BLASTX nr result

ID: Coptis24_contig00014240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014240
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi...   108   6e-22
emb|CBI27714.3| unnamed protein product [Vitis vinifera]              108   6e-22
gb|ABF95004.1| aminotransferase, classes I and II family protein...   101   8e-21
ref|NP_001049576.1| Os03g0252800 [Oryza sativa Japonica Group] g...   101   8e-21
gb|AFW88963.1| hypothetical protein ZEAMMB73_524627 [Zea mays]        101   2e-20

>ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera]
          Length = 480

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   ENKRASKIRRYIVVEAIYQNSGQIAPLDVIIRLKEKFRFRVLLDESNSFGVLGSSGRGL 178
           ENKRA K+RRYIVVEA+YQNSGQIAPLD IIRLKEK+RFRVLLDESNSFGVLGS+GRGL
Sbjct: 235 ENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGSTGRGL 293


>emb|CBI27714.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   ENKRASKIRRYIVVEAIYQNSGQIAPLDVIIRLKEKFRFRVLLDESNSFGVLGSSGRGL 178
           ENKRA K+RRYIVVEA+YQNSGQIAPLD IIRLKEK+RFRVLLDESNSFGVLGS+GRGL
Sbjct: 238 ENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGSTGRGL 296


>gb|ABF95004.1| aminotransferase, classes I and II family protein, expressed [Oryza
           sativa Japonica Group] gi|108707210|gb|ABF95005.1|
           aminotransferase, classes I and II family protein,
           expressed [Oryza sativa Japonica Group]
          Length = 495

 Score =  101 bits (251), Expect(2) = 8e-21
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +2

Query: 5   NKRASKIRRYIVVEAIYQNSGQIAPLDVIIRLKEKFRFRVLLDESNSFGVLGSSGRGL 178
           NKRA KIRRYIVVE+IYQNSGQIAPLD I+RLKEK+RFRV+L+ES+SFGVLG SGRGL
Sbjct: 241 NKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGQSGRGL 298



 Score = 23.9 bits (50), Expect(2) = 8e-21
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 177 LTEHYGVPVD 206
           L EHYGVP+D
Sbjct: 298 LAEHYGVPID 307


>ref|NP_001049576.1| Os03g0252800 [Oryza sativa Japonica Group]
           gi|122247276|sp|Q10P01.1|LCB1A_ORYSJ RecName: Full=Long
           chain base biosynthesis protein 1a
           gi|108707207|gb|ABF95002.1| aminotransferase, classes I
           and II family protein, expressed [Oryza sativa Japonica
           Group] gi|113548047|dbj|BAF11490.1| Os03g0252800 [Oryza
           sativa Japonica Group] gi|125543143|gb|EAY89282.1|
           hypothetical protein OsI_10783 [Oryza sativa Indica
           Group] gi|125585633|gb|EAZ26297.1| hypothetical protein
           OsJ_10166 [Oryza sativa Japonica Group]
           gi|215694563|dbj|BAG89556.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215695394|dbj|BAG90585.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 485

 Score =  101 bits (251), Expect(2) = 8e-21
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +2

Query: 5   NKRASKIRRYIVVEAIYQNSGQIAPLDVIIRLKEKFRFRVLLDESNSFGVLGSSGRGL 178
           NKRA KIRRYIVVE+IYQNSGQIAPLD I+RLKEK+RFRV+L+ES+SFGVLG SGRGL
Sbjct: 241 NKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGQSGRGL 298



 Score = 23.9 bits (50), Expect(2) = 8e-21
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 177 LTEHYGVPVD 206
           L EHYGVP+D
Sbjct: 298 LAEHYGVPID 307


>gb|AFW88963.1| hypothetical protein ZEAMMB73_524627 [Zea mays]
          Length = 324

 Score =  101 bits (251), Expect(2) = 2e-20
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +2

Query: 5   NKRASKIRRYIVVEAIYQNSGQIAPLDVIIRLKEKFRFRVLLDESNSFGVLGSSGRGL 178
           NKRA KIRRYIVVE+IYQNSGQIAPLD I+RLKEK+RFRV+L+ES+SFGVLG SGRGL
Sbjct: 241 NKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGL 298



 Score = 22.7 bits (47), Expect(2) = 2e-20
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 LTEHYGVPVDDYGQ 218
           L EHYGVPV  + Q
Sbjct: 298 LAEHYGVPVSVWPQ 311


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