BLASTX nr result

ID: Coptis24_contig00014337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014337
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   294   3e-77
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   274   2e-71
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   251   2e-64
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   249   8e-64
ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like ...   248   2e-63

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  294 bits (752), Expect = 3e-77
 Identities = 150/250 (60%), Positives = 187/250 (74%), Gaps = 9/250 (3%)
 Frame = +1

Query: 64  SLLDEAXXXXXXXXXXX-IEDCVETSGAFILDHFIKRALS---STQGVVLLIALAHPFSH 231
           +LLDEA            IEDCVET+GAF+L H +KR+L+   S+   V+ +A + PFSH
Sbjct: 8   TLLDEALALDWTQPRVIVIEDCVETNGAFVLHHVLKRSLALHTSSTSAVIFLAFSQPFSH 67

Query: 232 YERILRKQGCNLVTQSENSRFFFFDMLKLDCPEG-----AGGLVELYQKIRKAVEVISSH 396
           Y+RILRK GCNLVT  +N RF FF++L L+CP+G     +GGL  LY++I+K +  I+ H
Sbjct: 68  YDRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLYREIQKVI--IALH 125

Query: 397 KHNRSDITIMIDDISLMEVAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIA 576
           + NR  ITIMIDDISLMEVAA  S N+V DFLHYCHTLT E GC LV +NH DIYSS   
Sbjct: 126 EENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNHGDIYSSMER 185

Query: 577 PSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKES 756
           P+L+L+MEYLA+++IK EPL+TGLATDVHGQLTVLNKGI +  G  RNR HNFHFK+KE+
Sbjct: 186 PALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGNSRNRTHNFHFKVKEN 245

Query: 757 SVDYFYPGSR 786
           SV+ FYPG+R
Sbjct: 246 SVECFYPGTR 255


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  274 bits (701), Expect = 2e-71
 Identities = 135/232 (58%), Positives = 173/232 (74%), Gaps = 8/232 (3%)
 Frame = +1

Query: 115 IEDCVETSGAFILDHFIKRALSSTQ--GVVLLIALAHPFSHYERILRKQGCNLVTQSENS 288
           IEDCVETSG F+L   +KR LSS      V+ +A +HP SHY+RILRK GCNLV Q EN 
Sbjct: 31  IEDCVETSGCFVLHQLLKRTLSSQSPNNTVIFLAFSHPLSHYDRILRKLGCNLVAQRENG 90

Query: 289 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 450
           RFFFFDMLKL CP+      G GG   LY KI+  +  +   ++N++  TIMIDD+SLME
Sbjct: 91  RFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQNTICALP--ENNKNHATIMIDDMSLME 148

Query: 451 VAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 630
           VAA  S ++V +F+HYCHTLTSE+GCSL+ LNH+DIY+S   P+ ML+ +YL +++IK E
Sbjct: 149 VAAHGSSDHVLNFMHYCHTLTSELGCSLITLNHEDIYTSMERPTFMLQTKYLVDVLIKAE 208

Query: 631 PLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 786
           PLATGLA DVHGQLTVLN+   +  G+ +N+I NFHFK+KE+SV+YFYPG+R
Sbjct: 209 PLATGLAADVHGQLTVLNRDFCNVKGSSKNKISNFHFKVKENSVEYFYPGTR 260


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  251 bits (641), Expect = 2e-64
 Identities = 132/253 (52%), Positives = 167/253 (66%), Gaps = 26/253 (10%)
 Frame = +1

Query: 115 IEDCVETSGAFILDHFIKRALSSTQ-GVVLLIALAHPFSHYERILRKQGCNLVTQSENSR 291
           IED VETSG+F+L+H IKR LS     V++ +A ++PFSHY+RILRK GCNL    +  R
Sbjct: 32  IEDRVETSGSFLLNHLIKRILSPNSFKVIIFLAFSNPFSHYDRILRKLGCNLAAHKDCGR 91

Query: 292 FFFFDMLKLDCP-------------------------EGAGGLVELYQKIRKAVEVISSH 396
           FFFFDML L C                              G + L+ +I+K +  +  +
Sbjct: 92  FFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNEGNSNKAGFITLFGEIQKVICALPEN 151

Query: 397 KHNRSDITIMIDDISLMEVAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIA 576
             N   +TIMIDD+SLMEVAA  S + V DFLHYCHTLTS+ GCSLV LNH+DIYS+   
Sbjct: 152 YKNH--VTIMIDDVSLMEVAAYGSSDRVLDFLHYCHTLTSDFGCSLVTLNHEDIYSTMER 209

Query: 577 PSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKES 756
            + +L+MEYLA+++IK EPLATGLATDVHGQLTVL+ GI    G L+N+I NF F +KE+
Sbjct: 210 RAFILQMEYLADILIKAEPLATGLATDVHGQLTVLSTGICCRKGNLKNKISNFQFMVKEN 269

Query: 757 SVDYFYPGSRNLG 795
           SV+YFYPGSR  G
Sbjct: 270 SVEYFYPGSRTCG 282


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  249 bits (636), Expect = 8e-64
 Identities = 130/232 (56%), Positives = 165/232 (71%), Gaps = 8/232 (3%)
 Frame = +1

Query: 115 IEDCVETSGAFILDHFIKRALSS--TQGVVLLIALAHPFSHYERILRKQGCNLVTQSENS 288
           +EDCVETSGAF+L H +KRA SS  +  VV+ +A +  F HY+RILRK GCNL  Q ++ 
Sbjct: 31  VEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFSQSFIHYDRILRKLGCNLAAQRDSG 90

Query: 289 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 450
           RF FFDML L C +      G G LV LY KI++AV  +   + N+  ITI+IDDISL+E
Sbjct: 91  RFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQRAVHALI--QENKKHITIVIDDISLLE 148

Query: 451 VAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 630
           VAA  S N+V DFLHYCHTL SEVGCS++ L+H+D+Y     P L L++EYLA+++IKV 
Sbjct: 149 VAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIERP-LSLQLEYLADVLIKVG 207

Query: 631 PLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 786
           PLATG+A DVHGQLTVLNK +      LRNR+ NF F IKE+  ++FY GSR
Sbjct: 208 PLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSR 259


>ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  248 bits (632), Expect = 2e-63
 Identities = 135/261 (51%), Positives = 172/261 (65%), Gaps = 15/261 (5%)
 Frame = +1

Query: 49  ESMEQSLLDEAXXXXXXXXXXX----IEDCVETSGAFILDHFIKRALSS--TQGVVLLIA 210
           + M  +LLDEA               +EDCVETSGAF+L H +KRA SS  +  VV+ +A
Sbjct: 2   DRMTSNLLDEAIGFDDPTPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLA 61

Query: 211 LAHPFSHYERILRKQGCNLVTQSENSRFFFFDMLKLDCP---------EGAGGLVELYQK 363
            +  F HY+RILRK GCNL  Q ++ RF FFDML L C           G G LV LY K
Sbjct: 62  FSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSGEKTRSGKETGEGVLVGLYCK 121

Query: 364 IRKAVEVISSHKHNRSDITIMIDDISLMEVAACASFNYVSDFLHYCHTLTSEVGCSLVVL 543
           I++AV  +   + N+  +TI+IDDISL+EVAA  S N+V DFLHYCHTL SEVGCS++ L
Sbjct: 122 IQRAVHALI--QENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIAL 179

Query: 544 NHDDIYSSTIAPSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNR 723
           +H+D+Y     P L L++EYLA+++IKV PLATG+A DVHGQLTVLNK +      LRNR
Sbjct: 180 DHEDVYMDIERP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNR 238

Query: 724 IHNFHFKIKESSVDYFYPGSR 786
           + NF F IKE+  ++FY GSR
Sbjct: 239 VQNFQFYIKENGTEFFYSGSR 259


Top