BLASTX nr result

ID: Coptis24_contig00014237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014237
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305910.1| predicted protein [Populus trichocarpa] gi|2...   343   5e-92
ref|XP_003548162.1| PREDICTED: UPF0326 protein At4g17486-like [G...   339   5e-91
ref|XP_003533983.1| PREDICTED: UPF0326 protein At4g17486-like [G...   331   1e-88
ref|XP_004140760.1| PREDICTED: deSI-like protein At4g17486-like ...   330   2e-88
ref|XP_002273259.1| PREDICTED: UPF0326 protein At4g17486-like [V...   329   5e-88

>ref|XP_002305910.1| predicted protein [Populus trichocarpa] gi|222848874|gb|EEE86421.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  343 bits (879), Expect = 5e-92
 Identities = 168/243 (69%), Positives = 190/243 (78%)
 Frame = -1

Query: 934 TEVALHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDEEWSFGFCEQGS 755
           TEV LH+YDVTNSGS+KTNNTI+ INKIFKD IGLGGIFHSAVQ++GD+EWSFGFCEQG+
Sbjct: 2   TEVILHVYDVTNSGSEKTNNTILNINKIFKDAIGLGGIFHSAVQIHGDDEWSFGFCEQGT 61

Query: 754 GVFSCPPSKNPMYTYRERMVLGKTDCSIFEVNQILRELSREWPGSSYDLLSRNCNHFCDE 575
           GVFSCP SKNPMYTYRE++VLGKT CSIF+VNQILRELSREWPG +YDLL++NCNHFCDE
Sbjct: 62  GVFSCPSSKNPMYTYREKIVLGKTSCSIFKVNQILRELSREWPGDAYDLLAKNCNHFCDE 121

Query: 574 LCERLGVPKLPGWVNRFANAGDAAMEVAGNTAVRLRQXXXXXXXXXXXAYRFLSGVTNNX 395
            CERLGVPKLPGWVNRFANAGDAAMEVAGNTA R RQ           AYRFL GVT+N 
Sbjct: 122 FCERLGVPKLPGWVNRFANAGDAAMEVAGNTAFRFRQAKTEIVSASKVAYRFLVGVTSN- 180

Query: 394 XXXXXXXXXXXXXSRDAPRIQATWFRNLMSMGTKPSTSEIEANNEDRTELPQQSREKVGQ 215
                        +R  PR Q TWF+NL++ G KPS+S  E +N+D   L QQ R K G 
Sbjct: 181 --NGSGLESPENSNRGVPRFQGTWFKNLIANGAKPSSS-TEVDNQDENMLLQQQRIKQGA 237

Query: 214 NSL 206
           + L
Sbjct: 238 DQL 240


>ref|XP_003548162.1| PREDICTED: UPF0326 protein At4g17486-like [Glycine max]
          Length = 245

 Score =  339 bits (870), Expect = 5e-91
 Identities = 167/239 (69%), Positives = 185/239 (77%), Gaps = 2/239 (0%)
 Frame = -1

Query: 934 TEVALHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDEEWSFGFCEQGS 755
           T+V LHIYDVTNSGS+KTNNTIVQINKIFKDGIGLGGIFHSAVQV+GD+EWSFGFCEQG+
Sbjct: 2   TDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVFGDDEWSFGFCEQGT 61

Query: 754 GVFSCPPSKNPMYTYRERMVLGKTDCSIFEVNQILRELSREWPGSSYDLLSRNCNHFCDE 575
           GVFSCP  KNPMYTYRE +VLGKT+CSIF+VNQILRELSREWPGSSYDLLS+NCNHFCDE
Sbjct: 62  GVFSCPSGKNPMYTYRESIVLGKTNCSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDE 121

Query: 574 LCERLGVPKLPGWVNRFANAGDAAMEVAGNTAVRLRQXXXXXXXXXXXAYRFLSGVTNNX 395
            CERLGVPKLPGWVNRFANAGD AMEVAGNTA+R RQ           AYRFL GVTNN 
Sbjct: 122 FCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNV 181

Query: 394 XXXXXXXXXXXXXSR--DAPRIQATWFRNLMSMGTKPSTSEIEANNEDRTELPQQSREK 224
                        S    +PR+QA+W +N+++ G KPSTS    N      LP    +K
Sbjct: 182 TNNVKNGPESPDNSNRGGSPRLQASWLKNIVTNGAKPSTSSEAENQNGVMPLPPTRDDK 240


>ref|XP_003533983.1| PREDICTED: UPF0326 protein At4g17486-like [Glycine max]
          Length = 248

 Score =  331 bits (849), Expect = 1e-88
 Identities = 167/247 (67%), Positives = 190/247 (76%), Gaps = 2/247 (0%)
 Frame = -1

Query: 934 TEVALHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDEEWSFGFCEQGS 755
           T+V LHIYDVTNSGS+KTN+TIVQINKIFKDGIGLGGIFHSAVQV+GD+EWSFGFCEQG+
Sbjct: 2   TDVVLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVFGDDEWSFGFCEQGT 61

Query: 754 GVFSCPPSKNPMYTYRERMVLGKTDCSIFEVNQILRELSREWPGSSYDLLSRNCNHFCDE 575
           GVFSCP  KNPMYTYRE +VLGKT+ SIF++NQILRELSREWPGSSYDLLS+NCNHFCDE
Sbjct: 62  GVFSCPSGKNPMYTYRESIVLGKTNFSIFKLNQILRELSREWPGSSYDLLSKNCNHFCDE 121

Query: 574 LCERLGVPKLPGWVNRFANAGDAAMEVAGNTAVRLRQXXXXXXXXXXXAYRFLSGVTNNX 395
            CERLGVPKLPGWVNRFANAGD AMEVAGNTA+R RQ           AYRFL GVTNN 
Sbjct: 122 FCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNV 181

Query: 394 XXXXXXXXXXXXXSR--DAPRIQATWFRNLMSMGTKPSTSEIEANNEDRTELPQQSREKV 221
                        S    +PR+Q +W +N+++ G KPSTS  EA N++   +P     + 
Sbjct: 182 TNNVKNGPETPNNSNRGGSPRLQGSWLKNIITNGAKPSTSS-EAENQNGV-MPLPPTRED 239

Query: 220 GQNSLHS 200
            Q  LHS
Sbjct: 240 DQALLHS 246


>ref|XP_004140760.1| PREDICTED: deSI-like protein At4g17486-like [Cucumis sativus]
           gi|449485477|ref|XP_004157182.1| PREDICTED: deSI-like
           protein At4g17486-like [Cucumis sativus]
          Length = 251

 Score =  330 bits (847), Expect = 2e-88
 Identities = 162/233 (69%), Positives = 180/233 (77%)
 Frame = -1

Query: 934 TEVALHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDEEWSFGFCEQGS 755
           T+V LHIYDVTNSGSDKTNNTIV INKIFKDGIGLGGIFHSAVQVYGD+EWSFGFCEQG+
Sbjct: 2   TDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGT 61

Query: 754 GVFSCPPSKNPMYTYRERMVLGKTDCSIFEVNQILRELSREWPGSSYDLLSRNCNHFCDE 575
           GVFSCP  +NPMYTYRE + LG+T+CSIF+VNQILRELSREWPGSSYDLLSRNCNHFCD+
Sbjct: 62  GVFSCPSGQNPMYTYRESINLGRTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQ 121

Query: 574 LCERLGVPKLPGWVNRFANAGDAAMEVAGNTAVRLRQXXXXXXXXXXXAYRFLSGVTNNX 395
            CE L V KLPGWVNRFANAGDAA+EVAGNTAVR +Q           AYRFL G TNN 
Sbjct: 122 FCEMLNVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFLLGATNN- 180

Query: 394 XXXXXXXXXXXXXSRDAPRIQATWFRNLMSMGTKPSTSEIEANNEDRTELPQQ 236
                        +R  PR QA WF+NL++ G KPS+S    N  + T+  QQ
Sbjct: 181 --VMSSPESTSNSNRGTPRFQAAWFKNLITTGAKPSSSSELGNQVEGTQQQQQ 231


>ref|XP_002273259.1| PREDICTED: UPF0326 protein At4g17486-like [Vitis vinifera]
          Length = 247

 Score =  329 bits (844), Expect = 5e-88
 Identities = 164/230 (71%), Positives = 183/230 (79%), Gaps = 3/230 (1%)
 Frame = -1

Query: 937 TTEVALHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDEEWSFGFCEQG 758
           T EV LHIYDVTNSGS+KTNNTIVQINKIFKDGIGLGGIFHSAVQVYGD+EWSFGFCEQG
Sbjct: 4   TMEVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQG 63

Query: 757 SGVFSCPPSKNPMYTYRERMVLGKTDCSIFEVNQILRELSREWPGSSYDLLSRNCNHFCD 578
           +GVFSCP SKNPMYTYRE +VLG+T+ SIF+VNQILRELSREWPGSSYDLL++NCNHFCD
Sbjct: 64  TGVFSCPASKNPMYTYRECIVLGRTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCD 123

Query: 577 ELCERLGVPKLPGWVNRFANAGDAAMEVAGNTAVRLRQXXXXXXXXXXXAYRFLSGVTNN 398
           ELCE+LGVPKLPGWVNRFANAGDAAMEVAGNTA+R RQ           AYRFL GVT+N
Sbjct: 124 ELCEKLGVPKLPGWVNRFANAGDAAMEVAGNTALRFRQAKTEIVTASKVAYRFLLGVTSN 183

Query: 397 XXXXXXXXXXXXXXSRDAPRIQATWFRNLM---SMGTKPSTSEIEANNED 257
                         +R  PR Q  WF++L+   + G +PS+S    N ED
Sbjct: 184 ---SAVTPESPSNSNRATPRFQGAWFKSLVPSGATGARPSSSSEIENQED 230


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