BLASTX nr result

ID: Coptis24_contig00014313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014313
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   352   5e-95
ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   348   9e-94
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...   346   3e-93
ref|XP_003545531.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   346   3e-93
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   346   3e-93

>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  352 bits (903), Expect = 5e-95
 Identities = 170/224 (75%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
 Frame = -3

Query: 746  TSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKVE 570
            TSDILYYEV  IPLPEL+  KTLKVAFHH TK EV++  IRLPK+STVGD++NDLK KVE
Sbjct: 879  TSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKSKVE 938

Query: 569  LSPPNAELRLLEIFYHKIYKIYPATEKIENINDQYWTLRAEEIPEEEKNCGAHDHIIHVY 390
            LS PNAELRLLE+FYHKIYKI+P  EKIENINDQYWTLRAEEIPEEEKN G HD +IHVY
Sbjct: 939  LSHPNAELRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 998

Query: 389  HFTKDTSQNQMLVQNFGKPFLLVIHDGETLADVKVRIQKKLRVPVPDLCKWKFVYISLGR 210
            HF KDT+QNQ+ VQNFG+PF LVIH+GETLA+VKVRIQKKL+VP  +  KWKF ++SLGR
Sbjct: 999  HFMKDTTQNQVQVQNFGEPFFLVIHEGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGR 1058

Query: 209  AEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNGLHAANQ 78
             EYLQD+DIVS+RFQRR+++  WEQYLGLEHSD AP   +AANQ
Sbjct: 1059 PEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPKRSYAANQ 1102


>ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
            max]
          Length = 1118

 Score =  348 bits (892), Expect = 9e-94
 Identities = 166/224 (74%), Positives = 192/224 (85%), Gaps = 1/224 (0%)
 Frame = -3

Query: 746  TSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKVE 570
            TSDILYYEV  IPLPEL+  KTLKVAFHH TK EV++  IRLPK+STVGD+LNDLK KVE
Sbjct: 882  TSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLNDLKTKVE 941

Query: 569  LSPPNAELRLLEIFYHKIYKIYPATEKIENINDQYWTLRAEEIPEEEKNCGAHDHIIHVY 390
            LS P AELRLLE+FYHKIYK++P  EKIE+INDQYWTLRAEEIPEEEKN G HD +IHVY
Sbjct: 942  LSDPEAELRLLEVFYHKIYKVFPPNEKIESINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 1001

Query: 389  HFTKDTSQNQMLVQNFGKPFLLVIHDGETLADVKVRIQKKLRVPVPDLCKWKFVYISLGR 210
            HFTKDT+QNQM +QNFG+PF LVIH+GETLA++KVRIQKKL+VP  +  KWKF + SLGR
Sbjct: 1002 HFTKDTAQNQMQIQNFGEPFFLVIHEGETLAEIKVRIQKKLQVPDDEFVKWKFAFFSLGR 1061

Query: 209  AEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNGLHAANQ 78
             EYLQD+DIVS+RFQRR+++  WEQYLGLEH+D AP   +A NQ
Sbjct: 1062 PEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQ 1105


>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  346 bits (888), Expect = 3e-93
 Identities = 166/224 (74%), Positives = 192/224 (85%), Gaps = 1/224 (0%)
 Frame = -3

Query: 746  TSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKVE 570
            TSDILYYEV  IPLPEL+  KTLKVAFHH TK EV++  IRLPK+STVGD++NDLK KVE
Sbjct: 880  TSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVE 939

Query: 569  LSPPNAELRLLEIFYHKIYKIYPATEKIENINDQYWTLRAEEIPEEEKNCGAHDHIIHVY 390
            LS P+AELRLLE+FYHKIYKI+P  EKIENINDQYWTLRAEEIPEEEKN G HD +IHVY
Sbjct: 940  LSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 999

Query: 389  HFTKDTSQNQMLVQNFGKPFLLVIHDGETLADVKVRIQKKLRVPVPDLCKWKFVYISLGR 210
            HF KDT+QNQ+ VQNFG+PF LVIH+GE LADVK+R+Q+KL+VP  +  KWKF ++SLGR
Sbjct: 1000 HFMKDTTQNQVQVQNFGEPFFLVIHEGEALADVKMRVQRKLQVPDEEFSKWKFAFLSLGR 1059

Query: 209  AEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNGLHAANQ 78
             EYLQD+DIVS RFQRR+++  WEQYLGLEHSD AP   +AANQ
Sbjct: 1060 PEYLQDSDIVSNRFQRRDIYGAWEQYLGLEHSDNAPKRSYAANQ 1103


>ref|XP_003545531.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
            max]
          Length = 1126

 Score =  346 bits (887), Expect = 3e-93
 Identities = 165/224 (73%), Positives = 192/224 (85%), Gaps = 1/224 (0%)
 Frame = -3

Query: 746  TSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKVE 570
            TSDILYYEV  IPLPEL+  KTLKVAFHH TK EV++  IRLPK+STVGD+L+DLK KVE
Sbjct: 890  TSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVE 949

Query: 569  LSPPNAELRLLEIFYHKIYKIYPATEKIENINDQYWTLRAEEIPEEEKNCGAHDHIIHVY 390
            LS P AELRLLE+FYHKIYK++P  EKIE+INDQYWTLRAEEIPEEEKN G HD +IHVY
Sbjct: 950  LSDPEAELRLLEVFYHKIYKVFPPNEKIESINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 1009

Query: 389  HFTKDTSQNQMLVQNFGKPFLLVIHDGETLADVKVRIQKKLRVPVPDLCKWKFVYISLGR 210
            HFTKDT+QNQM +QNFG+PF LVIH+GETLA++KVRIQKKL+VP  +  KWKF + SLGR
Sbjct: 1010 HFTKDTAQNQMQIQNFGEPFFLVIHEGETLAEIKVRIQKKLQVPDDEFVKWKFAFFSLGR 1069

Query: 209  AEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNGLHAANQ 78
             EYLQD+DIVS+RFQRR+++  WEQYLGLEH+D AP   +A NQ
Sbjct: 1070 PEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQ 1113


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera]
          Length = 1117

 Score =  346 bits (887), Expect = 3e-93
 Identities = 166/224 (74%), Positives = 193/224 (86%), Gaps = 1/224 (0%)
 Frame = -3

Query: 746  TSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKVE 570
            +SDILYYEV  IPLPEL+  K LKVAFHH TK +VI+  IRLPK+STVGD++N+LK KVE
Sbjct: 881  SSDILYYEVLDIPLPELQGLKNLKVAFHHATKDDVIIHNIRLPKQSTVGDVINELKTKVE 940

Query: 569  LSPPNAELRLLEIFYHKIYKIYPATEKIENINDQYWTLRAEEIPEEEKNCGAHDHIIHVY 390
            LS PNAELRLLE+FYHKIYKI+P +EKIENINDQYWTLRAEEIPEEEKN G HD +IHVY
Sbjct: 941  LSHPNAELRLLEVFYHKIYKIFPPSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 1000

Query: 389  HFTKDTSQNQMLVQNFGKPFLLVIHDGETLADVKVRIQKKLRVPVPDLCKWKFVYISLGR 210
            HFTK+T QNQM VQNFG+PF L+IH+GETLA+VK RIQKKL+VP  +  KWKF ++SLGR
Sbjct: 1001 HFTKETVQNQMQVQNFGEPFFLIIHEGETLAEVKERIQKKLQVPDEEFSKWKFAFLSLGR 1060

Query: 209  AEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNGLHAANQ 78
             EYLQD+DIVS+RFQRR+++  WEQYLGLEHSD AP   +AANQ
Sbjct: 1061 PEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDTAPKRAYAANQ 1104


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