BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014286
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613697.1| Ran guanine nucleotide release factor [Medic...   296   8e-78
ref|XP_003518721.1| PREDICTED: ran guanine nucleotide release fa...   288   2e-75
ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide r...   287   4e-75
ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricin...   287   4e-75
ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycin...   284   3e-74

>ref|XP_003613697.1| Ran guanine nucleotide release factor [Medicago truncatula]
           gi|355515032|gb|AES96655.1| Ran guanine nucleotide
           release factor [Medicago truncatula]
          Length = 402

 Score =  296 bits (758), Expect = 8e-78
 Identities = 145/199 (72%), Positives = 171/199 (85%), Gaps = 4/199 (2%)
 Frame = -2

Query: 922 RMSSD----RPLFGGAIWSTFPLRFQDVSNIRQVPDHQEVYVDPSRDESLIVELLELKQE 755
           +MS D    RPLFGG I STFP RFQDVS+IRQVPDHQEV+ DPSRDESLIVELLE K +
Sbjct: 199 KMSQDVVYQRPLFGGKISSTFPNRFQDVSDIRQVPDHQEVFADPSRDESLIVELLEFKPD 258

Query: 754 VQDSASVAWFFQDLAREQDAQGSIVVEQSGIVELDGLRFRNMPAIMTTAVGQMSVSKGKQ 575
           + D  S AWF QDLAREQDA+G++V+EQSG++E  GL + N+PA++TTAVGQM++SKG+Q
Sbjct: 259 IADDGSAAWFLQDLAREQDAEGTVVIEQSGVLEAPGLMYNNIPAVVTTAVGQMAISKGRQ 318

Query: 574 GREAQNVVKVYLANLRLKGVGTDVLITAYEPIVISPFSESARTAGAGLAVPAMQSGCMQM 395
           GREAQN+VKVYLANLR+KGV TDVLITAYEPIVI+PFSESA T GAG+AVPA Q+GCM M
Sbjct: 319 GREAQNIVKVYLANLRVKGVDTDVLITAYEPIVINPFSESADTVGAGMAVPASQAGCMSM 378

Query: 394 ADVFKLAVSSFKVQDWNLF 338
            +VFKLA +SFKV DW+LF
Sbjct: 379 DEVFKLAATSFKVYDWSLF 397


>ref|XP_003518721.1| PREDICTED: ran guanine nucleotide release factor-like [Glycine max]
          Length = 198

 Score =  288 bits (738), Expect = 2e-75
 Identities = 140/189 (74%), Positives = 162/189 (85%)
 Frame = -2

Query: 904 PLFGGAIWSTFPLRFQDVSNIRQVPDHQEVYVDPSRDESLIVELLELKQEVQDSASVAWF 725
           PLFGG I STFP RFQDVSNIRQVPDHQEV+ DPS DESLI ELLE K +V D+ S AWF
Sbjct: 10  PLFGGKIASTFPHRFQDVSNIRQVPDHQEVFADPSHDESLIFELLEFKPDVADNGSAAWF 69

Query: 724 FQDLAREQDAQGSIVVEQSGIVELDGLRFRNMPAIMTTAVGQMSVSKGKQGREAQNVVKV 545
            QDLA EQDA+GS+V+EQSG++E  GL ++NMPA++ TAVGQM++SKG+QGREAQN VKV
Sbjct: 70  LQDLATEQDAEGSVVIEQSGVLEAPGLMYKNMPAVVITAVGQMAISKGRQGREAQNFVKV 129

Query: 544 YLANLRLKGVGTDVLITAYEPIVISPFSESARTAGAGLAVPAMQSGCMQMADVFKLAVSS 365
           YLANL LKGV TDVL+TAYEPIVI+PFSESA T GAG+AVPA Q+GCM M +VFKLAV+S
Sbjct: 130 YLANLHLKGVDTDVLVTAYEPIVINPFSESADTVGAGVAVPAAQAGCMPMEEVFKLAVTS 189

Query: 364 FKVQDWNLF 338
           F+V DW LF
Sbjct: 190 FRVHDWGLF 198


>ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide release factor-like
           [Cucumis sativus] gi|449478418|ref|XP_004155313.1|
           PREDICTED: probable ran guanine nucleotide release
           factor-like [Cucumis sativus]
          Length = 202

 Score =  287 bits (735), Expect = 4e-75
 Identities = 140/195 (71%), Positives = 168/195 (86%)
 Frame = -2

Query: 916 SSDRPLFGGAIWSTFPLRFQDVSNIRQVPDHQEVYVDPSRDESLIVELLELKQEVQDSAS 737
           S++R LFGGAI STFPLRFQDVSN+RQVPDHQEV+VDPSRDESLI ELL+ K +V D+ S
Sbjct: 6   STERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGS 65

Query: 736 VAWFFQDLAREQDAQGSIVVEQSGIVELDGLRFRNMPAIMTTAVGQMSVSKGKQGREAQN 557
             WF QDLA EQDA+GS+V+EQSG++E   L + N+P++ TTAVGQM++SKG+QGREAQN
Sbjct: 66  AVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQGREAQN 125

Query: 556 VVKVYLANLRLKGVGTDVLITAYEPIVISPFSESARTAGAGLAVPAMQSGCMQMADVFKL 377
           +V+VYLANLRLKGVGTDVLI+AYEPIVI+P SESA + G+GLA PA  SG M M +VFKL
Sbjct: 126 IVRVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLATPASHSGYMPMPEVFKL 185

Query: 376 AVSSFKVQDWNLFGS 332
           AVSSFKV DW+LFG+
Sbjct: 186 AVSSFKVCDWSLFGA 200


>ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricinus communis]
           gi|223536556|gb|EEF38202.1| Nuclear import protein mog1,
           putative [Ricinus communis]
          Length = 203

 Score =  287 bits (735), Expect = 4e-75
 Identities = 135/194 (69%), Positives = 169/194 (87%)
 Frame = -2

Query: 913 SDRPLFGGAIWSTFPLRFQDVSNIRQVPDHQEVYVDPSRDESLIVELLELKQEVQDSASV 734
           ++RPLFGGAI ++FPLRFQDVSNIRQVPDHQEV+VDP+RDESLI ELL+ K ++ D+ S 
Sbjct: 7   TERPLFGGAITTSFPLRFQDVSNIRQVPDHQEVFVDPARDESLIFELLDFKHDIGDNGSA 66

Query: 733 AWFFQDLAREQDAQGSIVVEQSGIVELDGLRFRNMPAIMTTAVGQMSVSKGKQGREAQNV 554
            WF QDLA EQDA+G  ++EQSG+VE  GL +R+ P +++TAVGQM++SKG+QGREAQNV
Sbjct: 67  TWFLQDLANEQDAEGCTLIEQSGVVEAPGLLYRDNPTVVSTAVGQMNISKGRQGREAQNV 126

Query: 553 VKVYLANLRLKGVGTDVLITAYEPIVISPFSESARTAGAGLAVPAMQSGCMQMADVFKLA 374
           V+VYLAN+RLKGV +DVLITAYEP++I P SE+ART GAG+A+PA QSG + M++VFKLA
Sbjct: 127 VRVYLANIRLKGVSSDVLITAYEPVLIHPLSETARTVGAGMAIPAAQSGFLPMSEVFKLA 186

Query: 373 VSSFKVQDWNLFGS 332
           VS+FKV DWNLFGS
Sbjct: 187 VSTFKVNDWNLFGS 200


>ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycine max]
           gi|255642279|gb|ACU21404.1| unknown [Glycine max]
          Length = 198

 Score =  284 bits (727), Expect = 3e-74
 Identities = 137/189 (72%), Positives = 162/189 (85%)
 Frame = -2

Query: 904 PLFGGAIWSTFPLRFQDVSNIRQVPDHQEVYVDPSRDESLIVELLELKQEVQDSASVAWF 725
           PLFGG I STFP RFQDVS+IRQVPDHQEV+ DPSRDESLI ELLE K +V D+ S  WF
Sbjct: 10  PLFGGKISSTFPHRFQDVSSIRQVPDHQEVFADPSRDESLIFELLEFKPDVADNGSAGWF 69

Query: 724 FQDLAREQDAQGSIVVEQSGIVELDGLRFRNMPAIMTTAVGQMSVSKGKQGREAQNVVKV 545
            QDLA EQDA+GS+V+EQSG++E  GL + N PA++TTAVGQM++SKG+QGREAQN+VKV
Sbjct: 70  LQDLASEQDAEGSVVIEQSGVLEAPGLMYNNTPAVVTTAVGQMAISKGRQGREAQNIVKV 129

Query: 544 YLANLRLKGVGTDVLITAYEPIVISPFSESARTAGAGLAVPAMQSGCMQMADVFKLAVSS 365
           YLANLRL+GV TDVL++AYEPIVI+P SESA T GAG+AVPA Q+GCM M +VFKLAV+S
Sbjct: 130 YLANLRLRGVDTDVLVSAYEPIVINPLSESADTVGAGVAVPAAQAGCMPMDEVFKLAVTS 189

Query: 364 FKVQDWNLF 338
           F+V DW LF
Sbjct: 190 FRVHDWGLF 198