BLASTX nr result
ID: Coptis24_contig00014294
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014294 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu... 78 9e-13 ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [... 59 5e-07 ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [... 55 8e-06 >ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis] gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis] Length = 465 Score = 77.8 bits (190), Expect = 9e-13 Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 3/103 (2%) Frame = +2 Query: 44 GTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRNQSVSVSNTFG 223 G C G STR SC + + + E + KRARV R +A E SR+QSVS S TFG Sbjct: 161 GNCVVGSSTRVGSCSAPTTATQDE--EALLAAKRARVARVPVAPEWSSRDQSVSGSATFG 218 Query: 224 RQRKYVRGVDSCEMELDTGFTSTSLGSDTNPNT---FDDRDSV 343 R +V +D+CEM+L GFTSTS GS N T D+ DSV Sbjct: 219 RDSHHVT-LDTCEMDLGVGFTSTSFGSQENTKTATAVDENDSV 260 >ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1| predicted protein [Populus trichocarpa] Length = 313 Score = 70.1 bits (170), Expect = 2e-10 Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 10/112 (8%) Frame = +2 Query: 38 GVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRNQSVSVSNT 217 G+GTC G STR SC A+ + + + KRARV R + E SR+QSV+ S T Sbjct: 155 GLGTCVVGCSTRVGSCSAPAATQDE---DGLLTGKRARVARVPVPPE-WSRDQSVNHSAT 210 Query: 218 FGRQRKYVRGVDSCEMELDTGFTSTSLGSDTNPN----------TFDDRDSV 343 FG++ VDSCE E GFTSTS GS N + T D+ DSV Sbjct: 211 FGKKDSQQMTVDSCEREFGVGFTSTSFGSQENTSSGTNPCTKTLTADENDSV 262 >ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max] Length = 458 Score = 58.5 bits (140), Expect = 5e-07 Identities = 47/119 (39%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Frame = +2 Query: 14 KRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRN 193 K+GM+ G GTC G STR SC G KG K E R+ Sbjct: 145 KQGMESVPG-GTCMVGCSTRVGSCCGG----KGAK-----------------GHEATGRD 182 Query: 194 QSVSVSNTFGRQRKYVRGVDSCEMELDTGFTSTSLGS---------DTNPNTFDDRDSV 343 QSVS S TFGR K+V +D+C+ E GFTSTS+ S T T DD DSV Sbjct: 183 QSVSGSATFGRDSKHVT-LDTCDREFGVGFTSTSINSLENTSSAKHCTKTTTVDDHDSV 240 >ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max] Length = 459 Score = 54.7 bits (130), Expect = 8e-06 Identities = 44/119 (36%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Frame = +2 Query: 14 KRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRN 193 K+GM+ G GTC G STR SC G KG K E R+ Sbjct: 152 KKGME--SGPGTCMVGCSTRVGSCCGG----KGAK-----------------GHEASGRD 188 Query: 194 QSVSVSNTFGRQRKYVRGVDSCEMELDTGFTSTSLGS---------DTNPNTFDDRDSV 343 QSVS S TFGR K+V +D+C+ E FTSTS+ S T T ++ DSV Sbjct: 189 QSVSGSATFGRDSKHVT-LDTCDREFGVAFTSTSINSLENTSYAKHCTKTTTIEEHDSV 246