BLASTX nr result

ID: Coptis24_contig00014335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014335
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 ...   445   e-123
ref|XP_002521990.1| conserved hypothetical protein [Ricinus comm...   436   e-120
ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]                        434   e-119

>ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|222858035|gb|EEE95582.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  449 bits (1155), Expect = e-124
 Identities = 222/302 (73%), Positives = 250/302 (82%)
 Frame = -1

Query: 906 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRTFLHKVLDYDDEFFALLM 727
           MLFQVGGQG RPTFFEMAAAQQLPASLRAALTYSIGV+ALRR FLHKVLD +DEFF+LLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDCEDEFFSLLM 60

Query: 726 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKAGDRLHHSGLEKHQRVLSVAF 547
           LVLETHSLRTT+ASFAESLYGLRRRAVK++V K+++R K+GD + HSGLEKHQR+LSV F
Sbjct: 61  LVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVF 120

Query: 546 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 367
           LVVLPYFKSKLHSIYNKEREA LQASLWG  D   +D++YF  G+ S V+  TL +E + 
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATI 180

Query: 366 WTHIQKRIEAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 187
              + K+I+ I+ +CYPW+HA +EG++FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE 240

Query: 186 LMDTXXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTTLDYAQTGLIAAVFFFKMMEWW 7
           LMDT               RGPPWLKT Q  LLSC YT LDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWW 300

Query: 6   YQ 1
           YQ
Sbjct: 301 YQ 302


>ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 [Vitis vinifera]
           gi|302143588|emb|CBI22341.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  445 bits (1145), Expect = e-123
 Identities = 223/302 (73%), Positives = 246/302 (81%)
 Frame = -1

Query: 906 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRTFLHKVLDYDDEFFALLM 727
           MLFQVGGQG RPTFFEM+AAQQLPASLRAALTYSIGVLALRR FLH+VLDY+DEFFALLM
Sbjct: 1   MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSIGVLALRRPFLHRVLDYEDEFFALLM 60

Query: 726 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKAGDRLHHSGLEKHQRVLSVAF 547
           LVLE+HSLRTT+ASF+ESLYGLRRRAV+++V KDN+ + + D +HHSGLEK+Q+ LSV F
Sbjct: 61  LVLESHSLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLF 120

Query: 546 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 367
           LVVLPYFKSKLHS+YNKEREATLQASLWG  D RFDD+DYF     S + +     E S 
Sbjct: 121 LVVLPYFKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSV 180

Query: 366 WTHIQKRIEAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 187
              + KR +  IG  YPW+HAGNEGL+FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKRFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 186 LMDTXXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTTLDYAQTGLIAAVFFFKMMEWW 7
           LMDT               RGPPWLK LQ  LLSC YT LDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIAAVFFFKMMEWW 300

Query: 6   YQ 1
           YQ
Sbjct: 301 YQ 302


>ref|XP_002521990.1| conserved hypothetical protein [Ricinus communis]
           gi|223538794|gb|EEF40394.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  436 bits (1122), Expect = e-120
 Identities = 220/302 (72%), Positives = 243/302 (80%)
 Frame = -1

Query: 906 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRTFLHKVLDYDDEFFALLM 727
           MLFQVGGQG RPTFFEMAAAQQLP SLRAALTYSIGVLALRR  LHKVLDY+DEFFAL M
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPTSLRAALTYSIGVLALRRPLLHKVLDYEDEFFALFM 60

Query: 726 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKAGDRLHHSGLEKHQRVLSVAF 547
           LVLETHSLRTT+ASF+ESLYGLRRR VK++V K ++R   GD +  SGL+K QR+LSVAF
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRGVKIQVKKKDARLNLGDGIELSGLQKRQRILSVAF 120

Query: 546 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 367
           LVVLPYFKSKL+S+YNKEREA LQASLWG     F+ +DYFD  + S V+ GT+ SE + 
Sbjct: 121 LVVLPYFKSKLYSLYNKEREARLQASLWGDGGGPFEGTDYFDRDDGSLVSRGTMESEATI 180

Query: 366 WTHIQKRIEAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 187
              + KRI+ II ACYPW+HA +EGL+F YQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKRIQKIIFACYPWVHATSEGLSFTYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 186 LMDTXXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTTLDYAQTGLIAAVFFFKMMEWW 7
           LMDT               RGPPWLKTLQ  LLSC Y  LDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSRERERLRGPPWLKTLQGALLSCTYAVLDYAQTGLIAAVFFFKMMEWW 300

Query: 6   YQ 1
           YQ
Sbjct: 301 YQ 302


>ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|222862649|gb|EEF00156.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  436 bits (1121), Expect = e-120
 Identities = 219/302 (72%), Positives = 243/302 (80%)
 Frame = -1

Query: 906 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRTFLHKVLDYDDEFFALLM 727
           MLFQVGGQG RPTFFEMAAAQQLPASLRAALTYSIGVLALRR FLHKVLD++DEFF+LLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDHEDEFFSLLM 60

Query: 726 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKAGDRLHHSGLEKHQRVLSVAF 547
           LVLETHSLRTT+ASF+ESLYGLRRR VK++V K++ R  +GD + HSGLEKHQR+LSV F
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVF 120

Query: 546 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 367
           LVVLPYFKSKL+SIYNKEREA LQASLWG  D   +D++YF  GE S V     S E + 
Sbjct: 121 LVVLPYFKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFSGGEASLV-----SRETTI 175

Query: 366 WTHIQKRIEAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 187
              + K+I+ I+  CYPW+HA NEG++FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 176 RARLMKKIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 235

Query: 186 LMDTXXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTTLDYAQTGLIAAVFFFKMMEWW 7
           LMDT                GPPWLK LQ  LLSC YT LDYAQTGLIAAVF FKMMEWW
Sbjct: 236 LMDTTSRISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIAAVFIFKMMEWW 295

Query: 6   YQ 1
           YQ
Sbjct: 296 YQ 297


>dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]
          Length = 393

 Score =  434 bits (1115), Expect = e-119
 Identities = 215/302 (71%), Positives = 240/302 (79%)
 Frame = -1

Query: 906 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRTFLHKVLDYDDEFFALLM 727
           MLFQVGGQG RPTFFEMAAAQQLP+SLRAALTYS+GVLALRR F+HK+LDY+DE FALLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLM 60

Query: 726 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKAGDRLHHSGLEKHQRVLSVAF 547
           LVLETHSLRTT+ SFAESLYGLRRRAVK+KV  DN      + ++H+GLEK Q+VLSV F
Sbjct: 61  LVLETHSLRTTDGSFAESLYGLRRRAVKIKVKGDNKGPDVREEINHTGLEKRQKVLSVVF 120

Query: 546 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 367
           LV+LPY +SKLHSIYNKERE  LQA+LWG  D RF D+DYFD    S V+  +  +E S 
Sbjct: 121 LVILPYLRSKLHSIYNKEREVALQATLWGHEDERFGDTDYFDGAGNSTVSMSSSDAEESV 180

Query: 366 WTHIQKRIEAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 187
              ++K+I  I+ ACYPWIHAGNEG +FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RDRLRKKIRKIVAACYPWIHAGNEGFSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 186 LMDTXXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTTLDYAQTGLIAAVFFFKMMEWW 7
           LMDT               RGPPWLK +Q  LLSC Y  LDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSHERERLRGPPWLKAVQSGLLSCAYGVLDYAQTGLIAAVFFFKMMEWW 300

Query: 6   YQ 1
           YQ
Sbjct: 301 YQ 302


Top