BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014269
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   139   9e-31
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   135   2e-29
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   134   4e-29
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...   132   8e-29
ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitoch...   131   2e-28

>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  139 bits (350), Expect = 9e-31
 Identities = 96/202 (47%), Positives = 115/202 (56%), Gaps = 12/202 (5%)
 Frame = -3

Query: 782 MKHFRLISPFLNPTNIKSKPHFLSPWNHACFARESTL--SPEEETKFT----------PS 639
           M+HFRLISP L+      K  F +P     F  +ST+  SP    +FT          PS
Sbjct: 1   MRHFRLISPHLSRIR---KTLFRNP----TFNPQSTIPRSPNLIYQFTSIAQEPNPPAPS 53

Query: 638 ENVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXMXXXXXXXXXXXXX 459
           + V+A+VDE+SE    E+ DL E+LR    I   +           M             
Sbjct: 54  DKVAALVDEISELTLLEISDLTEVLRNKLDI---KEMPVMAVMMPGMGFSGMKGGVKGGA 110

Query: 458 XXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKGV 279
                      KT FD+KLEGF+AA+KIK+IKEVR FTDLGLKEAKDLVEKAPTLLKKGV
Sbjct: 111 AGAAKAEEKVEKTVFDVKLEGFDAAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLKKGV 170

Query: 278 TKEEAQKIIDKMKEIGAKVVME 213
           TKEEA+KI  KMKE+GAKV ME
Sbjct: 171 TKEEAEKITAKMKEVGAKVSME 192


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  135 bits (339), Expect = 2e-29
 Identities = 95/200 (47%), Positives = 110/200 (55%), Gaps = 10/200 (5%)
 Frame = -3

Query: 782 MKHFRLISPFLNPT---NIKSKPHF---LSP----WNHACFARESTLSPEEETKFTPSEN 633
           M++F  I P L+      I   P F   L+P    WN   F  + T S +      PSE 
Sbjct: 1   MRYFGSIVPQLSRNLKLRITQNPTFCDSLNPNSHLWNRLNFVLKYTSSAQ-----VPSER 55

Query: 632 VSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXMXXXXXXXXXXXXXXX 453
           VS+IVDE+S     E+ DL E+LRK   IN              M               
Sbjct: 56  VSSIVDEISGLTLLEVSDLTELLRKKLDIN------EMPVMAVMMPGMGFGVRGAGGAAP 109

Query: 452 XXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKGVTK 273
                    KTAFDLKLE F+AA+KIKIIKEVRTFTDLGLKEAKDLVE APTLLKKGV K
Sbjct: 110 KAAEVKAAEKTAFDLKLEAFDAAAKIKIIKEVRTFTDLGLKEAKDLVEHAPTLLKKGVPK 169

Query: 272 EEAQKIIDKMKEIGAKVVME 213
           EEA+ II+KMK +GAKV ME
Sbjct: 170 EEAENIIEKMKAVGAKVTME 189


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  134 bits (336), Expect = 4e-29
 Identities = 91/185 (49%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
 Frame = -3

Query: 761 SPFLNPTNIKSKPHFLSPW--NHACFARESTLSPEEETKFTPSENVSAIVDELSEFNSTE 588
           SP     N      F SP   NH  +   +T SPE      PSE VSAIVDE+S     E
Sbjct: 26  SPSTRHINFPGLETFASPSSVNHRNY---TTASPESRP--APSERVSAIVDEISGLTLLE 80

Query: 587 LMDLVEILRKNAGINLNEXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXKTAFDL 408
           + DL E+LR+   +   +           M                        KTAFD+
Sbjct: 81  VADLTEVLREKLDV---KEMPVMTMMMPGMGFGGFRGAGKGGPGAKGVEEKKEEKTAFDV 137

Query: 407 KLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGA 228
           KL+ F+AASKIKIIKEVRTFT+LGLKEAKDLVEKAPTLLKKGVTKEEA+ II KMKE+GA
Sbjct: 138 KLDAFDAASKIKIIKEVRTFTNLGLKEAKDLVEKAPTLLKKGVTKEEAETIIAKMKEVGA 197

Query: 227 KVVME 213
           KV ME
Sbjct: 198 KVSME 202


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score =  132 bits (333), Expect = 8e-29
 Identities = 88/193 (45%), Positives = 108/193 (55%), Gaps = 6/193 (3%)
 Frame = -3

Query: 773 FRLISPFLNPTNIKSKPHFLSPWNHA------CFARESTLSPEEETKFTPSENVSAIVDE 612
           F+ +S FL        P F+SP            ARE + S   +++   SE V+AIVDE
Sbjct: 7   FKHLSHFLKTLTRPQNPTFVSPRISQNPRPLPFHARECSSSSASQSQ--GSEKVAAIVDE 64

Query: 611 LSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXX 432
           L      E+MDLVE++R+  G+N              M                      
Sbjct: 65  LMGLTLLEVMDLVEVMREKRGVN---ELPIAMLMVPGMGVPRGVPNGGGGGAAGVAEVKA 121

Query: 431 XXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKGVTKEEAQKII 252
             KT FD+KLEGF+AA+KIK+IKEVRTFT LGLKEAKDLVEK P +LKKGVTKEEA+ II
Sbjct: 122 VEKTVFDVKLEGFDAATKIKVIKEVRTFTSLGLKEAKDLVEKVPAMLKKGVTKEEAESII 181

Query: 251 DKMKEIGAKVVME 213
            KMKE+GAKV ME
Sbjct: 182 AKMKEVGAKVSME 194


>ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Glycine
           max]
          Length = 199

 Score =  131 bits (329), Expect = 2e-28
 Identities = 75/143 (52%), Positives = 89/143 (62%)
 Frame = -3

Query: 641 SENVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXMXXXXXXXXXXXX 462
           SE V+AIVDE+      E+MDLVE++R+  G+N                           
Sbjct: 57  SEKVAAIVDEVMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGVPRGIPRGAAKGGG 116

Query: 461 XXXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKG 282
                       KTAFD+KLEGF+AA+KIK+IKEVRTFT LGLKEAKDLVEK P +LKKG
Sbjct: 117 AATGGAEVKAAEKTAFDVKLEGFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPAVLKKG 176

Query: 281 VTKEEAQKIIDKMKEIGAKVVME 213
           VTKEEA+ II KMKE+GAKV ME
Sbjct: 177 VTKEEAESIIAKMKEVGAKVSME 199