BLASTX nr result

ID: Coptis24_contig00014294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014294
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...    78   9e-13
ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [...    59   5e-07
ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [...    55   8e-06

>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = +2

Query: 44  GTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRNQSVSVSNTFG 223
           G C  G STR  SC    +  + +  E  +  KRARV R  +A E  SR+QSVS S TFG
Sbjct: 161 GNCVVGSSTRVGSCSAPTTATQDE--EALLAAKRARVARVPVAPEWSSRDQSVSGSATFG 218

Query: 224 RQRKYVRGVDSCEMELDTGFTSTSLGSDTNPNT---FDDRDSV 343
           R   +V  +D+CEM+L  GFTSTS GS  N  T    D+ DSV
Sbjct: 219 RDSHHVT-LDTCEMDLGVGFTSTSFGSQENTKTATAVDENDSV 260


>ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = +2

Query: 38  GVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRNQSVSVSNT 217
           G+GTC  G STR  SC   A+ +     +  +  KRARV R  +  E  SR+QSV+ S T
Sbjct: 155 GLGTCVVGCSTRVGSCSAPAATQDE---DGLLTGKRARVARVPVPPE-WSRDQSVNHSAT 210

Query: 218 FGRQRKYVRGVDSCEMELDTGFTSTSLGSDTNPN----------TFDDRDSV 343
           FG++      VDSCE E   GFTSTS GS  N +          T D+ DSV
Sbjct: 211 FGKKDSQQMTVDSCEREFGVGFTSTSFGSQENTSSGTNPCTKTLTADENDSV 262


>ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 458

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 47/119 (39%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
 Frame = +2

Query: 14  KRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRN 193
           K+GM+   G GTC  G STR  SC G     KG K                   E   R+
Sbjct: 145 KQGMESVPG-GTCMVGCSTRVGSCCGG----KGAK-----------------GHEATGRD 182

Query: 194 QSVSVSNTFGRQRKYVRGVDSCEMELDTGFTSTSLGS---------DTNPNTFDDRDSV 343
           QSVS S TFGR  K+V  +D+C+ E   GFTSTS+ S          T   T DD DSV
Sbjct: 183 QSVSGSATFGRDSKHVT-LDTCDREFGVGFTSTSINSLENTSSAKHCTKTTTVDDHDSV 240


>ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 459

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/119 (36%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
 Frame = +2

Query: 14  KRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEETMVRKRARVPRAVLAREDCSRN 193
           K+GM+   G GTC  G STR  SC G     KG K                   E   R+
Sbjct: 152 KKGME--SGPGTCMVGCSTRVGSCCGG----KGAK-----------------GHEASGRD 188

Query: 194 QSVSVSNTFGRQRKYVRGVDSCEMELDTGFTSTSLGS---------DTNPNTFDDRDSV 343
           QSVS S TFGR  K+V  +D+C+ E    FTSTS+ S          T   T ++ DSV
Sbjct: 189 QSVSGSATFGRDSKHVT-LDTCDREFGVAFTSTSINSLENTSYAKHCTKTTTIEEHDSV 246


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