BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014327
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   275   1e-71
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated prot...   260   2e-67
ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2...   251   9e-65

>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  275 bits (702), Expect = 1e-71
 Identities = 155/289 (53%), Positives = 191/289 (66%), Gaps = 32/289 (11%)
 Frame = -1

Query: 773 IDCYSRSIALSPTAVTFANRAMAYLKIKRFEEAENDCTEALNLDDRYTKAYSRRATARKE 594
           IDCYSRSIAL PTAV +ANRAMAY+KIKRF EAE+DC EALNLDDRY KAYSRRATARKE
Sbjct: 125 IDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKE 184

Query: 593 LGKLKASLEDSEFALRLEPQNQELKKQHAEAKAMYDKELLKKASETMKSSTQGAQRV--- 423
           LGK K + ED+EFALRLEPQNQE+KKQ+AEAK++Y+KE+L+KAS  +KSS QG Q+V   
Sbjct: 185 LGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKS 244

Query: 422 ----IGNENRIKEVVGRSANAGNRSL------------------------REDSNGSQEG 327
                 +   ++ +   S  AG  ++                        R   NG  E 
Sbjct: 245 VVEVNADTQGVRSISSSSQGAGEAAIQDRFMVPANTSTSMEETENKGTGNRSKENGYLEN 304

Query: 326 ATLKP-IADISKNVHGMKKQEVRMSVQELXXXXXXXXXXXAGKSITSPKSAYQFEISWRG 150
           A     + D+  N H   ++E++ S+QEL           A K+IT+P SAYQFE+SWRG
Sbjct: 305 AVQNSGLEDVMSN-HKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRG 363

Query: 149 VSGDVALQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETE 3
           + GD ALQA  LKAISP +LP +FKN+LSA +LIDIIKCIATFF  E +
Sbjct: 364 LLGDHALQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMD 412


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  275 bits (702), Expect = 1e-71
 Identities = 155/289 (53%), Positives = 191/289 (66%), Gaps = 32/289 (11%)
 Frame = -1

Query: 773  IDCYSRSIALSPTAVTFANRAMAYLKIKRFEEAENDCTEALNLDDRYTKAYSRRATARKE 594
            IDCYSRSIAL PTAV +ANRAMAY+KIKRF EAE+DC EALNLDDRY KAYSRRATARKE
Sbjct: 748  IDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKE 807

Query: 593  LGKLKASLEDSEFALRLEPQNQELKKQHAEAKAMYDKELLKKASETMKSSTQGAQRV--- 423
            LGK K + ED+EFALRLEPQNQE+KKQ+AEAK++Y+KE+L+KAS  +KSS QG Q+V   
Sbjct: 808  LGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKS 867

Query: 422  ----IGNENRIKEVVGRSANAGNRSL------------------------REDSNGSQEG 327
                  +   ++ +   S  AG  ++                        R   NG  E 
Sbjct: 868  VVEVNADTQGVRSISSSSQGAGEAAIQDRFMVPANTSTSMEETENKGTGNRSKENGYLEN 927

Query: 326  ATLKP-IADISKNVHGMKKQEVRMSVQELXXXXXXXXXXXAGKSITSPKSAYQFEISWRG 150
            A     + D+  N H   ++E++ S+QEL           A K+IT+P SAYQFE+SWRG
Sbjct: 928  AVQNSGLEDVMSN-HKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRG 986

Query: 149  VSGDVALQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETE 3
            + GD ALQA  LKAISP +LP +FKN+LSA +LIDIIKCIATFF  E +
Sbjct: 987  LLGDHALQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMD 1035


>ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|222871711|gb|EEF08842.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  264 bits (675), Expect = 1e-68
 Identities = 149/269 (55%), Positives = 187/269 (69%), Gaps = 12/269 (4%)
 Frame = -1

Query: 773 IDCYSRSIALSPTAVTFANRAMAYLKIKR----FEEAENDCTEALNLDDRYTKAYSRRAT 606
           I+CYSRSIALSPTAV +ANRAMAYLKIKR    F EAE+DCTEALNLDDRY KAYSRRAT
Sbjct: 115 IECYSRSIALSPTAVAYANRAMAYLKIKRQFFLFREAEDDCTEALNLDDRYIKAYSRRAT 174

Query: 605 ARKELGKLKASLEDSEFALRLEPQNQELKKQHAEAKAMYDK-------ELLKKASETMKS 447
           ARKELGKLK S+EDSEFAL+LEP NQE+KKQ+AE K++Y+K       E+L+KAS T++S
Sbjct: 175 ARKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKASDYLMLEILQKASGTLRS 234

Query: 446 STQGAQRVIGNENRIKEVVGRS-ANAGNRSLREDSNGSQEGATLKPIADISKNVHGMKKQ 270
           S QG Q+            GRS A+    ++   S  +Q+        D +K  +  ++Q
Sbjct: 235 SLQGTQQ-----------GGRSEASVNGHAVHPVSIATQKTGVSASKKDNTKKNNRTRRQ 283

Query: 269 EVRMSVQELXXXXXXXXXXXAGKSITSPKSAYQFEISWRGVSGDVALQARLLKAISPPSL 90
           E++ SV EL           A K+IT P SAYQFE+SW+G SGD ALQA LLK  SP +L
Sbjct: 284 ELKTSVIELASQAASRAMAEAAKNITPPNSAYQFEVSWQGFSGDRALQAHLLKVTSPSAL 343

Query: 89  PHLFKNSLSAALLIDIIKCIATFFREETE 3
           P +FKN+LS  +LIDIIKC+A+FF ++ +
Sbjct: 344 PQIFKNALSVPILIDIIKCVASFFIDDMD 372


>ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated protein 3-like [Cucumis
           sativus] gi|449517788|ref|XP_004165926.1| PREDICTED: RNA
           polymerase II-associated protein 3-like [Cucumis
           sativus]
          Length = 458

 Score =  260 bits (665), Expect = 2e-67
 Identities = 152/292 (52%), Positives = 195/292 (66%), Gaps = 37/292 (12%)
 Frame = -1

Query: 773 IDCYSRSIALSPTAVTFANRAMAYLKIKRFEEAENDCTEALNLDDRYTKAYSRRATARKE 594
           IDCYSRSIALSPTAV FANRAMAYLKI+RF+EAE+DCTEALNLDDRY KAYSRRATARKE
Sbjct: 103 IDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 162

Query: 593 LGKLKASLEDSEFALRLEPQNQELKKQHAEAKAMYDKELLKKASETMKSSTQGAQRVIGN 414
           LGK K +LED+EFA RLEP NQE+KKQHA+ +A   K +L+KAS   +SST+  + +  +
Sbjct: 163 LGKAKEALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSTKNKKTLKKS 222

Query: 413 EN--RIKEVVGRSA----------------NAGNRSLR-----EDSNGSQEGA--TLKPI 309
           ++  +I+++   S+                N G  +++     E+S  +  GA  T K +
Sbjct: 223 DSDAKIQDIPPVSSSTSRTGLLAARERVEENGGGNAVKTSARLEESEDTSSGAEITSKKV 282

Query: 308 A------DISKNV------HGMKKQEVRMSVQELXXXXXXXXXXXAGKSITSPKSAYQFE 165
           A      D S  +      H  +KQE++ SV EL           A K+I +P +AYQFE
Sbjct: 283 ATNGFHKDSSSYLSALERDHLPRKQELKASVYELASQAASRSMVEAAKNIIAPTTAYQFE 342

Query: 164 ISWRGVSGDVALQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREE 9
           +SWRG SGD ALQARLLK ISP  LP +FK++L+A +LIDI+KC+ATFF EE
Sbjct: 343 VSWRGFSGDQALQARLLKTISPAKLPQIFKDALTAPILIDIVKCVATFFIEE 394


>ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1|
            predicted protein [Populus trichocarpa]
          Length = 471

 Score =  251 bits (642), Expect = 9e-65
 Identities = 147/315 (46%), Positives = 192/315 (60%), Gaps = 58/315 (18%)
 Frame = -1

Query: 773  IDCYSRSIALSPTAVTFANRAMAYLKIKRFEEAENDCTEALNLDDRYTKAYSRRATARKE 594
            I+CYSRSIALSPTAV +ANRAMAYLKIKR  +AE+DCTEALNLDDRY KAYSRRAT RKE
Sbjct: 101  IECYSRSIALSPTAVAYANRAMAYLKIKR--QAEDDCTEALNLDDRYIKAYSRRATTRKE 158

Query: 593  LGKLKASLEDSEFALRLEPQNQELKKQHAEAKAMYDKE------------------LLKK 468
            LGKLK S+EDSEFAL+LEP NQE+KKQ+AE K++Y+K                    + K
Sbjct: 159  LGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKASDSTICCYSGCYISLLQFFVTK 218

Query: 467  ASETMKSSTQGAQR----------------------------------------VIGNEN 408
            ASE+++SS QGAQ+                                        V+    
Sbjct: 219  ASESLRSSLQGAQKGGRSEASVNGHAVHPVSNVTQRTGASASQKDKAKENDGDGVVKKSV 278

Query: 407  RIKEVVGRSANAGNRSLREDSNGSQEGATLKPIADISKNVHGMKKQEVRMSVQELXXXXX 228
             ++E+  +S  AG+RS  +  N S+  A     A+   ++    +QE++ SV+EL     
Sbjct: 279  YVEEIKNKSTGAGSRSDGQLGNDSRANAIPSSNAE---SIQVTGRQELKASVKELASQAA 335

Query: 227  XXXXXXAGKSITSPKSAYQFEISWRGVSGDVALQARLLKAISPPSLPHLFKNSLSAALLI 48
                  A K+IT P SAYQFE+SWRG SGD ALQA LLK ++P +LP +FKN+LS  +LI
Sbjct: 336  SRAMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVVTPSALPQIFKNALSVTILI 395

Query: 47   DIIKCIATFFREETE 3
            DIIKC+++FF ++ +
Sbjct: 396  DIIKCVSSFFIDDMD 410