BLASTX nr result
ID: Coptis24_contig00014224
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014224 (242 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25... 102 2e-20 ref|XP_002523999.1| Protein AFR, putative [Ricinus communis] gi|... 98 6e-19 ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm... 94 1e-17 ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17 >ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max] Length = 375 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%) Frame = -1 Query: 242 VLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVYLASGVGSSGY 63 VLLAATTH+ PAL PLIF+P TKTW GP+ STPRRWCA GS+G +VY+ASG+GS + Sbjct: 139 VLLAATTHNLSPALPRPLIFHPLTKTWSFGPTLSTPRRWCALGSLGPTVYVASGIGSH-F 197 Query: 62 TQDLAQSAEKWNVL--NGTWEK 3 + +A+S +KWN+ N WEK Sbjct: 198 SIHVARSLQKWNLQNPNAVWEK 219 >ref|XP_002523999.1| Protein AFR, putative [Ricinus communis] gi|223536726|gb|EEF38367.1| Protein AFR, putative [Ricinus communis] Length = 378 Score = 98.2 bits (243), Expect = 6e-19 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 4/84 (4%) Frame = -1 Query: 242 VLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVYLASGVGSSGY 63 VL+A TH +PALS PL+F+P + W GP F+TPRRWCATGSV N+VYLASGVG Y Sbjct: 138 VLIAGATHRLVPALSRPLLFHPQSNRWFFGPPFTTPRRWCATGSVNNTVYLASGVGLQ-Y 196 Query: 62 TQDLAQSAEKW----NVLNGTWEK 3 D+A+S EKW N WEK Sbjct: 197 NGDVARSMEKWDMKDNKTKWKWEK 220 >ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1| predicted protein [Populus trichocarpa] Length = 397 Score = 96.7 bits (239), Expect = 2e-18 Identities = 43/75 (57%), Positives = 56/75 (74%) Frame = -1 Query: 242 VLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVYLASGVGSSGY 63 +LLAAT+H F PALS PL+FNP + +W GP +TPRRWCA GS +VY+ASG+GS Y Sbjct: 147 ILLAATSHSFSPALSRPLVFNPLSGSWAFGPPLATPRRWCAAGSAHGTVYVASGIGSQ-Y 205 Query: 62 TQDLAQSAEKWNVLN 18 D+A+S EKW++ N Sbjct: 206 NTDVAKSLEKWDLQN 220 >ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis] gi|223528465|gb|EEF30497.1| conserved hypothetical protein [Ricinus communis] Length = 399 Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%) Frame = -1 Query: 242 VLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNS-VYLASGVGSSG 66 +LLAATT +F PALS P IFNP ++ W GP +TPRRWCA G++ NS VY+ASG+GS Sbjct: 142 ILLAATTDNFYPALSRPFIFNPVSRRWSFGPPLTTPRRWCAAGAINNSTVYVASGIGSQ- 200 Query: 65 YTQDLAQSAEKWNVL 21 ++ D+A+S EKW L Sbjct: 201 FSADIAKSVEKWEFL 215 >ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1| predicted protein [Populus trichocarpa] Length = 399 Score = 92.8 bits (229), Expect = 3e-17 Identities = 39/73 (53%), Positives = 56/73 (76%) Frame = -1 Query: 242 VLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVYLASGVGSSGY 63 +L+AAT+H+F PALS PL+FNP + W GP +TPRRWCA GS ++VY+ASG+GS + Sbjct: 149 ILIAATSHNFSPALSRPLVFNPLSGVWGFGPPLTTPRRWCAAGSAKDTVYVASGIGSQ-F 207 Query: 62 TQDLAQSAEKWNV 24 D+++S EKW++ Sbjct: 208 NTDVSKSVEKWDL 220