BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014301
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotei...    86   2e-15
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei...    86   2e-15
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...    86   2e-15
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...    83   2e-14
emb|CBI17535.3| unnamed protein product [Vitis vinifera]               81   8e-14

>ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Glycine max]
          Length = 465

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +3

Query: 78  MSDYGNNNDAFMRNSNAAVQARVKAQSRANVQQLKLIGQSHPTGLTSSLLKLF 236
           M D  +NNDAFMRN NAAVQAR KAQ+R+NV QLKLIGQSHPTGLT++LLKLF
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53


>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Glycine max]
          Length = 482

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +3

Query: 78  MSDYGNNNDAFMRNSNAAVQARVKAQSRANVQQLKLIGQSHPTGLTSSLLKLF 236
           M D  +NNDAFMRN NAAVQAR KAQ+R+NV QLKLIGQSHPTGLT++LLKLF
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
           max]
          Length = 481

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +3

Query: 78  MSDYGNNNDAFMRNSNAAVQARVKAQSRANVQQLKLIGQSHPTGLTSSLLKLF 236
           M D  +NNDAFMRN NAAVQAR KAQ+R+NV QLKLIGQSHPTGLT++LLKLF
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53


>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = +3

Query: 90  GNNNDAFMRNSNAAVQARVKAQSRANVQQLKLIGQSHPTGLTSSLLKLF 236
           G+ NDAFMRN NAAVQAR KAQ+RANV QLKLIGQSHPTGLT++LLKLF
Sbjct: 2   GDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +3

Query: 90  GNNNDAFMRNSNAAVQARVKAQSRANVQQLKLIGQSHPTGLTSSLLKLF 236
           G+ NDA MRN+NAAVQAR KAQ+RANV QLKLIGQSHPTGLT++LLKLF
Sbjct: 2   GDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50