BLASTX nr result

ID: Coptis24_contig00014236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014236
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284754.1| PREDICTED: protein SYS1 homolog [Vitis vinif...    93   6e-17
ref|XP_002528192.1| conserved hypothetical protein [Ricinus comm...    86   5e-15
gb|AFK43804.1| unknown [Lotus japonicus]                               86   7e-15
ref|XP_004141851.1| PREDICTED: protein SYS1 homolog [Cucumis sat...    84   3e-14
ref|XP_002304184.1| predicted protein [Populus trichocarpa] gi|2...    83   5e-14

>ref|XP_002284754.1| PREDICTED: protein SYS1 homolog [Vitis vinifera]
           gi|297743295|emb|CBI36162.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   GGWPSTITWWVVNGTCLAVMALLGEWLCIRRELREIPITRYRSNV 136
           GGWPS+ITWWVVNGTCLA+MALLGE+LCIRREL EIPITRYRSNV
Sbjct: 108 GGWPSSITWWVVNGTCLAMMALLGEYLCIRRELLEIPITRYRSNV 152


>ref|XP_002528192.1| conserved hypothetical protein [Ricinus communis]
           gi|223532404|gb|EEF34199.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +2

Query: 2   GGWPSTITWWVVNGTCLAVMALLGEWLCIRRELREIPITRYRSNV 136
           GGWPS++TWWVV+GT LAVMALLGE+LCIRREL+EIPITRYRS V
Sbjct: 66  GGWPSSVTWWVVSGTGLAVMALLGEYLCIRRELKEIPITRYRSRV 110


>gb|AFK43804.1| unknown [Lotus japonicus]
          Length = 152

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +2

Query: 2   GGWPSTITWWVVNGTCLAVMALLGEWLCIRRELREIPITRYRSNV 136
           GGWPS ITWW+VNGT +AVMALLGE+LCIRREL+EIPITR RSNV
Sbjct: 108 GGWPSAITWWIVNGTGIAVMALLGEYLCIRRELQEIPITRLRSNV 152


>ref|XP_004141851.1| PREDICTED: protein SYS1 homolog [Cucumis sativus]
           gi|449522538|ref|XP_004168283.1| PREDICTED: protein SYS1
           homolog [Cucumis sativus]
          Length = 151

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +2

Query: 2   GGWPSTITWWVVNGTCLAVMALLGEWLCIRRELREIPITRYRSNV 136
           GGWPS++TWWVVNGT L VM+LLGE+LCI+RELREIPITR RSNV
Sbjct: 107 GGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 151


>ref|XP_002304184.1| predicted protein [Populus trichocarpa] gi|222841616|gb|EEE79163.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = +2

Query: 2   GGWPSTITWWVVNGTCLAVMALLGEWLCIRRELREIPITRYRSNV 136
           GGWPS+ITWWVVNGT  AVMALLGE+LCI+RELREIP TRYRSNV
Sbjct: 108 GGWPSSITWWVVNGTGFAVMALLGEYLCIKRELREIP-TRYRSNV 151


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