BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014261
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    60   5e-11
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    65   7e-11
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    65   9e-11
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    65   9e-11
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...    65   9e-11

>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 60.1 bits (144), Expect(2) = 5e-11
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -2

Query: 195 KKGAAGCMAINLGMSKAFDRVEWSFLLETLEAFGLCEKWRNLIKQCISTTSLSFKLNG 22
           K+G  G  AI L MSKA+DRVEWSFL + +   G   +W NL+  C+++ S   K+NG
Sbjct: 258 KRGKMGYAAIKLDMSKAYDRVEWSFLRDMMLWLGFNAEWINLVMHCVTSVSYKIKVNG 315



 Score = 32.0 bits (71), Expect(2) = 5e-11
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 284 ISPSQSAFVKGR*IFDNIVLAMRLLGLSSERK 189
           ISP+QSAFV GR I DNI++A  +      +K
Sbjct: 227 ISPTQSAFVPGRLISDNILVAYEMTHYMRSKK 258


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 65.1 bits (157), Expect(2) = 7e-11
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -2

Query: 225 SHEIIRTLK*KKGAAGC-MAINLGMSKAFDRVEWSFLLETLEAFGLCEKWRNLIKQCIST 49
           +HEI+  L+       C MAI   MSKA+DR++W+FL E L   G  +KW   + QC+ T
Sbjct: 494 THEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCT 553

Query: 48  TSLSFKLNGYPTG 10
            S SF +NG P G
Sbjct: 554 VSYSFLINGSPQG 566



 Score = 26.6 bits (57), Expect(2) = 7e-11
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 284 ISPSQSAFVKGR*IFDNIVLAMRLL 210
           IS  QSAFV GR I DN+++   +L
Sbjct: 474 ISLHQSAFVPGRAIADNVLITHEIL 498


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 65.5 bits (158), Expect(2) = 9e-11
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = -2

Query: 195 KKGAAGCMAINLGMSKAFDRVEWSFLLETLEAFGLCEKWRNLIKQCISTTSLSFKLNGYP 16
           + G  G  AI L MSKA+DRVEW FLL  L   G  EKW  LI  C++T +   K+NG  
Sbjct: 85  RNGKDGYAAIKLDMSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDY 144

Query: 15  TGLLK 1
           T ++K
Sbjct: 145 TEVIK 149



 Score = 25.8 bits (55), Expect(2) = 9e-11
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 284 ISPSQSAFVKGR*IFDNIVLA 222
           I  +QSAFV GR I DN+++A
Sbjct: 54  ILDTQSAFVPGRLITDNVLIA 74


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 65.5 bits (158), Expect(2) = 9e-11
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = -2

Query: 195 KKGAAGCMAINLGMSKAFDRVEWSFLLETLEAFGLCEKWRNLIKQCISTTSLSFKLNGYP 16
           + G  G  AI L MSKA+DRVEW FLL  L   G  EKW  LI  C++T +   K+NG  
Sbjct: 85  RNGKDGYAAIKLDMSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDY 144

Query: 15  TGLLK 1
           T ++K
Sbjct: 145 TEVIK 149



 Score = 25.8 bits (55), Expect(2) = 9e-11
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 284 ISPSQSAFVKGR*IFDNIVLA 222
           I  +QSAFV GR I DN+++A
Sbjct: 54  ILDTQSAFVPGRLITDNVLIA 74


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score = 65.5 bits (158), Expect(2) = 9e-11
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = -2

Query: 195 KKGAAGCMAINLGMSKAFDRVEWSFLLETLEAFGLCEKWRNLIKQCISTTSLSFKLNGYP 16
           + G  G  AI L MSKA+DRVEW FLL  L   G  EKW  LI  C++T +   K+NG  
Sbjct: 85  RNGKDGYAAIKLDMSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDY 144

Query: 15  TGLLK 1
           T ++K
Sbjct: 145 TEVIK 149



 Score = 25.8 bits (55), Expect(2) = 9e-11
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 284 ISPSQSAFVKGR*IFDNIVLA 222
           I  +QSAFV GR I DN+++A
Sbjct: 54  ILDTQSAFVPGRLITDNVLIA 74