e-32 Identities = 65/80 (81%), Positives = 73/80 (91%) Frame = -1 Query: 554 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 375 D KPKKPPTAFFY+LEDFR +QEQNPDVKSMRD+GKACGEKWKTMTYEEKV+YYDIAT Sbjct: 84 DSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 143 Query: 374 EKRKEFEQAMADYERRKERG 315 EKR EF++AMADY +R+E G Sbjct: 144 EKRAEFDRAMADYIKRQESG 163 >ref|XP_002305996.1| high mobility group family [Populus trichocarpa] gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa] Length = 165 Score = 140 bits (354), Expect = 2e-31 Identities = 64/80 (80%), Positives = 72/80 (90%) Frame = -1 Query: 554 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 375 D KPKKPPTAFFY+LEDFR +QEQNPDVKSMR+VGKACGEKWKTMTYEEKVKYYDIAT Sbjct: 73 DAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIAT 132 Query: 374 EKRKEFEQAMADYERRKERG 315 EKR EF++A ++Y +RKE G Sbjct: 133 EKRAEFDRATSEYIKRKESG 152 >ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus] gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus] Length = 161 Score = 140 bits (352), Expect = 4e-31 Identities = 62/80 (77%), Positives = 73/80 (91%) Frame = -1 Query: 554 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 375 D +KPKKPPTAFFY+L+DFR +QEQNPDVK+MRDVGKACGEKWKTMTYEEKV+YYDIAT Sbjct: 69 DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIAT 128 Query: 374 EKRKEFEQAMADYERRKERG 315 EKR EF++AM +Y++R E G Sbjct: 129 EKRAEFDKAMTEYKKRMESG 148 >ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis] gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis] Length = 198 Score = 139 bits (351), Expect = 5e-31 Identities = 62/80 (77%), Positives = 72/80 (90%) Frame = -1 Query: 554 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 375 D KPKKPPTAFFY+LEDFR +Q+QNPDVKSMR++GKACGEKWK MTYEEKVKYYDIAT Sbjct: 106 DSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDIAT 165 Query: 374 EKRKEFEQAMADYERRKERG 315 EKR EF++AMA+Y ++KE G Sbjct: 166 EKRAEFDKAMAEYIKKKESG 185 >ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max] Length = 148 Score = 139 bits (349), Expect = 9e-31 Identities = 61/80 (76%), Positives = 72/80 (90%) Frame = -1 Query: 554 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 375 D KPKKPPTAFFY+LEDFR +QEQNPDVKSMRD+GKACGEKWKTMTYEEKV+YYDIAT Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115 Query: 374 EKRKEFEQAMADYERRKERG 315 +KR+EF+ AMA++ ++ E G Sbjct: 116 KKREEFDNAMAEFNKKMENG 135