BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014318
         (2756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              976   0.0  
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     974   0.0  
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   913   0.0  
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        874   0.0  
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         870   0.0  

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  976 bits (2522), Expect = 0.0
 Identities = 507/849 (59%), Positives = 623/849 (73%), Gaps = 21/849 (2%)
 Frame = -2

Query: 2689 KIWSDVAFDILYVGDTSVIHQSLKERHELLRKVVKPSKGRLEILVPNGGLNAHRPPGEPC 2510
            ++ S VAFDILYVGDTSVIHQ+LKERHELL+KVVKP KGR EILVP+GGLN HRP GEPC
Sbjct: 335  QVLSYVAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPC 394

Query: 2509 WSLIAYNVEEVQKFFNETIENRDEGIVLKDLGSKWEPSDRNGKWLKLKPDYIRAGSDLDV 2330
            WSLIAY+V++V++FF +T+ENRDEGIVLKDLGSKWEPSDR+GKWLKLKP+Y+ AGSDLDV
Sbjct: 395  WSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDV 454

Query: 2329 LIIXXXXXXXXXXGEVAQFLVGLAERSVPNIYPRRFISFCRVGTGLSDDELDALVTKLKP 2150
            LII          GEVAQFLVGLA+ S P+ YPRRFISFCRVGTGLSDDELDA+VTKLKP
Sbjct: 455  LIIGGYYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKP 514

Query: 2149 YFRKNEYPKRTP-SFYEVTNNSKERPEVWIESPEKSIILSITSDIRTIRSEAFAAPYCLR 1973
            YFRKNEYPK+ P SFY+VTNNSKERP++WI+SPEKSIILSITSDIRTIRSE FAAPY LR
Sbjct: 515  YFRKNEYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLR 574

Query: 1972 FPRIDRVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTGYGDFQENKPKRIKTSSKGDKKI 1793
            FPRID VRYDKPWHECLDVQSF++LVHSSNG TQRG  YG  Q++KPKR+K+S KG++K 
Sbjct: 575  FPRIDCVRYDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKT 634

Query: 1792 FSVVPSHFIKTDVSGVKEATCMFANMMFYFINVPPNHSLDSFHKMVAENGGSFSMNLNDS 1613
              VVPSHF++TDV+ VK  T +F+NMMFYF+N PP HSLDS HK+V ENGG+FSMNLN+S
Sbjct: 635  AHVVPSHFMQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNS 694

Query: 1612 VTHCIAAERKGIKYQAAKLRRDIIHYSWVLDCCSQKRLLHLQPKYFLFLADSSKTKLQSE 1433
            VTHC+AA+ KGIKYQAAKLR DIIH SWV DCCSQK+LL LQPKYFLFL++ SK KLQ E
Sbjct: 695  VTHCVAAQSKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEE 754

Query: 1432 LDEFSDSYFWDLDLMDIKQLLKNIDRLEDCKTIDYYTRKYCPKEK-CQFQDCQIYFH-LL 1259
            +D+FSDSY+ DLD+ DIKQLL N+DR ++ KTIDYY  KYCPKEK  +F DC I FH  +
Sbjct: 755  IDKFSDSYYQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSI 814

Query: 1258 HPLNTDWEILLELALKRMKLEVSMHGGEISNKLAHATHLVVLSVPGSDVDVETFFKSLSV 1079
               N+DWE+L +LAL+RMKLEVSM GG++ N L+ ATHLVV SVPG D+D     +S S 
Sbjct: 815  QSSNSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSP 874

Query: 1078 SDRRLLHSKRFYVVQYQWLEDSFEKDRKLNEDAYSLKLDELEESNTEISKHVL--ETLSS 905
            +++ LL +K+ +VV YQWLE   E+ R+L E  YSLK + LEESN    KH +  E  S 
Sbjct: 875  AEKHLLCNKKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSV 934

Query: 904  IDDAERENISASPVKDVERSGGKPAVQEHRISTFSERNRKRKRGRPTQANMKTRTNMKRR 725
            +D  E +N+ + P K+ ++  GK   +   I    +R+ KRKRGRP   + K        
Sbjct: 935  LDSVENQNLVSFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTK-------- 986

Query: 724  NIRGRPGHRAAKIDENEIEKSASSDDALHKDEVGSSGIHKRILEEDVGTKGNKGPVSIDT 545
              +G+ G   A+     I K       ++++E  +S   +++ EE     GN        
Sbjct: 987  --KGKAGFSQARRTRPRIGKPPK----IYENESDASDSGEKMEEEGTKMGGN------HA 1034

Query: 544  LHGDEAAEWSDKVDTTDLGGGNNSQYTEMAERSASVH-------------EIEREVKKNA 404
            +HG E  E  +  +T  +    +SQ  +  E+  ++              E++ E K + 
Sbjct: 1035 IHGVECKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDN 1094

Query: 403  S---EKLEVMVDPLEAMLLDMIPSLGVEKPETTNPVFEGKKPCIDPVLEQGKKKKVSYKD 233
            S   EKLEVMVDP++AMLLDMIPSLGV+K E+TNP+ + +KP ++   E  KKKKVSYKD
Sbjct: 1095 SKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKD 1154

Query: 232  VVGELLKDW 206
            V G LLKDW
Sbjct: 1155 VAGALLKDW 1163


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  974 bits (2519), Expect = 0.0
 Identities = 506/844 (59%), Positives = 620/844 (73%), Gaps = 21/844 (2%)
 Frame = -2

Query: 2674 VAFDILYVGDTSVIHQSLKERHELLRKVVKPSKGRLEILVPNGGLNAHRPPGEPCWSLIA 2495
            VAFDILYVGDTSVIHQ+LKERHELL+KVVKP KGR EILVP+GGLN HRP GEPCWSLIA
Sbjct: 339  VAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIA 398

Query: 2494 YNVEEVQKFFNETIENRDEGIVLKDLGSKWEPSDRNGKWLKLKPDYIRAGSDLDVLIIXX 2315
            Y+V++V++FF +T+ENRDEGIVLKDLGSKWEPSDR+GKWLKLKP+Y+ AGSDLDVLII  
Sbjct: 399  YDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGG 458

Query: 2314 XXXXXXXXGEVAQFLVGLAERSVPNIYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKN 2135
                    GEVAQFLVGLA+ S P+ YPRRFISFCRVGTGLSDDELDA+VTKLKPYFRKN
Sbjct: 459  YYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKN 518

Query: 2134 EYPKRTP-SFYEVTNNSKERPEVWIESPEKSIILSITSDIRTIRSEAFAAPYCLRFPRID 1958
            EYPK+ P SFY+VTNNSKERP++WI+SPEKSIILSITSDIRTIRSE FAAPY LRFPRID
Sbjct: 519  EYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRID 578

Query: 1957 RVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTGYGDFQENKPKRIKTSSKGDKKIFSVVP 1778
             VRYDKPWHECLDVQSF++LVHSSNG TQRG  YG  Q++KPKR+K+S KG++K   VVP
Sbjct: 579  CVRYDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVP 638

Query: 1777 SHFIKTDVSGVKEATCMFANMMFYFINVPPNHSLDSFHKMVAENGGSFSMNLNDSVTHCI 1598
            SHF++TDV+ VK  T +F+NMMFYF+N PP HSLDS HK+V ENGG+FSMNLN+SVTHC+
Sbjct: 639  SHFMQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCV 698

Query: 1597 AAERKGIKYQAAKLRRDIIHYSWVLDCCSQKRLLHLQPKYFLFLADSSKTKLQSELDEFS 1418
            AA+ KGIKYQAAKLR DIIH SWV DCCSQK+LL LQPKYFLFL++ SK KLQ E+D+FS
Sbjct: 699  AAQSKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFS 758

Query: 1417 DSYFWDLDLMDIKQLLKNIDRLEDCKTIDYYTRKYCPKEK-CQFQDCQIYFH-LLHPLNT 1244
            DSY+ DLD+ DIKQLL N+DR ++ KTIDYY  KYCPKEK  +F DC I FH  +   N+
Sbjct: 759  DSYYQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNS 818

Query: 1243 DWEILLELALKRMKLEVSMHGGEISNKLAHATHLVVLSVPGSDVDVETFFKSLSVSDRRL 1064
            DWE+L +LAL+RMKLEVSM GG++ N L+ ATHLVV SVPG D+D     +S S +++ L
Sbjct: 819  DWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHL 878

Query: 1063 LHSKRFYVVQYQWLEDSFEKDRKLNEDAYSLKLDELEESNTEISKHVL--ETLSSIDDAE 890
            L +K+ +VV YQWLE   E+ R+L E  YSLK + LEESN    KH +  E  S +D  E
Sbjct: 879  LCNKKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVE 938

Query: 889  RENISASPVKDVERSGGKPAVQEHRISTFSERNRKRKRGRPTQANMKTRTNMKRRNIRGR 710
             +N+ + P K+ ++  GK   +   I    +R+ KRKRGRP   + K          +G+
Sbjct: 939  NQNLVSFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTK----------KGK 988

Query: 709  PGHRAAKIDENEIEKSASSDDALHKDEVGSSGIHKRILEEDVGTKGNKGPVSIDTLHGDE 530
             G   A+     I K       ++++E  +S   +++ EE     GN        +HG E
Sbjct: 989  AGFSQARRTRPRIGKPPK----IYENESDASDSGEKMEEEGTKMGGN------HAIHGVE 1038

Query: 529  AAEWSDKVDTTDLGGGNNSQYTEMAERSASVH-------------EIEREVKKNAS---E 398
              E  +  +T  +    +SQ  +  E+  ++              E++ E K + S   E
Sbjct: 1039 CKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTE 1098

Query: 397  KLEVMVDPLEAMLLDMIPSLGVEKPETTNPVFEGKKPCIDPVLEQGKKKKVSYKDVVGEL 218
            KLEVMVDP++AMLLDMIPSLGV+K E+TNP+ + +KP ++   E  KKKKVSYKDV G L
Sbjct: 1099 KLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGAL 1158

Query: 217  LKDW 206
            LKDW
Sbjct: 1159 LKDW 1162


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
            predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  913 bits (2360), Expect = 0.0
 Identities = 504/910 (55%), Positives = 606/910 (66%), Gaps = 90/910 (9%)
 Frame = -2

Query: 2674 VAFDILYVGDTSVIHQSLKERHELLRKVVKPSKGRLEILVPNGGLNAHRPPGEPCWSLIA 2495
            VAFDILYVGDTSVIHQ+LKERHELLRKVVKP KGRLEILVPNGGLNAHR PGEP  SLIA
Sbjct: 348  VAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEILVPNGGLNAHRLPGEPYCSLIA 407

Query: 2494 YNVEEVQKFFNETIENRDEGIVLKDLGSKWEPSDRNGKWLKLKPDYIRAGSDLDVLIIXX 2315
            YNV++++KFF ETIENRDEGIVLKDLGSKWEPSDR+GKWLKLKP+YIRAGSDLDVLII  
Sbjct: 408  YNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGG 467

Query: 2314 XXXXXXXXGEVAQFLVGLAERSVPNIYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKN 2135
                    GEVAQFL+GLAER   N YPRRFISFCRVG GLSD+ELD +V+KLKPYFRKN
Sbjct: 468  YYGSGRRGGEVAQFLLGLAERPASNTYPRRFISFCRVGNGLSDEELDTVVSKLKPYFRKN 527

Query: 2134 EYPKRTP-SFYEVTNNSKERPEVWIESPEKSIILSITSDIRTIRSEAFAAPYCLRFPRID 1958
            EYPK +P SFY+VTNNSKERP+VWIE+P+KSIILSITSDIRTI SE F+APY LRFPRID
Sbjct: 528  EYPKNSPPSFYQVTNNSKERPDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRID 587

Query: 1957 RVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTGYGDFQENKPKRIKTSSKGDKKIFSVVP 1778
            RVRYDKPWHECLDVQSFV+LVHSSNG TQ+G GYG  Q++KP  IK+S KG+KK  SVVP
Sbjct: 588  RVRYDKPWHECLDVQSFVELVHSSNGTTQKGKGYGYVQDSKPTHIKSSRKGEKKSVSVVP 647

Query: 1777 SHFIKTDVSGVKEATCMFANMMFYFINVPPNHSLDSFHKMVAENGGSFSMNLNDSVTHCI 1598
            SH I+TD+S +K  T +F+NMMFYF+NVPP++SL+S HKMVAENGG+FSMNLN+SVTHCI
Sbjct: 648  SHLIQTDISDIKGETLIFSNMMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCI 707

Query: 1597 AAERKGIKYQAAKLRRDIIHYSWVLDCCSQKRLLHLQPKYFLFLADSSKTKLQSELDEFS 1418
            AAE KGIKYQAAKL  DIIHYSWVLDCC QK+LL LQPK FLFL+D SK KL  E+DEFS
Sbjct: 708  AAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFS 767

Query: 1417 DSYFWDLDLMDIKQLLKNIDRLEDCKTIDYYTRKYCPKEKCQ-FQDCQIYFHL-LHPLNT 1244
            DSY+WDLDL DIKQLL NI+  ED K ID   +KYCP+EK   F  C +YFH+    L  
Sbjct: 768  DSYYWDLDLSDIKQLLSNINASEDAKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827

Query: 1243 DWEILLELALKRMKLEVSMHGGEISNKLAHATHLVVLSVPGSDVDVETFFKSLSVSDRRL 1064
            DWE LL LA +R+KLE+ M GG++SN +AHATHLVVL VP SDVD  +  KS + +++  
Sbjct: 828  DWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSLVKSFTTAEKHF 887

Query: 1063 LHSKRFYVVQYQWLEDSFEKDRKLNEDAYSLKLDELEESNTEISKHVLETLSSIDDAERE 884
            L +KR YV+  QWLEDS E+ +KL ED Y+LK   LEESN +      E L S+ D+E  
Sbjct: 888  LLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESNCK------EVLPSVTDSE-- 939

Query: 883  NISASPVKDVERSGGKPAVQEHRISTFSERNRKRKRGRPTQANMKTRT--NMKRRNIRGR 710
                      +  G K A+++       E+   RKRGRP   + K       + R  R R
Sbjct: 940  ---------AKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRAR 990

Query: 709  PGHRAAKIDENEIEKSASSDDALHKDEV--GSSGIH-KRILEEDVGTKGNKG-------- 563
              ++ AKI   + ++S S DD   ++++  G+  IH  +      G    KG        
Sbjct: 991  IVNKPAKISVEKSDESCSHDDKNEENDMSDGNEEIHGGKPAGRPAGGSTKKGKIGAGQAL 1050

Query: 562  ---------PVSIDTLHGDEAAEWSDKVDTTDLGGGNN------SQYTEMAERSASVHEI 428
                     P  I     +E+    D+++  ++  GN       S+Y    +++ +V + 
Sbjct: 1051 RTRTRIANKPAKILEEKSEESCLHDDEIEENEMSEGNEEIHGPVSKYNLDIQQTKTVEDS 1110

Query: 427  EREVKKNAS---------------------------------EKLEVMVDPLEAMLLDMI 347
            E   +  A                                  EKLEVMVDP+ A+L+DMI
Sbjct: 1111 ESSRRDKAKEETAEENRHEEWLDKAPDVEMSERYYDQVTEKPEKLEVMVDPVHAILMDMI 1170

Query: 346  PSLGVEKPETTNPVFEGKK----PCIDPVLEQGK----------------------KKKV 245
            PSLG++K ETTNP    +K    P   P L   K                      KKKV
Sbjct: 1171 PSLGMKKGETTNPTIGNEKQAEGPYAQPSLSMKKVENTTPTLDTEKPSENPSLLPVKKKV 1230

Query: 244  SYKDVVGELL 215
            SYKD+  +LL
Sbjct: 1231 SYKDLAAKLL 1240


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  874 bits (2257), Expect = 0.0
 Identities = 472/847 (55%), Positives = 588/847 (69%), Gaps = 24/847 (2%)
 Frame = -2

Query: 2674 VAFDILYVGDTSVIHQSLKERHELLRKVVKPSKGRLEILVPNGGLNAHRPPGEPCWSLIA 2495
            VAFDILY GDTS+IHQ+LKERHE+L K+V+P KGRLEILVPN G+N+H   GEPCWS IA
Sbjct: 339  VAFDILYFGDTSLIHQTLKERHEILCKIVRPVKGRLEILVPNAGINSHISSGEPCWSFIA 398

Query: 2494 YNVEEVQKFFNETIENRDEGIVLKDLGSKWEPSDRNGKWLKLKPDYIRAGSDLDVLIIXX 2315
            +NV+EV++FF ETIENRDEGIVLKD  SKWEPSDR+GKWLKLKP+YI+AGSDLDVLII  
Sbjct: 399  HNVDEVERFFKETIENRDEGIVLKDHSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGG 458

Query: 2314 XXXXXXXXGEVAQFLVGLAERSVPNIYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKN 2135
                    GEVAQFLVGLAER  PN +P++FISFCRVGTGLSDDELDA+VTKLKPYFRK 
Sbjct: 459  YYGSGRRGGEVAQFLVGLAERPSPNTHPKQFISFCRVGTGLSDDELDAVVTKLKPYFRKY 518

Query: 2134 EYPK-RTPSFYEVTNNSKERPEVWIESPEKSIILSITSDIRTIRSEAFAAPYCLRFPRID 1958
            EYPK R PSFY+VTN+SKERP+VW++SPEKSIILSITSDIRTI SE F+APY LRFPRID
Sbjct: 519  EYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIILSITSDIRTIESEVFSAPYSLRFPRID 578

Query: 1957 RVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTGYGDFQENKPKRIKTSSKGDKKIFSVVP 1778
            RVRYDK W+ECLDVQSF++LVHSSNG TQR T YG  Q++KPKR K+S++G+KK  S+VP
Sbjct: 579  RVRYDKAWYECLDVQSFIELVHSSNGTTQRDTEYGSKQDSKPKRSKSSTRGEKKNLSIVP 638

Query: 1777 SHFIKTDVSGVKEATCMFANMMFYFINVPPNHSLDSFHKMVAENGGSFSMNLNDSVTHCI 1598
            SH I+TDVS +K  + +F+NMMFYF+NVP +HSL+S HK++AENGG+FSMNLN+SVTHC+
Sbjct: 639  SHLIQTDVSSIKGGSLIFSNMMFYFVNVPLSHSLESLHKIIAENGGTFSMNLNNSVTHCV 698

Query: 1597 AAERKGIKYQAAKLRRDIIHYSWVLDCCSQKRLLHLQPKYFLFLADSSKTKLQSELDEFS 1418
            AA+ KG K++AAK   DIIHYSWVLDC  QK+L+ LQPKYFLFL++ +K KLQ E+DEFS
Sbjct: 699  AADSKGFKFEAAKRHGDIIHYSWVLDCYDQKKLVCLQPKYFLFLSELTKKKLQEEIDEFS 758

Query: 1417 DSYFWDLDLMDIKQLLKNIDRLEDCKTIDYYTRKYCPKEKCQ-FQDCQIYFHLLHP-LNT 1244
            D+Y+ DLDL  IKQLL NIDR ED  T+D+Y +KYCPK+K   F  C IYFH   P L +
Sbjct: 759  DTYYLDLDLGVIKQLLSNIDRSEDVSTVDHYRKKYCPKDKWSFFYGCSIYFHSAIPSLKS 818

Query: 1243 DWEILLELALKRMKLEVSMHGGEISNKLAHATHLVVLSVPGSDVDVETFFKSLSVSDRRL 1064
            DW  +L+LA++R+KLEV M GG++++ L  ATHLVVL VPG   D E    S +   R++
Sbjct: 819  DWHFILQLAVRRLKLEVLMGGGKVTSNLTCATHLVVLLVPGYQTDFEQIQSSFTSVKRKI 878

Query: 1063 LHSKRFYVVQYQWLEDSFEKDRKLNEDAYSLKLDELEESNTEISKHV--LETLSSIDDAE 890
            L SKR ++V+ QWLED  +  ++L ED+YSLK   +EE+  E  +    LE   S D+ E
Sbjct: 879  LRSKRLHIVKSQWLEDCSDSCQRLPEDSYSLKPWGIEETTAEDCELELGLEAHQSGDNVE 938

Query: 889  RENISASPVKDVERSGGKPAVQEHRISTFSERNRKRKRGRPTQANM-KTRTNMKRRNIRG 713
             +NIS S  K +++   K A ++       E+  KRKRGRP  + + K +    ++  R 
Sbjct: 939  DQNISFSD-KGIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRA 997

Query: 712  RP--GHRAAKIDENEIEKSASSDDALHKDEVGSSGIHKRILEEDVGT--------KGNKG 563
            RP    + AKI E E             DE  S G  KR +E+++ T        K    
Sbjct: 998  RPQIAKKPAKICEYE-----------SSDESDSHG--KRPIEQEIDTRAGSLDFYKKRSE 1044

Query: 562  PVSIDTLHGDEAAEWSDKVDTTDLGGG---NNSQYTEMAERSASVHEIEREVKKNASEKL 392
            P   +     + AE     +   L      N+++   M      + +   E     +EKL
Sbjct: 1045 PQETEKRENVQVAEIEKNSEQNKLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKL 1104

Query: 391  EVMVDPLEAMLLDMIPSLGVEKPE--TTNPVFEGKKPCIDPVLEQ---GKKKKVSYKDVV 227
            E+  DPL+AML DMIPSL  +K E      V E K P       +    KKKKVSYKDV 
Sbjct: 1105 EISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 1164

Query: 226  GELLKDW 206
             ELLKDW
Sbjct: 1165 SELLKDW 1171


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  870 bits (2249), Expect = 0.0
 Identities = 448/699 (64%), Positives = 535/699 (76%), Gaps = 10/699 (1%)
 Frame = -2

Query: 2674 VAFDILYVGDTSVIHQSLKERHELLRKVVKPSKGRLEILVPNGGLNAHRPPGEPCWSLIA 2495
            VAFDILYVGDTSVIHQ+LKERHELLRKVVKP KGRLEILVPNGGLNAHR PGEP  SLIA
Sbjct: 348  VAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEILVPNGGLNAHRLPGEPYCSLIA 407

Query: 2494 YNVEEVQKFFNETIENRDEGIVLKDLGSKWEPSDRNGKWLKLKPDYIRAGSDLDVLIIXX 2315
            YNV++++KFF ETIENRDEGIVLKDLGSKWEPSDR+GKWLKLKP+YIRAGSDLDVLII  
Sbjct: 408  YNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGG 467

Query: 2314 XXXXXXXXGEVAQFLVGLAERSVPNIYPRRFISFCRVGTGLSDDELDALVTKLKPYFRKN 2135
                    GEVAQFL+GLAE    N YPRRFISFCRVG GLS++ELD +V+KLKPYFRKN
Sbjct: 468  YYGSGRRGGEVAQFLLGLAECPASNTYPRRFISFCRVGNGLSNEELDTVVSKLKPYFRKN 527

Query: 2134 EYPKRTP-SFYEVTNNSKERPEVWIESPEKSIILSITSDIRTIRSEAFAAPYCLRFPRID 1958
            EYPK +P SFY+VTNNSKERP+VWIE+P+KSIILSITSDIRTI SE F+APY LRFPRID
Sbjct: 528  EYPKNSPPSFYQVTNNSKERPDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRID 587

Query: 1957 RVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTGYGDFQENKPKRIKTSSKGDKKIFSVVP 1778
            RVRYDKPWHECLDVQSFV+LVHSSNG TQ+G GYGD Q++KP  IK+S KG+KK  SVVP
Sbjct: 588  RVRYDKPWHECLDVQSFVELVHSSNGTTQKGKGYGDVQDSKPTHIKSSRKGEKKSVSVVP 647

Query: 1777 SHFIKTDVSGVKEATCMFANMMFYFINVPPNHSLDSFHKMVAENGGSFSMNLNDSVTHCI 1598
            SH I+TD+S +K  T +F+NMMFY +NVPP++SL+S HKMVAENGG+FSMNLN+SVTHCI
Sbjct: 648  SHLIQTDISDIKGETLIFSNMMFYVVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCI 707

Query: 1597 AAERKGIKYQAAKLRRDIIHYSWVLDCCSQKRLLHLQPKYFLFLADSSKTKLQSELDEFS 1418
            AAE KGIKYQAAKL  DIIHYSWVLDCC QK+LL LQPK FLFL+D SK KL  E+DEFS
Sbjct: 708  AAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFS 767

Query: 1417 DSYFWDLDLMDIKQLLKNIDRLEDCKTIDYYTRKYCPKEKCQ-FQDCQIYFHL-LHPLNT 1244
            DSY+WDLDL DIKQLL NI+  ED K ID   +KYCP+EK   F  C +YFH+    L  
Sbjct: 768  DSYYWDLDLSDIKQLLSNINASEDGKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827

Query: 1243 DWEILLELALKRMKLEVSMHGGEISNKLAHATHLVVLSVPGSDVDVETFFKSLSVSDRRL 1064
            DWE LL LA +R+KLE+ M GG++SN +AHATHLVVL+VP SDVD  +  KS + +++  
Sbjct: 828  DWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLNVPASDVDFGSLVKSFTTAEKHF 887

Query: 1063 LHSKRFYVVQYQWLEDSFEKDRKLNEDAYSLKLDELEESNTE--ISKHVLETLSSIDD-A 893
            L +KR YV+  QWLEDS E+ +KL ED Y+LK   LEESN +  +    +E  + I D A
Sbjct: 888  LLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESNCKEIVCDLDMEEATPISDGA 947

Query: 892  ERENISASPVKDVERSGGKPAVQEHRISTFSERNRKRKRGRPTQANMKTRT--NMKRRNI 719
            + E + +    + +  G K A+++       E+   RKRGRP   + K       + +  
Sbjct: 948  KNERLPSVTDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQAQRT 1007

Query: 718  RGRPGHRAAKIDENEIEKSASSDDALHKDEV--GSSGIH 608
            R R  ++ AKI   + ++S S DD   ++++  G+  IH
Sbjct: 1008 RARIVNKPAKISVEKSDESCSQDDKNEENDMSDGNEEIH 1046



 Score = 78.6 bits (192), Expect = 9e-12
 Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 40/211 (18%)
 Frame = -2

Query: 727  RNIRGRPGHRAAKIDENEIEKSASSDDALHKDEV--GSSGIH------------KRILEE 590
            R  R R  ++ AKI E + E+S   DD + ++E+  G+  IH             +++E+
Sbjct: 1127 RRTRTRIANKPAKILEEKSEESCLHDDEIEENEMSEGNEEIHGPDSKYNLDIQQTKMVED 1186

Query: 589  DVGTKGNKGPVSIDTLHGDEAAEWSDKVDTTDLGGGNNSQYTEMAERSASVHEIEREVKK 410
               ++  +G     T   +   EW DK    ++ G    Q TE  E              
Sbjct: 1187 SESSR--RGKAKEATAEENRHEEWLDKAPDVEMSGRYYDQVTEKPE-------------- 1230

Query: 409  NASEKLEVMVDPLEAMLLDMIPSLGVEKPETTNPVFEGKKPC----------------ID 278
                KLEVMVDP+ A+L+DMIPSLG++K ETTNP  + +K                    
Sbjct: 1231 ----KLEVMVDPVHAILMDMIPSLGMKKGETTNPTIDNEKQAEGPYAQSSLSMKKVENTT 1286

Query: 277  PVLEQGK----------KKKVSYKDVVGELL 215
            P L+  K          KKKVSYKD+  +LL
Sbjct: 1287 PTLDTEKPAENPSLLPVKKKVSYKDLAAKLL 1317